Tinamus guttatus (white-throated tinamou): 104571791
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Entry
104571791 CDS
T08560
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104571791 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgt03000
]
104571791 (ARID1A)
03021 Transcription machinery [BR:
tgt03021
]
104571791 (ARID1A)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104571791 (ARID1A)
Transcription factors [BR:
tgt03000
]
Eukaryotic type
Helix-turn-helix
ARID
104571791 (ARID1A)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104571791 (ARID1A)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104571791 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104571791
NCBI-ProteinID:
XP_010217220
LinkDB
All DBs
Position
Unknown
AA seq
1696 aa
AA seq
DB search
MQLDVHNVSPLALQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQ
TPQRYPMGMQSRTQSAMGSISYAQQMPPYGQQGPGTYGQQSQTPYYNQQSPHPQQQQPPY
PQQPPSQTPHAQPSYQQQQPPSQPPQLQGSQPAYSQQQSQPPHQQSPTPYPQAQSSAQQH
QQSQPPYPQQQSQSPYQQQQPTQQAASSALSQSSSYPAAQAQPQAAYSQQRFPPPQELSQ
DSFGSQASSAPSLASSKGQEEMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGI
SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPP
RPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAAMG
PYQQNSMGSYGPQSGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSINPMGAGSQMHGQSG
VPPYSGLPPGRMSHAAMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAAMHVA
ANSIQTRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMASS
PEMMGLADVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWV
DRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGT
SSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGP
QTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSM
TPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAG
PGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGSLATGTPQPNIMPSTPESGMYSPSRYP
QQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQVSSPAPLPRPLENRTSPSKSPF
LHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGT
PEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIE
IFGILKEYEVGDPGQRTLLDPGRFCRASSPLHEEGDEDDEPRRLNCEVEEEAEEEEEAVF
ASKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGD
TTEHIQTHFESKTELLFTHKRASCNSVLRKRSAAESNTSTREGEPAASDGSSEKRITATM
DDMLSARPGSLADDEEETRASESAKESGKFPFGISPAQSHRNIKILEDEPHSKDETPLCT
LLDWQDSLAKRCVCVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPL
TYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLL
HWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYS
TMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQ
QSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNS
LVSQVICDVLFLIGQS
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggatgtacataacgtgtccccgcttgctttgcagccttccagcccaatggat
cagatggggaagatgaggcctcaaccgtatggaggaaacaacccatacacacagcagcag
gggcctcaggctgggccacagcaaggacatggctatccaggacagccctatgggccccag
actccccagagatatcccatgggaatgcaaagcaggacgcagagcgcgatgggcagcatc
tcgtatgcacagcagatgcctccttacggacagcagggccccggcacgtacgggcagcaa
agccaaactccgtattacaaccagcagagccctcacccgcagcagcagcagccgccgtac
ccgcagcagcccccgtcgcagaccccgcacgctcagccttcctatcagcagcagcagcct
ccgtcgcagcctccccagctgcagggctcccagcctgcctactcgcagcagcagtcgcag
ccgccccatcagcagtccccgactccgtatcctcaagcgcagtcctcagcccagcagcac
caacagagccagcccccctacccccagcagcagtcgcagtcgccctaccagcagcagcag
ccgacgcagcaggcggcttcctcggcgctgtcgcagtcgtcctcgtaccccgcggcgcag
gcgcagccgcaggccgcgtactcgcagcagcgcttcccccctcctcaggagttatctcaa
gactcatttgggtcccaggcatcatctgctccctcactggcttccagtaaagggcaagaa
gaaatgaacttgaatcttcagtccagaccttcgagcctgccggacctgtccggttcgata
gatgatctgcccatgggtacagaaggagccctgagtcctggagtaagcacgtcagggatt
tccagcagtcaaggagagcagagtaacccggctcagtctcctttctctccacatacctct
cctcacctgccaggcatcagaggaccctccccgtcccctgttggatctcctgctagtgtt
gctcagtcccgctctggtccgctctcacctgctgcagtaccaggcaatcagatgccaccc
cgaccgcctagtggccagtcggacagtatcatgcatccttccatgaaccagtcgagcatc
gcgcaagatcgaggttacatgcagaggaaccctcaaatgcctcagtacagctcgccccag
cccggctcagccttatctccccgccagtcctctggaggacagatgcacgcggcgatgggg
