Tinamus guttatus (white-throated tinamou): 104568973
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Entry
104568973 CDS
T08560
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04140
Autophagy - animal
tgt04148
Efferocytosis
tgt05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104568973 (VPS18)
04148 Efferocytosis
104568973 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104568973 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgt04131
]
104568973 (VPS18)
Membrane trafficking [BR:
tgt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104568973 (VPS18)
Hops complex
104568973 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_5
zf-RING_16
zf-RING_2
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
Nup54_57_C
zf-rbx1
STX17_N
TMEM249
zf-C3HC4
LETM1_C
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104568973
NCBI-ProteinID:
XP_010214217
UniProt:
A0A099ZAS6
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVPPSRAAVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGTETNTGPILVGTAQGQIYEAEISVSEGG
LFSTNPDQYFRLVYVLEEESGPVPVCCLEIERGIEGKFFIIATTQKRLFQFVGKVPEGTE
HQGFSSIFAMHADYLPSFREFPATFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPESILSEERVWDYPSDIDITVNKPISIVLTQFHFLLLLPDGVKAVCTLNGQIVFQDLFL
EKFGTLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDSSKRNLYLDTREKFRTFLGSPKNKDCLFNNR
TSIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALSVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACEFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATGQPSKSHHRPKDVDTASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactccttgtaccgctcggcctcggtgccgccc
agccgcgccgccgtgggcatcccgcactccggttatgtgaatgcacgactggaaaaggaa
acaccaatatttaataagcaaaggattgatttcactcctccagagaaaattaacagcctt
gtggtctcctctaaccagctttgtatgagcctcggcaaagacactcttctcaggattgat
cttgggaaaccagatgaacctaatcaagtagagttgggacgcaaagatgaagctaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctttgaacaccagtgaa
tgtctttacctaaacagaagtgttcagaaagtgcgagcactgtctcgctggaaaggccac
ttgattgaaagcgtgggctggaacaaatttctaggcacagagaccaatactgggcctatt
ctggtggggacagcccaggggcagatctatgaggctgagatctctgtcagcgaaggaggc
ctcttcagcactaaccctgaccagtacttcagactggtttacgttctggaggaggaatcg
ggacctgtcccagtctgctgcttggagattgaacgagggatagaaggaaaattttttatt
atagctaccactcaaaaaagactcttccagtttgttggcaaggtacctgaagggacagag
catcaaggcttcagctccatatttgctatgcatgctgactatttgcccagcttccgggag
tttccagccacctttggcttcagtgaaatagccttctacaccccaaaactgcgctctaac
ccccgatcctttgcctggatgatgggaaatggtgtcttgtatggcacactggactatagc
cgacccgagtcaattctgagtgaggaacgggtctgggattatccttctgatatagacata
actgtgaacaagccaatctctatcgtacttacccagttccactttctgttgctgcttcct
gatggggtgaaggctgtatgcactctgaatgggcaaattgtttttcaagatctcttcctg
gagaagtttggcacactaacacgcatgatcaaagatcccactgtccagcagatatggatc
cacacggagaaagtagtgttccgctaccacgtccagcgggaatctagagatgtgtggaaa
atgtacatgaacatgaacaagtttgatttagccaaagagtattgtaaagatcgtccagag
tgcctagatattgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtatcta
gacagtgctaaatgttatgcattgacacagaactactttgaggaaattgcccttaagttc
attgaagccaaacaagaggaggccttgatggagtttctaattaagaagctaagcaaccta
aagccttctgagaagacacagaccactctgctgaccacatggttaacagagctttacctg
aactggctaggtatattggaaggagattcctcaaagcggaatctctacttggatacacgg
gagaagtttcgcaccttcctggggagccccaagaacaaagactgtctatttaataaccgc
acatctatttatgagctgctggcaagtcatggggacacagagcacatggtgtactttgca
gttatcatgcaggactatgagcgagtagtagctcaccactgccagcacgatgaatatgat
gaagccctaagtgtgctgtctagacacagagatgagaagctgttctacaagttctctcca
gtcctcatacagcacattcctaagaaggtagttgatgcttggatttctatgggctcaaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcactcag
cagatcaatgaagccattagatatatggagttctgtgtctatcagctggaggaaactcag
caagccattcacaactatctgctgtctctctacgctttgtgtcggccagactcgttgctg
tcatatctggagcaagcgggaaccaacccaaaccgaatccactatgacctgaagtatgca
ctgcgcttgtgtgcagaacatgggcaccaccgtgcctgtgtccatatttacaaagtgatg
gagttatatgaggaggctgtggatcttgctttgcaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgacgaggaacttcggaagaaactctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagatgtcctgcccttctttccagactttgtgactattgaccat
ttcaaggaggcaatctgcaactctctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacgcagagtgccaagagaatccgagaagacatccaggaaatg
agaaacaagtatggctctgtggaacctcaggaaaaatgtgctgcctgtgagtttccactt
ctaaaccgccctttttaccttttcctttgtggccacatgtttcactacgactgtctcctc
caagcagtttttccaaaccttcccgcctataagcaggcaaaactggaagatcttcaaaag
aagctggcagccactggccagccctctaagagccatcatcgtcctaaggatgtagatact
gctagcctagggaaggggcaacagagccgggaacagatcaaagctgatattgatgatatt
gtggcagctgaatgtgtgtactgtggggagctgatgatccggtccatagacaaacctttt
attgatcctcagaagtatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
