Tinamus guttatus (white-throated tinamou): 104568305
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Entry
104568305 CDS
T08560
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04270
Vascular smooth muscle contraction
tgt04625
C-type lectin receptor signaling pathway
tgt04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104568305 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104568305 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
104568305 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgt04131
]
104568305 (ARHGEF12)
Membrane trafficking [BR:
tgt04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104568305 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
104568305
NCBI-ProteinID:
XP_010213496
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDVAAFGHMSPIMTSPHSP
GTSGNAERITSPVLVGEENNVVHNQKVEILRKMLQKEQERLQSLQEECSRSPTSRLLKEI
QXXXXEIFNLLCAVSQLALSFQDGVLSSRSVTESLQISEVEAESGDVLSKLDYSADSSRP
NSDIADSPRSGLKDRIYLDESPEKTEIQDTDSQSSVGSPSSRIGPQIIGAEDDDFDTEQE
QINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVFL
EFYQFFLDRAANLKVPVPDEISVDLDKRRPELIPEELHRHYIQTMQDKVCPEVQKHLEDF
RQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKIEEVLMTSQPLEEDKSST
MQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILGP
PRRPSRHDSSAIGRAMEMQKQRHPKHLSSASSVSPEPPDSSKMRQSGSSSDGQEAVYLPA
NPMSPLAAGPFSSPEGSKDSEAGSKQTVEALPSSDCVDGTPRTPNNTFEFPSPLENLQEE
EGESERMVDMGTPKAFRKVDSVGFADVQSEDELYDFDMDMDPPNWQQLVSRDVLMGLKPY
EIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLHVA
LNDQMKAVRKRNESSVIDQIGEDLLSWFSGSAEEKLKNATATFCSNQPFALEVIKSRQKK
DSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKAA
DHCRQVLNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHEG
PLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLNT
VLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKVESTRRPGS
GPGEEEREEEEQQKLQEQHDISASSPQSSDKDVGLEPPLIPNAESSSPIMSEKSQAGNHR
VTERQFDKVHQADVSLKDSSACFEHTTTNSPSVSEGQWALDALRNLDLLKQLLVQQFGFP
EKGTLEDRQRFPRFRTVSQEAQAESGSEPGLRHSDSDKYPPPAAEQMLPRTSTNESTASY
GLRTSAESPASGDTMQLVAGDPMSSGNLAIDHTSMNLEMSTTELEGVGADESGEHFFDAR
EAHSDENPSESELMERKEDEDVQLRISGNYLILDGYGTVQESSTDEEVSSLVLQCTAGAH
TSLDSARRQTVSPRDTQSDGGSSPFAEEMMASHWGAVEEPCSVVASPHFSIESRMQMMQY
IQKIENDLEKLKEVEEDYTILRRQGLAGSASTGEHSDKS
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctaccagacat
ggcagcattctgagcagagagtctccagctgacaagaagcagaaggttgagcgctgcagt
agtacacacgactttgatcctacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacgtatggtcttgttcaacggtgtgtcgttatccaacgggatgaa
aatggatttgggctgacagtcagtggagacaatccagtctttgtgcagtcagtcaaagaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaatggc
actctagtaacgcactcaaaccatttggaagtggtaaagctgatcaagtcgggttcctat
gtagctctcactgttcaggggcgcccaccagggtccccccagattccattagccgattct
gaagtggatgtggcagcatttgggcatatgtctccaatcatgacatctcctcattcgcct
ggcacatcaggaaatgcagaaaggattactagccctgtactcgtgggggaggagaacaat
gttgtccacaaccagaaagtggagattctgagaaagatgctacagaaagagcaggaacgg
ctgcagtctctgcaagaagagtgtagccgctcgcccacctcacgacttctcaaagagata
cagnnnnnnnnnntagaaatattcaacttgctctgtgctgtctcccaacttgctttatct
tttcaggacggagtcttgtcctctagatctgtaacagaatctctgcagatcagtgaagta
gaggcagaaagtggggatgtcctgagcaaactggattacagtgctgatagctcccgacca
aatagtgacattgctgatagtcctcggagtggcctgaaggatcggatttatctggatgag
agcccagagaagactgagattcaagataccgattctcagtccagtgttggaagtccttct
tctcgtataggacctcagatcattggagcagaagatgacgactttgacactgaacaggaa
cagattaatggacaatgcagctgttttcaaaacattgagctcctgaaatctcgcccagct
cacctggctgttcttctgcatcacgtggtgtcccagtttgaccctgcagcattattatgc
tacctttacacagacttgtataagcagaccaactccaaagagactcgacgtgtcttcctt
