Tinamus guttatus (white-throated tinamou): 104567756
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Entry
104567756 CDS
T08560
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104567756 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104567756 (CNOT6)
Enzymes [BR:
tgt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104567756 (CNOT6)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104567756 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104567756 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104567756
NCBI-ProteinID:
XP_010212909
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSDNSLSRIPSDIAKL
HNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLT
QDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMC
YNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYSFFLVE
LKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS
EAMLNRVMTKDNIGVAVLLELRKELIEMSSGKTHLGMEKQLVLVANAHMHWDPDYSDVKL
VQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSGVVEYLSTGGVETN
HKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYI
FYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFLPPVNGIHL
PGRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaattatgtcctcggaggaagcagccaatgggaagaaatcgcactgggcggag
ttggaaataagtgggaaagtgagaagcttaagttcgtcattgtggacactgacccacttg
acagctttgcatctcagtgacaattccttgtcccgtattccttcagacattgccaagctt
cacaatctggtatatctggacctgtcctctaataaaatccgcagtttaccagcagagctc
ggaaacatggtgtcactcagggaactacatttaaataacaacctgttacgagttttacct
tttgagctgggaaaactgttccagttgcagactttgggtctgaaaggaaatccacttacg
caggatattctgaacctttatcaggaaccggatggcacgcgaaggctactgaactatttg
cttgataatttggcaggtactgcaaaaagaatttcaacagaacaaccacctccaagatcc
tggattatgttgcaagaaccagaccgaacaagaccaacagccttgttctctgtcatgtgt
tacaacgtactttgtgataaatacgctacccggcagctgtatggctattgtccatcttgg
gcattgaactgggaatacagaaaaaaagctattatgcaggaaatcctgagctgcaatgct
gacatcataagccttcaggaggttgaaaccgaacagtactacagttttttcctggtagaa
ctgaaagaacgtggctataatggattcttcagtccaaaatctagagctaggacaatgtca
gaacaggaaagaaaacatgttgatggttgtgcaatatttttcaaaacagaaaaatttact
ttggttcaaaaacatactgttgagttcaatcaactagctatggcaaactcagaaggttca
gaagctatgctgaacagagttatgacaaaagataacattggagttgctgttttgctagaa
ctgcggaaggaattgatagaaatgtcatccggaaagacacatcttggaatggaaaagcag
ctagttcttgtagctaatgcacatatgcattgggacccagattattctgatgtgaagctg
gttcagactatgatgttcctgtctgaggtaaagaacattattgataaagcttctcgtagt
ctcaaacctggtgtttcgggagaacttgggaccattccgcttgtactgtgtgcagatctc
aattctctgccagactctggtgtcgttgagtacttgagcactggtggagtggaaacaaac
cacaaagattttaaggaactgagatacaacgaaagtcttactaacttcagctgtaatgga
aagaatggaacaacaaatgggagaattacgcatggtttcaagttgaagagtgcctatgag
aatggcctaatgccttataccaattatacatttgacttcaagggtattatagactacatc
ttctactctaaacctcagctaaacatacttggtattcttggacctttggatcatcattgg
ttaatagagaacaatataagtggttgtccacatccactcatcccttctgaccacttctca
ctttttgcacaactggagcttttgctgcctttcctgcctcctgtaaatggaatccatctc
cctggcaggaggtag
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