Tinamus guttatus (white-throated tinamou): 104572313
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Entry
104572313 CDS
T08560
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104572313 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104572313 (SMARCC1)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104572313 (SMARCC1)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104572313 (SMARCC1)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104572313 (SMARCC1)
PBAF complex
104572313 (SMARCC1)
GBAF(ncBAF) complex
104572313 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
SpeFL
Motif
Other DBs
NCBI-GeneID:
104572313
NCBI-ProteinID:
XP_010217768
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
ADEWLRPVMKKDKQVLVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTD
VFNEWMNEEDYEVDENRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPT
PVESRKKTGKKGQAALYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDS
ENTPVKGGTVADLDEQDEETVTTGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYA
SWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNL
TGDVCAVMRVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQ
VPAAQQMLSFPEKNKEKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEAL
EMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPV
MSTVAFLASVVDPRVASAAAKAALTEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPT
YGLESSCIAGTGPDEPEKIEGAEEEKMETETDGQQPEKVENKGESETEEGDKVQEGENER
NPEKEQDSEVTAEVKPEEKEAEENKENVDASKDKENEAGKKKVEHEISEGNVATAAAAAL
ASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEAV
NT seq
2143 nt
NT seq
+upstream
nt +downstream
nt
gcagatgaatggttgagacctgtgatgaaaaaagacaagcaggtgctggtacactggggt
ttttttccagacagctatgacacttgggttcatgctaatgaaatagatgctgaaattgag
gatcctccaattcccgagaagccatggaaggtgcatgccaagtggattttggacacagac
gtattcaatgagtggatgaatgaagaggattatgaggtagatgaaaacaggaaatcagtg
agttttcgacagagaatctccatgaaaaatgaagagcctgtacgtagtccagagagaaga
gataggaaagcggcagcaagtacaaggaagaggaagcattctccctctcctcctcccact
cccgtggaatcgagaaagaagacagggaagaagggccaagcagccttatatgggaaaagg
agagggcaaaaagaagaagatgaacaagaagatcttactaaggacatggaggaccccaca
ccagttcccaacatagaagaagtggtccttcccaaaaatgtgaacccaaagaaagacagc
gaaaacacacctgtgaaaggaggaacagtagcagacctagatgagcaggatgaggagacg
gtgacaactggaggaaaggaagatgaagaccctaacaaaggtgaccaaagtcgatcaatt
gatccaggtgaagataacgtcacagaacaaactaaccacatcattattccaagctatgca
tcatggtttgactacaactgtattcatgtgattgaacgtcgtgctctccctgaattcttc
aatgggaaaaacaagtccaagaccccagaaatatacctggcctaccgcaacttcatgatt
gacacctatcggttaaaccctcaggagtacttgactagcactgcttgccgaaggaacctg
actggagatgtgtgtgctgtcatgagagtccacgcgtttctggagcagtggggtctcatc
aactaccaggtggacccagaaagccgtcccatggccatgggccccccgcctactcctcac
ttcaacgtgcttgctgataccccctccgggctcatgcccctgcacatccgcactccgcag
gttccagctgctcagcagatgttgagttttcctgagaaaaacaaagaaaagcctactgat
ctgcagaactttgggcttcgcacagatatttattcaaaaaagaccttggcaaagagtaaa
ggtgcaagtgctggaagagaatggacagagcaagagacactgctgctattagaggctctg
gagatgtacaaagatgactggaacaaagtctcggagcacgtggggagccgcactcaggac
gagtgtattcttcacttcctgaggctgccgatcgaggacccctacttggagaactcggac
gcgtccctgggcccgctggcctaccagcccgtgccgttcagccagtctggaaaccccgtg
atgagcaccgtggccttcctggcctccgtggtggatccccgcgtggcgtccgccgcagca
aaggctgctttaacagaggagttttctcgagtcagagaggaggtacccctggagctagtc
gaagctcacgtaaagaaagtacaggaggcagcaagagcctctgggaaggtggatccaaca
tatggcctggagagcagctgcattgccggaacaggtccagatgagccggagaagatcgaa
ggagctgaagaagaaaaaatggaaacagagacagatgggcaacagcctgagaaggttgaa
aacaaaggggaaagtgaaactgaggaaggtgataaagtgcaagaaggagaaaatgagaga
aatccagaaaaagagcaagatagtgaagtgactgccgaagtcaagccagaagagaaggag
gccgaagagaacaaggagaacgttgatgctagcaaagacaaagaaaatgaggctgggaag
aagaaagtggaacacgaaatctcagaaggaaacgtagctacagctgcagctgctgctctt
gcctcagctgccaccaaagccaagcacctagcagcagtggaagaaagaaagatcaagtcc
ctggtggcccttttggtggaaacacagatgaagaagctggagataaaacttcgtcacttt
gaggagttggagaccatcatggacagagagaaagaggcagtaa
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integrated database retrieval system
