Tinamus guttatus (white-throated tinamou): 104566707
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Entry
104566707 CDS
T08560
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04382
Cornified envelope formation
tgt04510
Focal adhesion
tgt04512
ECM-receptor interaction
tgt04518
Integrin signaling
tgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104566707 (COL4A4)
04518 Integrin signaling
104566707 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104566707 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104566707 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104566707 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgt04147
]
104566707 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104566707 (COL4A4)
Exosome [BR:
tgt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104566707 (COL4A4)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104566707 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104566707
NCBI-ProteinID:
XP_010211825
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MALTKDSSAWIKWIITAAWWLLIVFSTQEIDGGEYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGGKGDKGPTGVPGFPGLNGVPGL
PGSEGPLGKRGLDGCNGSRGDPGFPGENGYIGPRGHYGDRGDPGPPGMPGPRGSRGTTGP
SGYPGQPGLPGTPGFPGFPGEQGNPGIGVDGQKGEPGDVGLPGPPGSPLLIGPPGAQLFK
GEKGQKGLPGVTGYRGPRGPKGVSGRGEKGEKGIPGFLGVRGSPGSYGPAGVPGIKGEPG
VAGFPGQVGYPGVKGDPGEKGPPGPPGTVGAPFFPVKGLQGDPGFPGPAGDMGSIGPPGP
AGPLGRPGDDGTSLPGLPGTSGVPGPQGFQGDPGFPGTGESTPGRPGFPGLPGLPGQPGR
PGLPGPPSVICTDRGVPGEPGAKGQTGPPGRKGEKGEKGNQGLCSCSPGPPGVRGIHGPP
GTQGKKGQMGYPGRYGEKGSPGLSGAIGSPGLPGTPGSAGQDGEKGEKGDPGRIRIKGIK
GERGPRGIPGFPGQRGNYGRDGELGLPGEKGDKGDSGVPLLGDKGFPGVPGSPGVKGRMG
LPGLGFPGPPGVRGVPGDFGDPGSAGPPGPKGQKGETVCITPPSPGSPGHPGFKGAQGQK
GLKGLPGRPGPNGFDGQKGQPGRPGAGIPGPQGFRGKAGDPGDEGVRGSTVDGKSGPPGP
PGLDGQKGVPGDTTYGPPGIPGYRGPPGPPGDWSIPVSSLQLVHTCQPGTPGFPGAKGFR
GPEGGIGVPGCPGFPGLPCDRGLPGPPGLRGVLGQPGAQGLQGFKGQRGDRGLVGPPGLK
GLKGSPGSPGPPGPPGSRGVPGSPGDRGAPGFPGQTGSKGIRGPQGFPGLPGIQGPMGIP
GLKGEEGEMGLPGPGGECGDLGIKGERGPPGDSGCITIRLEKGQKGEPGFPGENGLRGGR
GEKGNVGSRGIPGFPGKNGLPGLPGDHGDTGLMGFPGSQGFPGPKGFKGIMGFQGQPGDQ
GDVGLPGIPGKPGLTGPKGPKGEKGDPTVLLGTCGQKGPPGDPGLPGLCGFPGEKGSSGI
QGQPGRPGSKGQPGYPGIPGFPGAMGPQGLPGEPGERGKHGFLGPPGLQGFAGSQGRKGL
PGLPGLDGLDGLKGQKGSPGSPGQSETGIPGYSGEHGPKGDRGEPGWPGISIPGPPGERG
FPGFPGRRGAVGPAGPMGRSPVSAPPGPPGDQGPPGVDGIRGQPGNPGPPGETVFVRGDP
GDVGFRGAPGIPGQRGQQGAKGLPGNHGRRGPKGPMGIPGPHGPPGATGQAGDQGFQGKP
GPPGPSGFIGDPGEPGEIDDSCPTIPGPPGEAGQRGDDGSIGLPGPIGHPGPQGRKGEEG
SCGLPGQDGLPGPPGPPGDQGSTGEQGYTGPQGPPGQTGIPGPPGPQVRSESGFLLVLHS
QSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPIFNTMPFAYCNINQVCY
YASRNDKSYWLSSAAPLPTMPLSEEEIRPYISRCAVCEAPAQAVAVHSQDQSIPPCPLNW
RSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWL
ITVMPELQFASAPLSGTLKEGQEQRKKISRCQVCLKHG
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcatctgcatggattaaatggattatcacagctgcctggtgg
ctgctgattgttttttcaacacaagaaattgatgggggtgaatatgcatatattgatcca
tgcgggggacaggattgttcagtttgtcggtgctttccagaaaaaggatcaagaggtcag
cctggtgagttgggagctcaaggtcccattggatccttgggatctacaggaccagctggt
ctgccaggtgaaaaaggtcagagaggtgagaatgggcaacctgggccagctggaggaaaa
ggtgataagggtcccacaggagtcccgggatttcctggtttaaatggtgttcctggatta
ccaggaagtgaaggacccctgggtaaacgtggtttggatggctgcaatggctcaagagga
gatccaggattcccaggcgaaaatggatacattggaccaagaggtcattatggagacaga
ggtgatcctggacctcctggcatgccaggacctagaggatcaagaggtactacaggccca
tctggatacccaggccaaccaggcttgcctggtacaccaggtttcccaggtttcccaggt
gaacagggaaatccaggcattggagtggatggacagaagggggagccgggtgatgttgga
cttcctgggccaccaggctcaccactgttaattggacctcctggagctcagttgttcaag
ggagaaaagggtcaaaaaggacttcctggggttacgggatatagaggaccacgtggacct
aagggtgtatctgggagaggagaaaagggtgaaaaaggtattcctggattccttggagta
cggggtagtcctggatcttatggacctgcaggggttcctggaataaagggagaaccagga
gttgctggttttcctggacaagttggctatccaggcgtaaagggggatcctggagaaaaa
gggcccccaggtcctcctggaactgttggagctccattctttcctgtaaaaggtctgcag
ggagatcctggatttccaggtcctgctggtgatatggggtcgattggaccacctggccct
gcaggcccactaggaagaccaggagatgatggaacaagtctgcctggcctgccaggaaca
agtggggtaccaggaccacaaggttttcaaggtgaccctggtttccctggaacaggtgaa
tcaaccccaggaagaccaggatttcctgggctgccaggattaccaggacagccaggaaga
ccaggattacctgggccacccagtgtaatttgtactgacagaggagtacctggagaacct
ggagcaaaaggtcagacaggccctccaggaaggaaaggtgaaaaaggagaaaagggaaat
caaggcctctgctcatgtagtcctggtcctcctggtgtccgtggtatacatggacctcca
ggtactcaaggaaagaaaggacaaatgggataccctggaagatatggagaaaaaggcagt
ccaggcttatctggtgcaataggatcaccagggctccctggaacacctggttctgctggg
caagatggtgaaaaaggagagaaaggtgacccaggaagaattagaataaaaggaataaaa
ggagaaagaggtcctagagggattccaggatttccaggccaaagaggaaattatggcaga
gatggggaattaggattgcctggagagaaaggagacaagggtgactctggagtaccactg
ctgggtgacaaagggttccctggggtcccagggagtcctggggtgaaaggacgtatggga
ctgcctggcctgggctttcctggccccccaggagtccgaggagtgcctggggacttcggg
gatcctggtagtgctgggccacctgggccaaagggtcagaaaggtgagacagtttgtatt
actccaccatcccctggaagtccagggcacccaggttttaaaggtgctcaaggacaaaag
ggtttaaaaggactccctggtcgtcccggaccaaatggctttgatgggcagaaaggccag
ccaggcagaccaggagcaggaatccctgggccgcaaggctttcgaggaaaagctggtgat
cctggtgatgagggtgtaagaggatctacggttgatggtaaaagtggtcctccaggtcca
cccggcttagatggtcagaagggtgttccaggtgataccacatatggtcctccaggaatc
ccaggctatagaggaccgccaggaccacctggagactggtccatacctgtgagctctctg
cagctggtccatacctgccagcctggcactccaggatttccaggagccaaaggttttaga
ggcccagaaggtggtataggagtaccaggctgtccaggcttccctggtctcccatgtgac
aggggcttgccagggccaccaggactcagaggtgtcttaggccaaccaggcgctcaagga
