KEGG   Tinamus guttatus (white-throated tinamou): 104569135
Entry
104569135         CDS       T08560                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
tgt  Tinamus guttatus (white-throated tinamou)
Pathway
tgt03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tgt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    104569135 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgt03400]
    104569135 (WDR48)
DNA repair and recombination proteins [BR:tgt03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     104569135 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 104569135
NCBI-ProteinID: XP_010214392
LinkDB
Position
Unknown
AA seq 687 aa
MENSTIKFGRRAEALQELGVAATDYLSKKGFKGIVKKILLETVSYVIRDEVEKYNRNGVN
ALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISAS
SDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA
SNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVK
ALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDR
KIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPALWVATTKSSVNKWTLKGIHNFRA
SGDYDNDCTNPIPPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACK
VEDLGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPD
GSDPKLNLGGLLLQALLEYWPRTHINPMDEEENEINHVNGEQENRVQKGNGYFQVPPHTP
VIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSS
SGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVL
AEEKIELLCQDQVLDPNMDLRTVKHFI
NT seq 2062 nt   +upstreamnt  +downstreamnt
atggaaaacagcacaataaaatttggaagaagagcagaggctttgcaagagttaggagtg
gctgctacagactatttaagcaagaagggatttaaaggcattgtgaaaaagatattgctg
gaaactgtctcctatgtgattagagatgaggtggagaagtataaccgaaatggggtaaat
gcacttcagctggatccagcactaaataggctcttcacagcaggccgagactctattata
aggatatggagtgtcaatcagcacaagcaagacccttatatagcatctatggaacatcac
acagattgggtaaatgatattgtactctgctgcaatggtaaaacattgatatctgcatct
tcagatactactgttaaagtctggaacgcacataagggattttgcatgtcaacactaagg
acacataaggattatgtgaaagctttagcgtatgcaaaagataaagaactggtagcatct
gctgggctggacagacagattttcctctgggatgtaaatactctaacagcactgactgcc
tcaaataacaccgtcacaacttcttccctcagtgggaacaaagactctatctacagcctt
gcaatgaatcaaatgggaacagtaattgtgtcagggtccactgaaaaggttctaagggtg
tgggatccaagaacttgtgcaaaactaatgaaactcaaaggacacacggacaatgtgaaa
gctttgctgttgaacagggatggcacacagtgtctttcaggcagttctgatgggactatc
cgcctgtggtcccttgggcagcaaagatgcatagccacataccgagtccacgatgaaggg
gtctgggctctgcaggtcaacgaagccttcactcatgtttattctggaggaagagacagg
aagatttactgtacagatttgcgaaatccagatatccgtgtgctgatctgtgaagaaaag
gccccagttcttaagatggaactggatagatctgctgaccctcctccagcactttgggtt
gcaacaacgaaatcctctgtgaataaatggactttgaagggaattcataattttagagca
tctggggactatgataatgattgtaccaatcctataccacccctatgtacccagcctgac
caagttattaaagggggtgctagtattattcagtgccacattcttaatgacaagagacac
atattaaccaaagacacaaataataatgtggcatactgggatgtcttgaaggcgtgtaaa
gttgaagaccttgggaaagtagatttcgaagaagaaattaagaagagatttaaaatggtg
tatgtgccaaactggttctcagtagacttaaaaactgggatgctgacaattactttggat
gaaagtgactgctttgcagcttgggtttcagcaaaggatgctggatttagcagtccagat
ggttctgatccaaaattaaaccttggagggcttctgctacaggcgcttctagagtattgg
cctagaacacatatcaatccaatggatgaagaagaaaacgaaataaatcatgtgaatggt
gagcaggagaacagagtacagaagggaaatggatactttcaagtgccaccacatacacca
gttatttttggtgaggctggaggacgcactttgttcaggttattatgtcgggattcaggc
ggtgaaactgaatctatgcttcttaatgaaaccgtgccacaatgggtgattgacatcact
gtggataaaaatatgcccaagttcaataagattcccttctacctccaacctcattcatct
tcaggggcaaaaactctaaaaaaagatcgactgtcagcaagtgatatgctccaggtgaga
aaggtgatggaacacgtttatgagaaaatcataaacttggataacgagtctcagacaaca
agctcttccaataatgaaaaagcaggagaacaagaaaaagaggaggacattgctgtgtta
gcagaagagaagattgagcttctgtgccaggatcaggttttggacccgaatatggacctt
cggactgtaaagcacttcatct

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