Tinamus guttatus (white-throated tinamou): 104572456
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Entry
104572456 CDS
T08560
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgt03036
]
104572456 (DICER1)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104572456 (DICER1)
microRNA pathway
RISC loading complex
104572456 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
SLFN-g3_helicase
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
104572456
NCBI-ProteinID:
XP_010217920
UniProt:
A0A099YUK1
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTILKNEYLSLSNINLLVFDECHLA
IQDHPYREIMKICEDCPSCPRILGLTASILNGKCDPELEEKKQKLEKILKSNAETATDLV
VLDRYTSQPCEIVVDCGPYTDKSGLYGGLLKELDEALTFLNDCNISVNSKERDSTLISKQ
ILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEE
HFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDED
EEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITG
HGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPT
EYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETET
EPIIDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDH
TFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVK
YEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPL
PDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQ
MLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDIE
KSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFP
SPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRK
AKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGVG
VKSLPADFRYPNLDFGWKKSIDSKSFISIPNSSLVENENYCKHSPIVVPENAAHQGANRT
SSTEKHDQMSVNYRTLLNESPGKLQIDVSAELAAINGVSYNKNLANGNCDLVNSDFCQGN
QLNYCRQEIPVQPTTSCPIQNLYSSENQPKPSNECTLLSNKYLDGNANRSTSDGCPKTAV
TTSTSKALNLSIDRVDFEKSPSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYIVNQDKSNTDKWEKDEMTKENLANGKLGDYEEEEEDEDLMWRLPKEEADFEDDFL
EYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSNYEWKAPKKSSLGNVQFSSDFDDFDY
SSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIADCV
EALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCAARENCSSQQKNLSPNSVS
ASVVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFERKINYSFKNKAYL
LQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNT
IFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIE
VPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE
TAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccctgctttgcaatccctcagcatggcaggactgcagctcatgacccctgct
tcttccccaatgggtccgttttttggactgccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca
atagtctgtttaaacactggctcagggaagacttttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatttcaacaaaaatggaaagagaaccgtgttcttggtc
aactcagcaaatcaagttgctcagcaagtgtcagctgtcaggacacattcagatcttaaa
gtgggagagtattcaagtttagagataactgaatcatggacgaaagagaaatggagtcag
gaattctctaaacatcaggttctagttatgacatgtcacgttgccctgactattttgaaa
aatgaatatttatccctgtcaaacattaatcttttggtgtttgatgagtgccatcttgca
atccaggaccacccgtatcgtgaaattatgaagatctgtgaggattgtccgtcatgtcct
cgaatcctggggttaacagcttccattttaaatgggaaatgtgatcctgaattggaggag
aagaaacagaaactggagaaaatcttgaagagcaatgctgaaactgcaactgatttggtg
gtcttggacagatatacttctcagccatgtgagattgttgtagactgtggaccatatact
gacaaaagtgggctgtatggaggactgttaaaagaattggatgaagcacttacttttctg
aatgactgcaacatatctgtaaattcaaaagagagagattctacattaatttctaagcag
atattgtcagactgtcgagctgtattggttgttctgggaccctggtgtgcagataaggta
gctgggatgatggtgagagagctacagaagtatatcaaacacgaacaagaggagctgcac
aggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaagag
cacttctcacctgcctcacttgacctgaaatttgtaaccccaaaagtaataaagctgctt
gaaatcttgcgcaaatataaaccgtatgaacggcagcagtttgaaagtgtggaatggtat
aacaataggaatcaggataattatgtgtcttggagtgattctgaagatgatgatgaggat
gaagaaattgaggagaaagagaagccggagactaatttcccatctccttttactaatatt
ttatgtggaattatttttgtggaaagacgatacacagcagttgtcctaaataggttgata
aaagaagctggcaaacaagatccagaactggcttatatcagcagcaattttataactgga
catggcattggcaagaatcagcctcgtaacaagcagatggaagtagaattcagaaaacag
gaagaggttcttagaaaatttcgagcacatgagaccaacttacttattgctactagcatt
gtagaagagggtgttgacataccaaaatgcaacttggtggtgcgttttgatttgcccaca
gaataccgttcctatgtgcagtcaaaaggaagagctagagcaccaatttccaattatatc
atgttagcagacactgacaaaatcaaaagctttgaggaagatctcaagacatacaaagca
atcgagaagatcctgagaaacaaatgctcaaaatctgttgataccagcgaaactgaaacc