ttacaaggctttaaaggtcagagaggagacagaggccttgtaggaccacctggcctgaaa
ggtctcaaaggctctcctggctccccggggcccccaggacctccaggctcccgcggagtt
ccaggatctcctggggataggggagcacctggtttcccaggccaaacaggaagcaaaggg
attcgaggacctcaaggattcccaggactcccaggaatacaagggccaatgggaatccct
ggtttaaaaggggaagaaggagaaatgggtctacctggacctggtggagaatgtggggat
ttgggaataaaaggtgaaagaggaccaccaggagacagtggctgcattaccattcgactt
gagaagggacaaaagggggaaccaggttttcctggagagaatggacttagaggtggaaga
ggtgaaaaaggcaatgtcggttccagaggcatcccaggatttccagggaaaaatggtctc
ccaggactgccaggtgaccatggtgacactggactgatggggtttccaggatcacaaggt
tttccaggaccaaagggctttaaaggaattatgggctttcaaggacaaccaggtgaccag
ggtgatgttggcttaccaggaatccctggaaaaccaggattgactggcccaaaaggacct
aaaggtgagaaaggtgatccaactgttctgcttggtacatgtggtcaaaaagggcctcca
ggagatccaggattaccaggactctgtggattcccaggagagaaaggttcatcaggtatc
caagggcaacctggaagaccaggatccaaggggcaacctggatacccaggaatacctgga
tttccaggtgctatgggccctcagggattgccaggagaacctggagaaagggggaaacat
ggatttttaggacctccaggattgcaaggatttgctggttctcaaggcagaaagggtctt
cctggactgcccggactagatggcttggatggactaaaaggtcaaaagggttccccagga
tctccaggtcaaagtgaaacagggatccccggatactcaggagaacatgggccgaaagga
gacagaggtgaacctggatggcctggtatttctattccaggtccccctggagaaaggggg
ttcccaggatttccaggtagaagaggagctgttggacctgctggacctatgggaaggtct
cctgtgagtgctcctcctggtcctccaggtgaccaaggaccacctggtgtagatggcatc
agaggtcagccagggaatcctggccctcctggagagacggtctttgtgcgaggagatcca
ggtgatgttggttttcgaggggcacctgggattcctggacagcgagggcaacaaggagcc
aaaggtcttccagggaaccacggaagaagaggcccaaagggtcctatgggaatccctggc
ccacatggtccacctggtgctacaggacaggcaggggaccaaggttttcaaggaaaacct
ggtcctccaggtccctcaggtttcataggtgaccccggtgaaccaggagaaatagatgac
tcatgccctacaatcccagggccacctggagaagctgggcaaagaggagatgatggttct
ataggattaccagggccgataggccaccctggaccccaaggaagaaaaggtgaagaaggg
tcatgtggcctgccaggtcaggatggcttgcctgggccacctgggcctccaggggaccaa
gggagtacaggagaacaaggatacactgggccacaaggtccacctggccagaccggtatc
ccaggaccaccaggccctcaagttagatctgaaagtggattcttgcttgttctccacagt
cagtcagacagagaaccactctgtccacaggggatgccaaaattatggactggctatagc
ctgttgtacctggaaggacaagagaaagctcataatcaagaccttggtctagctggatct
tgtcttcctatatttaataccatgccttttgcttactgtaacatcaaccaagtttgttat
tacgccagccgaaatgataagtcttactggttgtcaagtgctgctcctctcccaacgatg
ccgctctccgaggaggagatccggccctacataagcagatgtgccgtgtgcgaggcgccg
gcgcaggctgtggccgttcacagccaagaccagtcaattcctccctgcccactgaactgg
agaagtctttggataggatattcctttttgatgcacactggatcgggtgatcagggaggt
ggacagtcccttatgtcacctggaagttgcctagaagacttcagatctgcaccattcatt
gaatgccagggtcagcggggaacatgtcagttttttgcgaacgaatacagtttctggctg
ataacagtgatgcctgaattgcagtttgcatcagcccctctgtcaggaactctcaaagaa
ggacaagagcagagaaaaaaaatcagtaggtgtcaggtgtgcctgaagcatggctaa
DBGET
integrated database retrieval system
