Tinamus guttatus (white-throated tinamou): 104572054
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Entry
104572054 CDS
T08560
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03030
DNA replication
tgt03410
Base excision repair
tgt03420
Nucleotide excision repair
tgt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104572054 (RFC1)
03410 Base excision repair
104572054 (RFC1)
03420 Nucleotide excision repair
104572054 (RFC1)
03430 Mismatch repair
104572054 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgt03032
]
104572054 (RFC1)
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104572054 (RFC1)
DNA replication proteins [BR:
tgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104572054 (RFC1)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104572054 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
AAA_14
AAA_16
AAA_5
Rad17
AAA_30
RuvB_N
AAA_33
AAA_18
AAA_17
RNA_helicase
nSTAND3
AAA_7
Zeta_toxin
NTPase_1
AAA_19
TCAD2
Motif
Other DBs
NCBI-GeneID:
104572054
NCBI-ProteinID:
XP_010217495
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MAAAPRGGATEQDIRKFFGVVPPGKRQECENVKKNEKIKNGEGTSGGKKRGKEAKVNSSS
EEDSKRKPTNRKKRIIYDSDSEEEVQSVKKSKKSPEKKAATSKLGKVLKQDPVVYVSETD
EDDDFVNKRISLKPKENGTSAVGCPGTTVVKKEDVKLRAKNKPLSPVKLTPTSALDFFGT
SSIQRSERKLVASKRKEPSKSRDCTLDDEAIARQLQLDEDSEPRKDSEEQTVVSTKSSPN
VTERYKRSPKVKAANSTDEAKNYTVNTTSENSKGSRLPLQSSDGGIARELVDKTLPLKPS
SKLVALKQKDESTEKERGAPSVLSKGKNASVKEEKRTPKKQKTSPQKPESISPEDSEKKR
INYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLESIERDEAKSLIERYGGK
VTGNVSKKTNYLVMGRDCGQAKREKASTLGTKVLDEDGLFDLIRTMPGKKSKYELAAEME
ARKAEPKQEKTPQKSEAGRRKFSPFKREADNKKKNSTPDKGGTHKSVKKEATAVRRLEDF
KPQPAEKKEASKPGGTLVSERSEDGAEKLLWVDKYKPTSLKAVIGQQGEQSCANKLLRWL
RNWHKNTAEDRRAKTSKFGGKDDGTSFKAALLSGPPGVGKTTTAALVCEELGYSYVELNA
SDTRSKNSLKEVVAESLDNTSIRDFCSGSSSSVSGKHVLIMDEVDGMAGNEDRGGIQELI
GLIRHTKIPIICMCNDRNHPKIRSLSHYCLDLRFQRPRLEQIKGAMMSIAFKEGLKIPPP
AMHEIILSANQDIRQILHNLNMWCAKDKSLTYDEAKTDASKAKKDIKLGPFDVVRKVFAA
GEEASHMSLIDKSDLFFHDYSLAPLFVQENYIHVKPAAAGGNLKKHLVLLSRAADSICDG
DLVDRQIRSKQNWNLLPTQAIYSSVLPGELMRGYMSQFPVFPSWLGKFSSTGKHDRIVQE
LTMHMSLRTQTCKRTLNMEYLPYLRDALVKPLQDLGADGVQDTVAFMDSYCLMKEDVESI
MEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYALPSAKSSKRQVGSVAASELSED
LNVEETPSDEEEQDTVENDAMIKQKKVKSSRLPKPEKNEETTKKEGKRKEKTRR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcccctcgaggtggtgctactgaacaggatatccggaaattctttggggtt
gtacctcctggaaaaagacaagaatgtgagaatgtgaaaaagaatgaaaaaataaaaaat
ggggaagggacctcaggtgggaagaaaagaggaaaggaggctaaggtgaattcatccagt
gaagaagattccaaacgaaagccaacgaacaggaaaaaacgaataatatacgattcagat
tcagaagaggaggtgcagtcagtgaaaaagtccaagaagtcacctgagaaaaaagcagct
acttcaaaacttggtaaagttctaaagcaggatcctgttgtttatgtttcagagacagat
gaagatgatgactttgttaacaagagaatttctctgaaacctaaggagaatgggacatca
gcagtcggttgcccaggaacaactgtagtgaaaaaggaagatgtaaaactacgagctaaa
aacaaacccctctcgccagtgaagctgacccccacctcagcactcgatttctttgggaca
agtagcatccagcgatcggagaggaaactggtagcaagtaagaggaaagaaccctcaaaa
