Tinamus guttatus (white-throated tinamou): 104570543
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Entry
104570543 CDS
T08560
Symbol
PATL1
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104570543 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104570543 (PATL1)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104570543 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
104570543 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oxysterol_BP
PAT1
LRIM1_dimer
Motif
Other DBs
NCBI-GeneID:
104570543
NCBI-ProteinID:
XP_010215866
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
NSSLLGHSFPHSVSPVLSHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQG
RVGQMMSPASGFRAFFGAPPAPPPSQPQHPPGPGCHLQSLSPRGLNGSVGARGGPRSSHQ
EQMRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDYYYQNYFQKLEKLSAAEEVQGDG
PKKERTKLITPQVAKLEHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRGEDEETKEK
QVRDKRRQTLVTIEKTYSLLLDVEDYERRYLLSLEGERPALVGERKQKICDMYDNLRGKA
PGQERPSDDHFVQIMCIRKGKRLVARILPFLSPEQAADVLMATARNLPFLIKKDAQDEVL
PCLLSPFSHVLYHLPLGTLTNPCCPVKGDVSDEDDDNEFFDAPEIITVPESMGHKXALRL
GAALPARRSPLPPPLQYKHQLEDTKKEKRTRIPYKPNYSLNLWSIMKNCIGKELSKIPMP
VNFNEPLSMLQRLTEDLEYYELLDRAARCESSLEQLCYVAAFTVSSYSTTVFRTSKPFNP
LLGETFELDRLEESGYRSLCEQVCPHPPAAAHHLDSKNGWTLRQEIKITSKFRGKYLSIM
PLGTIHCVFHSSGNHYTWKKVTTTVHNIIVGKLWIDQSGEIEIVNHKTGDKCVLKFVPYS
YFSRDVARKVTGEVTDPAGKVHFFLLGTWDEKMDCYKVTPGTGDNSAEGRQRAHEAEDSR
VLLWKRNPLP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
aattcctccctcctgggccactcgttcccgcacagcgtctctcccgtcctcagccacctg
cagagagcgcagctgctcggaggagcccaggctggccgaatgtctcccagccagtttgcc
cgggtctccggcctcgttgggagcccccttccctctgtgaatcccaagctgctgcagggc
agggttgggcagatgatgtctccggccagcggctttcgtgccttcttcggagctccccct
gctccgcctccatcccagccgcagcacccgccgggccccggctgccacctgcagagcttg
agcccgcgcggcctcaacggctcggtgggggcccgagggggcccccggagcagccaccag
gagcagatgcgcaaggacccctacgccaacctcatgctgcagcgggagaaggactgggtc
tccaagatccagatgatgcagctgcagagcactgatccctacctggatgactattactac
cagaattacttccagaagctggagaagttgtcagcggctgaggaagtccagggtgacggt
cccaaaaaggaacgcactaaactcatcacgcctcaggtggccaagctggagcacacctac
aagccggtgcagtttgagggctcactggggaaactcacggtctccagcgtgaacaacccc
cgaaagatgatcgacgctgtcgtcacctcccgtggcgaggacgaggagaccaaggagaag
caggttcgagacaagcggcgtcagaccctcgtcacgatcgagaagacctacagcctcctc
ctggatgtggaggactacgagcggcgctacctgctgagcctggagggcgagcggccggcc
ctcgtgggcgagaggaagcagaagatttgcgacatgtacgacaacctgcgggggaaggcg
cctgggcaggagaggccgagcgacgaccacttcgtacagatcatgtgcattcgcaagggg
aagcgccttgtggcccggatcctccccttcttgtcaccagagcaagcagctgatgtcctc
atggctacggccaggaacctgcccttcctcatcaagaaggatgctcaggacgaggtgctg
ccctgcctgctgagccccttctcgcacgtcctctatcacctccccttggggacgctaacg
aatccgtgctgccctgtgaaaggagacgtgagcgacgaggacgacgacaacgagttcttc
gacgcgccggagatcatcacggtgcccgagagcatgggtcacaagtgagcgctgcgcctc
ggggctgccctcccggcccggcgctcccctctccccccgccgctgcagtacaagcaccag
ctggaggacaccaagaaggagaagaggactcgcatcccctacaagcccaactacagcctc
aacctgtggagcatcatgaagaactgcatcgggaaggagctctccaagatccccatgccg
gtgaacttcaacgagcccctgtccatgctgcagcgcctcaccgaggacctggagtactac
gagctgctcgaccgggcggcgcgctgcgagagctccctggagcagctctgttacgtggcc
gccttcaccgtctcctcctactccaccaccgtcttccgcaccagcaagcccttcaacccg
ctcctgggggagaccttcgagctggaccgcctggaggagagcggctatcgctccctctgc
gagcaggtctgtccccacccgcctgcggccgcccaccacttggactccaagaacggctgg
acgcttcgccaggagattaaaatcaccagcaaatttcggggcaaatatctctccatcatg
cccctgggtaccatccactgcgtcttccactcctccggcaatcactacacgtggaaaaaa
gtcaccaccaccgtgcacaacatcatcgtgggcaagctctggatagaccagtccggtgaa
atcgagatcgtcaatcacaagacgggcgacaagtgcgtcctcaagttcgttccttacagc
tacttctctcgggacgtggcgaggaaggtcaccggcgaggtgacagaccccgccgggaag
gtacacttcttcctgctgggcacctgggatgagaagatggactgctacaaggtgacgccg
ggcacgggggacaacagcgccgaggggcggcagagggcccacgaggccgaggacagccgg
gtgctgctgtggaagaggaacccgctgccgtga
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integrated database retrieval system
