Tinamus guttatus (white-throated tinamou): 104570552
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Entry
104570552 CDS
T08560
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03015
mRNA surveillance pathway
tgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104570552 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
104570552 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104570552 (PABPC1L)
03041 Spliceosome [BR:
tgt03041
]
104570552 (PABPC1L)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104570552 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
104570552 (PABPC1L)
Spliceosome [BR:
tgt03041
]
Complex C
Other components
Complex C specific factors
104570552 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_Nup35
RRM_occluded
RRM_7
RBD_DEAH11
RRM_5
RBD_RDR6
RRM_RdRP1_2
RRM_3
ATP-grasp_2
DUF6262
Motif
Other DBs
NCBI-GeneID:
104570552
NCBI-ProteinID:
XP_010215877
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETREAATRAIDTMNGMLLNDRKVFVGHFKSRKERE
AEIGAKAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDNAGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRLVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKN
LDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPAGYFLPPIPQRRILQLP
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggtcccggatacccgctggcctctctctacgtgggagacctgcacccg
gacgtgaccgaggccatgctctacgagaagttctcgcccgccgggcccatcatgtccatc
cgggtgtgtcgggacgttgcgacgcgccgctcgctgggctatgcctacataaacttccag
cagcccgcggacgccgagcgagccctggacaccatgaacttcgaggtgatcaaaggccgg
cccatccgaatcatgtggtcccagcgagaccccgggctcaggaagtcgggggttggaaac
gtcttcatcaagaacctggatgactccattgataacaaagccctgtacgacacgttctct
gccttcggcaatatcctgtcttgcaaggtggtgtgtgatgaaaacgggtcccgcggttat
ggctttgttcactttgagacgcgtgaggcagcgactcgagccatcgataccatgaacggg
atgctgctcaatgaccgcaaggtatttgttggccactttaaatcccgcaaggagcgtgag
gcagagattggggctaaggcaatggaattcaccaatgtctacatcaaaaacttcggggat
gacatggatgatgacagactgcgggaaatattctccaagtttgggaagacgctcagcgtc
aaagtcatgatggacaacgctggccgctccaagggctttggatttgtcaactttgagaag
cacgaggaagcccagaaggccgtggccgacatgaatggcaaggagatcaacgggcgcctg
gtgtacgtgggccgggcccagaagcggctggagcgccagagcgagctgaagcgcaagttt
gagcagatgaagcaggagcgagtgagcaggtaccagggggtcaacttgtatgtgaagaac
ctggatgatggcatagatgatgagaggctgaggaaggagttctccccctatggcaccatc
actagtgcaaaggtgatgacagagggtggacacagcaaagggtttgggtttgtatgtttt
tcctccccagaagaggctaccaaggccgtgacagagatgaatgggcggatcgtcagcacc
aagcctctctacgttgcactggcccaaagaaaagaagagcggaaagcaattcttaccaac
cagtacatgcagagactagccaccatgagggcccttcccggccctctgcttggctctttc
caacccccagcaggctacttcctaccccccatccctcagcggcgtatcctgcagctaccc
cgctcctga
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integrated database retrieval system