agcagagactgcacattggacgatgaggccattgccaggcaactgcagcttgatgaggat
tcagagcctcggaaagattcagaagagcaaacagttgtgagcaccaagagcagtcctaat
gtgacagaaagatacaaacgttcaccaaaagtgaaagcagccaactcaacagatgaagca
aagaactatactgtaaatactacatctgaaaactcaaaagggtctcgtttgcccctccag
tcatctgatggtggaatagcaagagagctggtagataagaccttgcctttgaaaccgagc
tctaagcttgtggccctgaaacaaaaagatgagagcaccgagaaggaaagaggtgctcca
agtgtgttatcgaaaggaaaaaatgcttcggtgaaagaagagaagagaacaccaaagaag
cagaaaacttctccccaaaagcctgagtctataagtcctgaggactctgaaaagaaacga
ataaattatcaggcctacaggagcttcctaaatcgcgagggtccgaaagctctgggctca
aaagagatacctcagggagctgagaactgcctggaaggcctgacgttcgtcattaccggg
gttctggagtccattgaaagagacgaggccaagtctctgattgagcgttacggagggaag
gtgactggcaacgtcagcaagaagaccaactacctggtaatggggcgagactgtggccag
gctaaacgtgaaaaggcatcaaccttagggacaaaagtgctggatgaggatggcctcttt
gatcttattcggactatgccaggcaaaaagtccaaatatgaattggcagctgaaatggag
gcaagaaaagcagagccaaaacaggaaaagacaccacagaaaagtgaagctggaagaaga
aaatttagtcccttcaaaagagaagcggataataaaaagaagaattccactcctgataaa
ggaggcacccacaagtctgttaagaaagaagctactgctgttcgaagacttgaagacttc
aaaccgcaacctgcagagaagaaagaggcctcaaagcctggggggaccttggtttctgag
aggagcgaggacggagccgagaagctgctgtgggtagataagtacaaacctacatctctc
aaggcagtaattgggcagcagggcgagcaaagctgtgccaataaactgcttcgatggctc
cggaactggcacaaaaacacagctgaagacagacgagcaaagacaagtaaatttggaggc
aaagatgatggtactagttttaaagcagcgttactttctggcccaccaggagttggtaaa
actactacagctgctttagtttgtgaggagctggggtacagctacgtggagctgaatgcc
agtgatacgcgcagtaaaaacagtctgaaggaagtggttgctgaatcgcttgacaacacc
agcatcagagacttctgttctggctcttcctcatcagttagtgggaagcacgtattgatc
atggatgaagtggatgggatggcaggcaatgaagacagaggagggattcaggagttgatt
ggtttaatcagacacacaaagatacccatcatctgtatgtgcaatgaccgaaaccatcct
aagattcggtctttgtcccactactgtttggatcttcgttttcagcgacctcgtctagaa
cagattaagggtgccatgatgtctattgcatttaaggaaggcttaaaaatcccaccacct
gctatgcatgagataatcttgtcagcaaatcaggacatcagacagattttgcataatctt
aacatgtggtgtgcaaaagataaatcattgacttacgatgaggcgaaaacagatgccagc
aaagccaaaaaggacatcaaactgggccctttcgatgttgtccggaaggtttttgctgct
ggagaggaggcttctcacatgtctcttatagacaaatcagatctgttcttccatgattat
tccctagcacctctctttgtccaagagaattatatacacgtgaaaccggctgccgctgga
gggaatctgaaaaagcacttggtgctcttgagtagagcagctgatagtatatgtgatggt
gatctcgtggacagacagattcgtagcaagcagaactggaatcttcttccaacacaggct
atttattcaagtgttctgccgggggagctgatgagaggatacatgtcccagtttcctgtc
tttcccagctggctggggaaattttcatccacaggcaaacatgatcgcatcgttcaggaa
ctgacaatgcacatgagtctcagaacccagacctgcaagaggacactgaacatggagtac
ctgccctacctgcgggatgcacttgtgaagcccttgcaagacttgggagcagatggcgtg
caagatactgtggcatttatggactcttactgcttgatgaaagaagatgttgaaagtatc
atggaaataagcacctggggaggcaaacccagtcctttttctaaactggatcctaaggtg
aaggcagctttcacccgggcctacaacaaggaggcccatctgaccccgtacgcgctgcct
tctgccaagtcctccaaaaggcaggtgggatccgtggcggcctcagagctgagcgaagac
ttgaacgtggaagagaccccatctgacgaggaggagcaagacactgttgaaaacgacgcc
atgattaagcaaaaaaaggtaaagtcttccaggctgccgaaaccagagaaaaatgaagaa
acaacaaaaaaagaaggtaaaagaaaagagaaaacaaggcgctaa
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integrated database retrieval system
