Tinamus guttatus (white-throated tinamou): 104568397
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Entry
104568397 CDS
T08560
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104568397 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgt01009
]
104568397 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgt04515
]
104568397 (PCDH20)
Protein phosphatases and associated proteins [BR:
tgt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104568397 (PCDH20)
Cell adhesion molecules [BR:
tgt04515
]
Cadherins
Protocadherins
104568397 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
104568397
NCBI-ProteinID:
XP_010213593
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MGPPPGSSGARRGRQHLILFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLARDL
RLPTADGQHPLALQPPLSFTLASRGLGDQYVRLDNRSGELHTSALEIDREALCVESSEAT
IIGGAAAASSSSSPSPESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHIHLS
VPENAPVNTRLAIEHPAFDPDMGTNGVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGA
LDREVREEYVTVIVAEDGGTPPLVGSATLTIGISDINDNCPQFNDSQLNVTVYGNSTLGT
HVATVHATDMDLGSNAQITYSYSQKVSQASRDLFRLDESTGVITLSSKVDGDSPRLHRLI
ILGNGPGCIPAVITVLVTIIKVMMRPPEVVPRFIANEVEGVVYLKELEPINTPIAFFTIK
DPDEKYKVNCYLDGDGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFHV
NKIIKVQVLDDNDNSPVFSQQLIELSIEENNVPNAFLTKLHATDADSGERGEVSYFLGPD
APSYFSLDKTTGVLTVSTQLDREEKEKYRYTVKAIDSGYPPRESIATVAITVLDKNDNSP
RFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVVNGSDIFVIDTGKGVLRAK
VSLDREQQSSYVLWIEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPS
TLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMRNDYGL
YRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDINIEEKQPQISIEPA
HKKVESASCMPTLVALSIISLGSITLVTGMGIYICLRKGKKRHRTDENLEVQIPLNGRIS
LHMLEKKPMEISNI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccgccgggcagcagcggcgcccgccgcggccgccagcacttgatcctcttc
ctgctcttcgtgggacctttcaactgcttcgccagctacagccgtgccaccgagctcttc
tacagcctcaacgaggggctgccagccggggtgctcatcggcagcctggcccgtgatctg
cggctgcccacggctgacgggcagcaccccttggccctgcagcctccgctgtccttcacg
ctggcctcccggggcctgggggaccagtacgtgcggctggacaaccgctctggcgagctg
cacacctcagccttggagattgaccgggaagctctgtgtgtggagagcagtgaggccacc
atcatcgggggagcagccgctgcctcttcctcctcgtcaccctcgcctgagtcatgcctg
ctgctgctggacgtgctggtactgccacaggagtacttccgcctggtgaaggtgaagatc
gcgatccgggatgtcaatgacaacgcgccacgcttccctgtgccccacatccacctctcc
gtgcccgagaatgcaccagtgaacacccgcctggccattgagcatcctgccttcgacccc
gacatgggcaccaatggggtccagacctaccgcctgcgggataactatggtgtcttcacc
ctagatgtggaggagaatgagagtggggagaggaccccctacttgattgtcatgggggct
ctggacagggaggtcagggaggagtacgtcacggttattgttgctgaggatggggggact
cctccacttgtgggcagtgccacgctcaccattggcatcagcgacatcaatgacaactgc
ccccagttcaacgactctcagctcaatgttactgtttatgggaattccaccctcgggaca
catgtggccactgtgcacgcaacagacatggaccttggatccaatgcccagatcacctat
tcctacagccagaaggtctcccaggcatccagagacttgttccgtctggatgaaagcaca
ggagttatcacactctccagtaaggttgatggggactcaccaaggctccacaggctgatc
atcctgggcaacggccctggttgcatccctgcggtgatcacagtgctagtgaccatcatc
aaagtcatgatgcggccacctgaagttgtcccccgtttcatagctaatgaagtggaggga
gtggtgtacttaaaggaactggagcctatcaacacaccaatagcattttttaccatcaaa
gaccctgatgaaaaatataaagtgaattgctatttggatggtgatgggcctttcagactg
tcaccgtacaagccatacaacaatgagtacttactggagaccacaaagcctttggactat
gagactcagcagctctatgaaatctcagtagttgcgtggaactcggaagggtttcatgtc
aacaaaataatcaaagtacaggttctggacgacaatgacaactcaccagttttctctcaa
cagctgatagaattatccattgaggagaacaatgttcccaatgctttcttgaccaaattg
catgctacagatgctgacagtggagaaagaggagaagtgtcctattttttagggcctgat
gccccttcctatttttctttagataaaaccacaggagttcttacagtttctacacaattg
gacagagaagaaaaagagaaatacagatatactgtcaaagcaattgattctggatatcct
ccaagagaatcaatagcaactgttgccattactgtattggataaaaatgacaatagtcca
agatttatcaacaaggatttcagcttttttgtacctgaaaacttcccgggatttggtgaa
attggagttatcagtgtcacagatgctgacgcagggcagaatggatgggttgccctttca
gttgtgaatggaagtgatatttttgtcatagatactggcaaaggggttttgagagcaaaa
gtttccctcgacagggagcagcaaagctcctatgttctgtggattgaggcagttgatggt
ggtgatcctgccctgtcctctactgcaaaaataacaatccttcttctggacataaatgac
aacccccctctggtcttgtttcctcaatctaatatgtcgtatttgttggtacttccttct
actcttcctggttctcccatcactgaggtctatgctgttgacaaggacactggcatgaat
gcagtgatagcctacagcatcatagggagaagaggccctcgcccagagtcatttcgaatt
gaccccaaaactggcaatatcaccttggaagagtcactgatgcgaaacgactatggcctc
tatcggttgcttgtcaaagttagtgatcacggttacccagaacccctccattccaccgtc
atggtgaacctctttgtcaacgacactgttagcaatgagagctacatcgaaagtttgtta
agaaaggagccagatatcaatatagaagaaaaacaaccgcaaatatccatagagcccgcg
cataaaaaagtggagtcagcatcctgcatgcctaccttagtagctctgtcaatcataagc
ttgggttcaatcaccttagtaactgggatgggcatttacatctgcctcaggaaggggaaa
aagcgtcacagaacagacgaaaacttggaagtacaaatcccattaaatggaagaattagc
ttgcacatgctggaaaagaaaccaatggagatttctaatatttga
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