Tinamus guttatus (white-throated tinamou): 104567587
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Entry
104567587 CDS
T08560
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104567587 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgt03041
]
104567587 (CDC40)
Spliceosome [BR:
tgt03041
]
Complex C
Other components
Step II factors
104567587 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
104567587
NCBI-ProteinID:
XP_010212724
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MWGKAREYCEDKQLPASNSCIGRQRGSRFWQWTTDLGHRRAAAAGLELELAPCPVASAAP
ALWRRHHGPRPSGQSLPFSLSNEDVETGVHLDPAIKEVQYNPTYDTMFAPEFGPENPFRT
QQMAAPRNMLSGYAEPAHINDFMFEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEK
NQGLTVFETGQRKIEKRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITA
KRQKRGKLEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQI
HVWSGHTKGVSAVRLFPLSGHIMLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDISFN
NAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIV
QWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWYAAFNTHLCLLPFL
GKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKL
NIWDWKTTKLYSRVKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggaaagctcgtgagtactgcgaagacaagcagctcccagcatcaaactcctgc
atcggccgtcagcggggctcccgcttctggcagtggaccacagaccttgggcatcgccgg
gcggctgctgccgggctggagttggagctcgcgccgtgtcccgtggcgagcgcggcgccg
gctttatggaggcggcaccacggccctcgccccagcggccagagccttcccttctccctc
agcaatgaagatgttgagacaggagtccaccttgatcctgctatcaaggaagttcagtac
aatcccacttatgataccatgtttgctcctgagtttggaccagaaaacccatttaggact
cagcaaatggctgcgcctagaaatatgctttccggatatgcagaaccagctcacatcaat
gatttcatgtttgagcaacaaagaagaacatttgtaacctacggttacgcattagatcct
tctatagataaccctgaagttgctaccaaatatattggttctgtagaagaggctgaaaaa
aatcaaggtttaacagtgtttgagacgggacagaggaaaatagaaaaaaggaagaaattc
aaggagaatgatgcatctaacattgatggcttcttgggaccatgggcaaaatacgttgat
gaaaaagaagtagctaagccctcagaagaagaacagaaagagttggatgaaataacagct
aagaggcagaagagaggaaagctagaggatgataaacctggggaggagaagactatatta
cacgtcaaggaaatgtacgactatcaggggagatcttatcttcatgtccctcaagacgtt
ggagttaatctccgttctacagtgccaccagagaaatgctatcttccaaagaaacaaatc
catgtatggtctggacatacaaagggtgtcagtgcagttagattgtttcctctctctggg
cacataatgttgtcttgctctatggattgcaaaattaagctatgggaggtgtatggtgat
cgaagatgtctacgaacatttattgggcacggtaaagctgttcgagacatctcctttaat
aatgctggcactcgctttcttagtgcagcctacgaccgctacattaaactctgggacacc
gagacagggcagtgtatatcaagattcacaaacaggaaggttccttactgtgtcaaattc
aaccctgatgaagataagcaaaatctctttgttgcaggaatgtcagataagaaaattgtg
cagtgggatattcggagtggtgagattgtgcaggaatacgataggcatttgggagctgtc
aacaccattgtgttcgtggatgaaaatagacggtttgtgagtacatccgatgacaagagt
ttaagagtctgggaatggtatgcagcattcaatacccatctttgtttgctacccttttta
gggaaatggctggcttgtcagtcgatggacaaccaaattctgattttcggagctcagaac
agattcagattaaacaagaagaaaatcttcaaaggtcacatggtagctggctatgcctgt
caagtggatttttcacctgacatgagctatgtgatatccggagatgcagatggaaagctt
aacatctgggactggaagacaacaaaactctacagcagggtgaaagcccatgataaagtc
tgcattggtgctgtctggcacccgcatgaaacctccaaagtcattacgtgcggctgggat
ggccttattaaactgtgggactaa
DBGET
integrated database retrieval system
