Tinamus guttatus (white-throated tinamou): 104570067
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Entry
104570067 CDS
T08560
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104570067 (SHOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
104570067
NCBI-ProteinID:
XP_010215370
UniProt:
A0A099ZB33
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKEGKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLHSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISSLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctaggaaaagaaaaagactgtaaggagaaggatccaaaagtcccatca
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagagggcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtggccttttcagtggacaatacgataaaacgacctaacccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattccatgcgcttggacttgtccaagaggtcgatacacatgcttccgtcagccgtcaag
gagttaacgcaattaacggaactttatttatacagtaacaaactgcagtctctcccggca
gaggtgggctgccttgtgaacctggtgacactggccctgagcgaaaactcgctcaccagt
ttgcctgactctctcgataacttgaagaaactgcgcatgcttgacctccggcacaacaaa
ctgcgcgaaatcccctccgtcgtctaccggctacactcgctcgccacgctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgggagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaggagattggaagttgc
acgcagatcaccaatctggacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaacctgtccagtctaagccgtcttggcctaaggtacaacaggctgtcggcaattccg
aagtccttagcgaagtgcagcgaacttgacgagctgaacttggagaacaacaacatttct
agtctacccgagggtcttttatccagtcttgtcaaattgactagtttaacactggccagg
aactgcttccagtcctaccctgtgggcggcccgtcccagttctccacaatctactccctc
aacatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagtt
ttaagtaagctgaacatgaaggacaatcagctgacctcgctccccttggacttcgggact
tggacaagcatggtggaactgaacctagctactaatcagctcacaaaaatccccgaggac
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctacggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgaccaat
aatcagttgaccacccttcccagaggtattggtcaccttaccaatctaacgcaccttggg
cttggagagaatctcctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcgggaggaccctcctttatcatccagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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