Tinamus guttatus (white-throated tinamou): 104569462
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Entry
104569462 CDS
T08560
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104569462 (PTBP1)
03041 Spliceosome [BR:
tgt03041
]
104569462 (PTBP1)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104569462 (PTBP1)
Spliceosome [BR:
tgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104569462 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104569462
NCBI-ProteinID:
XP_010214729
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSGNASSAANGNDSKKFKGDSRSAGVPSRVIHVRKLPSDVTEAEVISLGLPFGKVTNLLM
LKGKNQAFIEMNTEEAANTMVNYYTTVTPVLRSQPIYIQFSNHKELKTDNSPNQARAQAA
LQAVNTVQTGNLALPASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTV
LKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNND
KSRDYTRPDLPSGDNQPSLDQTMAAAFGAPGIISASPYAGAGFPPTFAIPQAAGLSVPNV
HGALAPLAIPAAAAAAAGRIAIPGLTGAGNSVLLVSNLNPERVTPQCLFILFGVYGDVQR
VKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQTVQLPREGQEDQGL
TKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSITEEDLKMLFSSNGGMVKGFKF
FQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaacgcttcctctgcagctaatggaaacgacagcaaaaaattcaaaggtgat
agtagaagtgctggggtcccatctcgagtaatccacgtccgtaaactccccagtgacgtc
acggaggcagaggtcatttctttgggcttaccttttggcaaggtcaccaatcttctaatg
ttgaaaggaaaaaatcaggctttcatcgaaatgaatacggaggaggcagccaacaccatg
gtaaactattataccacagtcactccagttcttcgaagccagcccatctacattcagttc
tccaaccacaaggagctcaaaacggacaactctccaaaccaagcacgtgcccaagcagct
ctgcaagcagtgaacactgttcagaccggaaacctcgcgctgccggcctccgcggcagct
gtggatgcaggaatggcgatggctggccagagccctgtcctgaggatcattgtggagaat
ctcttctaccctgtcactctagatgttctgcatcagattttttccaagtttggtacagtc
ttgaaaataattacattcacaaagaacaaccaatttcaagccctgctacaatatgctgat
ccagtgagtgctcagcatgccaaactgtctttagatggacagaatatctacaatgcctgc
tgtacactgcgcatagatttctccaagctcacaagtctcaatgtaaaatataacaatgat
aagagcagagactatacacggccagacctaccttctggggacaaccagccctctcttgat
cagaccatggcagctgcttttggtgcccctggaataatttctgcctctccatatgcagga
gctggctttcctcctacctttgcaattcctcaggctgcaggcttgtcagttccaaatgtt
catggagcactagctcctttggctatcccagcagctgcagcggctgcagcaggacggatt
gccattcccggcctcactggggcagggaactccgttctgctggttagcaatctgaatcct
gagagagttacaccccaatgcctctttattcttttcggagtctatggtgatgtgcagagg
gtgaagattttatttaataagaaagagaatgccctagttcagatggctgatggaaaccag
gctcagcttgccatgagtcatttaaatggtcagaagcttcacgggaagcctatccgtata
actctgtccaagcaccagacagtacagcttccccgtgaggggcaggaagaccagggtctg
accaaggattatggaaattctcctctccatcgtttcaagaaaccaggctccaaaaatttc
caaaacatcttccccccttctgccactcttcatctgtccaatattccaccttcaataact
gaagaagacctcaagatgctattttcaagcaatggtgggatggtcaaaggattcaaattc
ttccagaaggaccgtaaaatggctctgatccagatgggctctgtggaagaagcaattcag
tcgctcattgaccttcataatcacgaccttggggagaatcatcacctgcgtgtgtccttc
tcaaagtccaccatttaa
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