Tinamus guttatus (white-throated tinamou): 104572173
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Entry
104572173 CDS
T08560
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104572173 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104572173 (CNOT10)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104572173 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_7
TPR_MalT
TPR_17
SCAF11-like_C
RdRP_head
DUF6058
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
104572173
NCBI-ProteinID:
XP_010217630
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MQLLIAAGWRGGQAQALPCSHIVEPDTPEQVLLPAWRILSRRSNHLAMQREVPCCHGVSA
AQYHVVQLANNKSALSRSKYQGSEKHEGTGTSSGITDQEKELSSSALQAFQAGNYDACLQ
HLNTLQDINKDDYKITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVE
NSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKA
LHLLAVLEKMISQGNNNSKNGKSESGNNTNKDSSNQKAESGALIEAAKSKIHQYKVRAYI
QMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKT
GECLRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSPDPAKKFSGRPMC
TLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTS
EQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRN
ALLLLPEDQQEPKQENGSKASNQLGGNAENSESSEACSNKSHEGDKFIAAPPSSPLKKQE
LENLRCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRI
SDAITHLNPENVTDVSLGVSSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLF
NLGSAYCLRSEYDKARKCLQQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQ
LLPSVKTLSELRKKPVFQPVHSIQPIQMPPFTTVQRK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttctcattgcagcaggctggagaggcgggcaggctcaggctcttccttgctct
catatagtagagccagataccccagagcaggttctgctgcccgcctggcgcatcctctcc
aggaggagcaaccacctggcgatgcaaagggaagtgccttgctgccacggtgtttctgct
gctcagtaccatgtggtgcagcttgctaacaacaaatcagctctctccagatcaaaatat
caaggttctgagaaacatgaaggaacaggtacttcttctgggattactgatcaggaaaag
gaactgtcaagcagtgcgttacaagcctttcaggctgggaattacgatgcttgtttacag
cacctgaatacccttcaagacataaacaaagacgactacaagataactttgaatactgct
gttgcagagttctgtaaaagtaaccagactacaacagacaacctgagacagactcttaac
cagctgaagaaccaggttcactctgctgttgaagaaatggatggtttagatgatgttgaa
aatagcatgctttactacaatcaggctgttattttgtatcacctgcggcagtatacagaa
gctatatcagttggagagaagctctatcaatttatagaaccttttgaagagaagtttgcc
caggctgtgtgcttcttgcttgtagacttatacctgttaacttatcaagctgagaaggcc
ttacatctacttgctgttctagaaaaaatgatttcacagggcaacaataacagcaagaat
ggaaaaagtgagtcaggtaataatacaaataaagattcctccaaccagaaagctgaaagc
ggagctttaatagaagcagccaaatctaagatacatcagtataaggtgagagcctatatc
cagatgaagtccctaaaagcatgcaaaagggagatcaagtctgttatgaatacagctggg
aattcagctccttctctctttctaaagagcaattttgaatatttgagaggcaattatcgg
aaagcagtcaaacttttgaacagtgcaaacattgccgaacatccaggcttcatgaaaaca
ggtgaatgcttaaggtgcatgttctggaacaatcttggctgcatccactttgctatggga
aaacacaacttaggaattttttactttaaaaaagctttgcaagaaaacgataatgcgtgt
gcacagctcggaacgggtagtccagacccagctaagaagttttcaggcagacctatgtgt
accctactgactaacaaacgctatgagttgctctacaactgtggaatacaactgctgcat
atcgggaggcccttggctgccttcgagtgcctgatagaggcagtccaagtttatcactcc
aacccgcgtctctggctgcgaatagcagaatgctgcattgctgccaacaaggggacatca
gaacaagaaactaaaggtcttcccagcaaaaagggaatagtgcaatctatagtaggtcaa
ggctaccaccggaagatagtcctcgcatcccagtcaatacagaatgttgtttataatgat
gggcagtcctcggcaattcccgtagccagtatggaatttgcagccatctgtctacgaaat
gccttgcttttgctgccagaagatcagcaggagccaaagcaggaaaacgggtctaaagct
agtaaccagctggggggaaatgcagaaaatagtgaaagcagtgaagcctgcagcaataaa
agtcatgaaggggataaattcattgcagctccaccttcttcgcctttgaagaaacaggaa
ttggaaaatttaaggtgctcaatccttgcctgcagcgcgtacgtggctctggctttgggc
gacaacctcatggcgctgaatcacgcggataagctgctccagcagcccaagctgtcaggg
tccctcaagtttcttgggcacctgtatgctgcagaagctctcatctctctagacagaatc
tctgatgccatcacccacttgaaccctgagaacgtcaccgatgtttccttgggggtctcc
tcgaacgagcaagaccaagggtctgacaaaggagaaaacgaggcgatggagtcttccggc
aagcagaccccgcagtgctaccccagctcggtcacatctgcgcggacgatgatgctcttc
aacctgggcagcgcctactgcctgcgcagcgagtacgacaaggcgcgcaagtgcctgcag
caggcggcttcgctgatccatcccaaagagatccctccagaggctattctgctggctgtg
tatcttgagttacagaatgggaacacgcagctggccttgcagatcatcaagaggaaccag
ctcctgccctcggtgaagacgctctcggagctgcgcaagaagcccgtgttccagcccgtc
cactccatccagcccatccagatgccgcccttcaccacagtgcagaggaagtga
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