gagttttaccagttcttcttggaccgagctgcaaatctgaaagttccagttccagatgaa
atttctgtagatctagacaaaagaaggccagaactcattcccgaagagcttcatcgtcac
tacatacaaactatgcaagacaaagtctgtccagaagttcaaaagcatctggaagatttc
aggcagaagcgtagcatgggattgactctggcagaaggtgaactcaccaaactggatgca
gaaagagttcgtgaccggaatgcagtggagaaggaaagagcatgcgcagaacagatcatt
gccaaaattgaggaagtcttgatgacatctcagcccctggaagaagacaagagttccaca
atgcagtatgtgattcttacttacatgaaacatctgggagtcaaagttaaagagcctcgg
aatctagagcagaagcgtggccgtattggtttcttgccaaagataaagcagagtatcaag
aaagagaaggaaggagaggaaaaagggaagagaagaggcttcccaaatattttgggacca
ccaaggagaccaagtcgacatgatagtagtgcaattggcagagccatggaaatgcagaag
cagcgtcatccaaagcacttatcttcagcctcttctgttagcccagagccaccagattct
agcaagatgcgccagagtgggtcttccagtgatgggcaagaggcagtgtacctgcctgcc
aacccaatgtctcctttggcagcaggtcccttttcctctccagagggaagcaaggacagt
gaagcaggctcgaagcagactgtagaagctctaccttctagcgattgtgtggatggcaca
ccccgcacacctaataatacttttgaattcccatctcctttggaaaacttgcaggaggag
gagggagaatcggagagaatggttgacatgggaacaccaaaggcttttcgcaaggtggat
agtgtgggttttgcagatgtacagagtgaagatgagctgtatgattttgatatggacatg
gaccctcccaactggcagcaacttgtgagccgggatgtgttgatggggctgaaaccctat
gaaatcaagcgccaagaagtgattaatgaattgttttatacagagagagctcatgtccgc
acactgaaggttctgcataatgtcttctaccagcgtgtcacccgggaagggatcctgaac
tccagtgacaaacggaaaatcttttcaaatctggaggatatccttgggcttcatgttgca
ttgaatgatcaaatgaaagctgtccgaaaaaggaacgagtcttctgttattgaccagatt
ggggaggacttgctttcctggtttagtggatcagcagaggagaagttgaaaaatgcaact
gccactttctgcagtaaccagccctttgctttagaggtcatcaaatcacgtcagaagaaa
gactctcgcttccagacttttgtgcaggatgctgagagtaatccactgtgtcgacggttg
cagttgaaggatatcattcccactgagatgcaaaggttgactaagtacccccttctgctt
gataatattgccaagtacacagaactgcctgaagagaaggagaaagtgaagaaagcagca
gatcattgtcgtcaagtccttaatcacgtgaatcaggctgttaaagaatctgagaacaag
cagcatttggaagattatcagcgtcgtcttgacctgtcctacttgaagcagtctgaggat
cccatgatggatgagttcaggaacttggatctgactaagagaaaaatgcttcacgaagga
cctctaacttggaaggttaatcgtgacaaaactattgatctctacaccctgcttctggag
gacattctggtgctattgcagaaacaagatgataaactggttctgaagtgtcacagtaaa
atcttggcatccacagctgacagcaagcacaccttcagtcctatcatcaaactgaacact
gttctggttcgtcaggtggcaacagataacaaagcttttttcgtcatctccatgtcagaa
aatggcgctcatatttatgaactggtggcacagactgtttcagaaaagaatgtatggcaa
gaccttatcgctcagatggcagggactgtaaaagtggagtctaccagaagacctggctca
ggacctggcgaagaagagcgtgaagaagaggagcagcagaagcttcaagagcagcacgac
atttctgccagcagtcctcaaagctcagataaagatgtgggcctcgaacctcccttgata
ccgaatgctgagtcttcttcacccatcatgtctgaaaagtcccaagcaggaaatcatcgt
gtgacagaaagacagtttgataaagtgcatcaggcagacgtgtcacttaaagattcttct
gcgtgctttgaacacacaaccaccaattcaccttcggtatccgaagggcaatgggcactg
gatgcattgaggaatttggacttgctgaagcagctgttggtccagcagtttggctttcct
gaaaaggggacccttgaagaccggcagcgcttccccaggtttagaactgtttcccaagaa
gcccaagctgagagtggaagtgagcctggactacggcactctgacagtgacaaatatccc
ccgcctgcagcagagcagatgcttccaagaaccagcactaatgaatctacggctagttat
ggcctccggacttcagctgaatcaccagcttcgggggataccatgcagctcgtagcagga
gaccccatgtcaagtggcaacttggcaatagaccacacaagtatgaatctggagatgtcc
accacggagctggaaggggtgggtgctgatgaaagtggggaacatttttttgacgctcga
gaagctcacagtgacgaaaatccatctgaaagtgaactaatggaaaggaaggaggacgaa
gatgttcagctacggatctcaggaaattatttgatccttgatggatatggaacagtgcag
gagagctccacagatgaggaggtatcgtccctggttctccagtgcactgcaggtgcccac
acctctttggactctgcacggagacagacggtttccccacgggacacgcagtcggacgga
ggaagctccccgtttgcggaggagatgatggcctcacactggggggcagttgaagagccc
tgctcagttgtagcaagcccgcacttctctatagagtcacggatgcagatgatgcagtat
attcagaagatagagaatgaccttgaaaaattaaaggaggttgaggaagactacaccatt
ctccgtcgccaagggctggctggatcagcctccacaggagagcactcagataaaagttag
DBGET
integrated database retrieval system
