Tinamus guttatus (white-throated tinamou): 104570356
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Entry
104570356 CDS
T08560
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgt04812
]
104570356 (KATNB1)
Cytoskeleton proteins [BR:
tgt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104570356 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_1st
eIF2A
RMC1_N
Beta-prop_WDR19_1st
WDR54
VPS8_N
PROPPIN
Beta-prop_VPS8
Beta-prop_LRRK2
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
104570356
NCBI-ProteinID:
XP_010215660
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAVSVATKTAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPIESLQINTNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMSEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLNRVTKSGSILHGLIRDDKPLVQPAPAGSSLRRIYDRPSTSCSKPQSRVKHNSESERRS
PSSEDDRDEKESKAEIQNPEDYKEIFQPKNSISRTPPRNNEPFPAPPEDEPAAVKEAAKP
SQTADVQTPLPKQEHSDPIQRPPIASSTPVTRTEPSVIPAARNEPIGLKASDFLPAVKNQ
SQAELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccgtggccaccaagacggcgtggaagctgcaagagatcacagctcacagc
agcaatgtgtcctcgctagtcctggggaagagttcaggccggctactggcaaccggagga
gatgactgtcgggtcaacatatggtcggttaacaagcccaactgcatcatgagcttgaca
ggccatacaacccccatcgagagcctgcagatcaacacaaatgaggagctcatagtcgca
gggtcccagtcgggctccattcgagtttgggatctggaagctgccaaaattcttcggaca
ttgctgggtcacaaggccaatatctgcagcctcgatttccatccttttggaagctttgtg
gcatctggttctttggacacaaacattaagctctgggatgtaagaagaaaaggctgcgtc
ttcagatacaagggtcacacacaagctgttaggtgtctccggtttagccctgatgggaaa
tggttagcctctgctgctgatgatcacactgtaaagctgtgggatctggctgctgggaag
ataatgtctgaatttacaggacatactggcccagtaaatgtcgttgaatttcatcccaac
gaataccttttggcttctggcagctctgacaggactgtccgattctgggacttggagaag
tttcaagttgtgagctgtattgaagaggaggccacaccagtcaggtgtgtgctcttcaac
ccagatggctgctgcttgtatagtggcttccaggattcgctgcgtgtgtacggctgggag
ccagaacgctgttttgatgtggtcttggtgaactggggaaaagtagctgacttatctatc
tgcaacaaccagctgataggagtttcctttgcacaaagcacagtctcctcttttgttgtg
gatctcaacagagtcacaaaatcaggttccattcttcacgggttgatcagggacgacaag
cctcttgttcagcctgcccctgcagggtcctcccttcgccgcatctatgacagaccatca
actagctgcagcaagccacagagcagggtgaagcacaactcagagagcgagagacgcagt
cccagcagtgaagatgaccgggatgagaaggaatcgaaggctgaaatccagaacccagag
gactacaaagagatcttccagcccaagaactccatctctcgaactcctccacgaaacaat
gagcccttcccagcccctcctgaggacgagcctgcagctgtaaaggaagcagcaaagccc
agccaaactgcggatgtccagaccccattgccaaagcaggaacactctgacccaattcag
aggccgccaattgcctcctcaacccctgtcacaagaacggagccatcggtgattcctgca
gcaaggaatgagcccattggcctgaaggcctctgactttctaccagctgtgaaaaaccaa
agccaggccgagctggtggatgaggaggccatgtcccagatcaggaagggccacgagacc
atgtgcgtggtgctcaccagccgccacaagaacctggacactgtgcgggctgtgtggagc
actggtgacattaagacctctgtagactctgctgtggccatcaacgacctctctgttgtt
gtcgacctcttgaatatcgtcaaccagaaagcgtctctctggaagctggatctgtgcact
atagtcctgccacagatagaaaaactactccaaagtaaatatgaaagttacgtacagact
ggctgcacgtccttaaagctcattctgcagcgattcctgcccctgatcacagacatcctt
gctgcaccgccctccgtcggggtggacatcaccagagaggaaaggctccataaatgcaag
ctgtgctacaagcagctcaaaaacatcagcaacattgtgaagaacaagtccgggctcagc
ggccgccacggtagtgccttccgggagctgcatctcctcatggctgtcttggagtga
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