gaacccatcattgatgatgatgatgtatttccaccctatgttttgaggccagatgagaac
agtccaagagttacaattaacactgctattggacacataaataggtactgcgctagatta
ccaagcgatccatttactcacctagctcccaagtgcaaaacacgagaactacctgatcat
accttctactctactctctacctgccgatcaactcacctcttcgagcctcaattgttggt
cctccaatgagttgtgcaagactggctgagagagttgtggctcttatttgctgtgaaaaa
ctgcacaaaattggtgaactggatgatcatttgatgccagttgggaaagaaacggttaag
tatgaggaagagcttgatttacatgatgaagaggaaaccagtgttccaggaaggccaggc
tctacaaaacgaagacagtgctatcctaaagctattccagaatgtttgagggatagttat
cccaaacctgatcaaccttgttacctgtatgtaataggaatggtgttaactactccttta
cctgatgagctcaacttcaggaggcgaaagctgtaccctccagaagatacaacaagatgt
tttggaatactgacagccaaacctatacctcagattcctcactttcctgtgtatactcgc
tctggagaggttacaatatctattgagctaaagaaatctggttttactttgtctctgcaa
atgcttgagttgataacacggctccaccagtacattttttcacatattcttcgtcttgag
aaacctgcactagagtttaaacccacagaagctgattcagcctattgtgttctacctctt
aatgttgttgatgactccagcactttggacattgactttaagtttatggaagacattgaa
aaatccgaagcgcgtacaggcattcccagcacacagtatacaaaagaaatgccttttatt
ttcaaattagaagattaccaggatgcagttatcattccaagatatcgaaatttcgatcag
cctcatcgattctatgtagctgatgtatacactgatcttactccactcagtaaattccct
tctcctgaatatgaaacttttgctgaatattataaaacaaagtataatcttgacctgacc
aatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttgact
cctcgccatttgaaccagaagggtaaggcacttccactaagcagtgctgagaagagaaaa
gcaaagtgggaaagtctgcagaataagcagatactggttccagagctctgtgctattcat
cctattccagcatcactgtggagaaaagcagtttgcctccccagcatcctttatcgtctg
cactgcctgttgacagcagaggaactaagggctcaaacagccactgatgctggtgtgggg
gttaaatcacttcctgcagatttcagatatcctaacctggactttggatggaaaaaatct
attgacagcaaatccttcatctctattccgaactcctctttggtagagaatgaaaattac
tgtaagcacagcccaattgtagtccctgaaaatgctgcacatcaaggtgctaacagaacc
tcttctacagaaaagcatgaccaaatgtctgtgaattacagaacattgctcaatgagtca
cccggtaaactccaaattgatgtctcagcagaacttgcagcaattaatggtgtttcttat
aacaaaaaccttgccaatggcaattgtgatttagttaacagtgacttttgccaaggaaat
cagctgaattactgcaggcaggaaatacctgtacaaccaactacctcatgtcccattcag
aatttatacagcagtgagaaccagcccaagcccagcaatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacagatctacctcagatggatgccccaaaacggcagtg
accaccagtacttcaaaagctcttaatctttcaatagacagagtggattttgaaaagagc
ccttccagcgggtactcctcaaaaactcttggccccaatcctggtctcattcttcaagct
ttgactctttcaaatgctagtgatggttttaatctggagcggcttgaaatgcttggcgat
tcatttttaaagcatgccatcactacatacttgttttgcacttaccctgatgctcatgag
ggacggctgtcatatatgagaagcaaaaaggtcagcaactgtaatttgtatcgccttggg
aaaaagaaaggactgcctagtcgcatggtcgtatccatttttgacccccctgtcaattgg
cttccacctggttacatagtgaaccaggacaagagcaacactgataaatgggagaaggat
gaaatgacaaaggagaatttggctaatggtaaacttggagattatgaggaggaggaggaa
gatgaagacctgatgtggaggttacccaaggaagaagcagactttgaagatgattttttg
gaatatgatcaggaacatatcaaattcatagataatatgttaatgggatcaggggctttt
gtgaagaaaatttctctctcgcccttttcaaccactgattcaaactatgaatggaaagca
cccaaaaagtcatccctgggtaatgttcagttttcatcggatttcgatgattttgactac
agctcttgggatgcgatgtgctacctggatcctagcaaggctgttgaagaggatgatttt
gtagtgggcttctggaacccatcggaagaaaactgtggcgttgatgcaggaaaacagtct
atctcgtatgacttgcatacggagcagtgcatcgctgacaaaagcatcgcggactgtgtg
gaagccttgttgggctgctacctgaccagctgtggcgagagagctgcgcagcttttcctg
tgttcactggggctgaaggtgctccctgtgattaagaagactgattgggaaagcactttg
tgtgctgccagagagaactgtagcagtcagcagaaaaatctttcaccaaactctgtttct
gcttctgtagttaattcagagccctctctgtataaagacctggagtatggctgcttgaag
attccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctgaatcatcttatt
tctggctttgaaaacttcgagaggaaaataaattacagtttcaagaacaaggcttatctt
cttcaggcatttactcatgcctcttatcattacaataccataactgattgttaccagcgc
ctagaattcctgggagatgcaattttggactacctcataaccaagcacctttatgaagac
ccacggcaacactctccaggagttcttaccgacctgcggtctgctctggtcaataacacc
atctttgcatcactggctgtaaagtatgactaccacaagtacttcaaagccgtctctccc
gagctgttccatgttattgatgactttgtacagtttcaaatggaaaagaacgaaatgcaa
ggaatggattcggagctcagaagatctgaagaagatgaagaaaaagaagaagacattgaa
gtaccaaaggccatgggggatatattcgagtcccttgctggtgccatttatatggatagt
ggaatgtctttggaaatggtttggcaagtgtactatccgatgatgaggccactaatagaa
aagttttctgcaaatgtaccccgttccccagtgcgagagctgctggagatggaaccagag
acagccaaatttagtcccgcagaaagaacttacgatgggaaggtcagagtaacggtggaa
gttgtaggaaagggcaagtttaaaggtgttggcagaagctacaggattgccaaatctgca
gctgcaagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaacagctga
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integrated database retrieval system