ccgtaccagcagaactccatggggagctacggaccccagagcggccagtacggacctcaa
ggaggttatcccaggcagccaaactacaatgcgatgtccaatgccaactaccccagtcca
ggaatgggaggaagcataaaccccatgggagcagggagccagatgcacgggcagagcggc
gtgcccccgtacagcgggctgcccccggggaggatgagccacgcggccatggggaacagg
ccctacggacccaacatggcaaacatgcccccgcaggtgggcacggggatgtgtcccccg
ccgggtggcatgaaccgcaaagcacaagaggcggccgccgccgccgccatgcacgttgct
gccaactccatccagaccaggcctcctggttatcccaacatgaaccagggggggatgatg
gggactggacctccttatggacagggaattaacagtatggctggcatgataaatccccag
ggccctccctatccaatgggcgggaatatggccaacaactctgcagggatggcatcaagt
cctgaaatgatgggtcttgcggatgtcaaattgacacctgctactaaaatgaacaataag
gcagatggaacaccaaaagcagaatccaaatcaaagaagtccagttcttctaccacaacc
aacgagaagatcaccaaactctacgagctgggtggcgagcctgaaaggaagatctgggta
gatcggtatctagcctttactgaagagaaggccatgggcatgaccaaccttccagcggta
ggcaggaaacccttggacctttaccggctctacatctccgtgaaggagattggaggattg
actcaggtcaacaaaaacaagaaatggcgcgagctagccacaaatctcaacgtgggcacg
tccagcagcgcagccagttctttgaagaagcagtacatccagtgtctgtacgccttcgag
tgcaagattgagcgaggtgaagacccccctccagatatctttgcagccgcggattcaaag
aagtcacaaaccaagatacaacctccatctccagcgggctcaggctccatgcagggtcct
cagacgcctcagtccaccagcagctccatggcagagggaggagatctaaagccgccaact
ccagcgtccaccccacacagtcagatgccccctttgcccggcatcagaagcaactcagtg
ggccttcaggatgcctttgcagatggcagcgatcccacgttccagaagcggaactccatg
actcccaatccaggttaccagcccagcatgaatacctccgacatgatgggtcgcatgtct
tacgagccaaataaagatccttacagcagtatgaggaaagccccgggaagcgatcccttc
atgtcctcagggcagggccccaacagtggtatgggtgacccttacaatcgtgctgcaggt
ccagggatgggtaacatggccatgggacagcggcaacactattcctacggcggtccttac
gacagagtgaggacggagcctggcatgggacctgagggcagtttagctactggaactccg
cagcccaacatcatgccttccaccccggagtcggggatgtactcgcccagccgctacccg
cagcagcagcagcaaagacatgattcctatggcaatcaattctccactcaaggcacatcc
tcgggcagccccttccctagccagcaaactaccatgtatcagcagcaacagcaggtatcc
agcccagcgcccctgcccagacctctggagaaccgcacttctcctagcaaatctccattc
ctgcactcggggatgaaaatgcagaaggcaggacccccggtgcctgcctcgcacatcaca
ccagcagctgtacagcctcccatgatccgacgggacatcaccttccctccgggatcggta
gaagcgacgcaacccgtgttgaagcagcggaggcggctgacagcaaaagatattggaact
cctgaagcctggagagtgatgatgtctctgaagtctgggctgttggctgagagtacgtgg
gccttagataccataaacatcctgctctatgatgacaacagcataatgaccttcaacctc
agccagctgccaggcttgctggagctcttggtggagtatttccgacgttgcctgatcgag
atcttcggaatcctgaaggaatacgaggtgggagacccggggcagagaacactactggat
cctggaaggttctgcagggcttcaagtccccttcatgaagaaggggatgaagatgatgaa
ccacggcgcctgaactgcgaggtggaggaggaggctgaggaagaggaggaggctgtattt
gcgagcaaggacaaagcacccctagagagcagcgaggagaagctagttagcaaatttgac
aagctcccagtgaaggtggtgcagaaaaacgacccgtttgtggtagattattcagacaag
ctggggcgagtgcaggagttcgacagcggcctgctgcactggcggatcggcggcggagac
accacggagcacattcagacccactttgagagcaagacggagctgctgttcactcacaaa
cgagcttcctgcaactccgtcttgaggaaacgttccgcagctgagagcaatacgagcact
agggaaggagagcccgccgcgtccgacggctcctcggagaagaggataacggccaccatg
gacgacatgctctccgcacgcccgggctccctggcggatgacgaggaagaaaccagagct
tcggaaagcgccaaggaaagcggcaagttcccattcggcattagtccagctcagagccac
cgaaatataaaaattttggaggacgagcctcacagtaaagacgagacgcccctctgcacg
ctcctggactggcaggactctctggccaagcgctgcgtctgcgtctccaacatcatcagg
agtttatcgttcgtgccgggcaatgactttgaaatgtccaaacaccccgggctgctgctg
attctagggaaactgattctcttgcaccacaagcacccagagcgtaaacaggcacccctg
acgtatgagaaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtgg
tgggactgcttggagatgctgcgtgaaaacaccctggtcacgttggccaacatttctggc
cagctggacctctccccttacccggaaagcatctgtttgcctatcctggatggactcctg
cactgggcagtgtgtccgtcggcagaggcgcaggatccctttccaacgctggggccgaac
gctgtcctctcccctcagagactggttttggaaacgctcagcaaactcagcatccaggac
aacaacgtggatttgattctcgccactccccccttcagtcgcttggagaagctctacagc
accatggtgcgtttcctcagtgacagaaagaacccggtgtgccgagagatggccgtggta
ctgctggccaacttggcgcagggggacagcctggcagcgcgggccattgctgtgcagaag
ggcagcattggcaacctgctgggcttcctggaggacagcctggccgccacgcagttccag
cagagccaggccggcctgatgcacatgcagaacccgcccttcgagtcgacgagcgtggac
atgatgcgccgggccgcccgggcgctgctggccctggccaaggtggacgagaaccactcg
gagttcacgctgtacgagtcgcggctcttggacatctccgtgtcgcctttgatgaactct
ttggtttcacaagttatttgtgacgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
