Tinamus guttatus (white-throated tinamou): 104572789
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Entry
104572789 CDS
T08560
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt02010
ABC transporters
tgt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104572789 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104572789 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgt02000
]
104572789 (ABCA1)
Transporters [BR:
tgt02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104572789 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104572789
NCBI-ProteinID:
XP_010218265
LinkDB
All DBs
Position
Unknown
AA seq
2313 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SLKDVQMVLGKLRKLKRSGSDLKLRDFLVDNETFSDFLRRNASLPPSAAEELLDAGINLQ
QALILMPLSSIGHANPYPQIPDFPCVYDLYEVFAMLGLAYPNPLLTLLKKSGYQVVVSGY
RMRLRDLCNASTLSEFLTIQNQTVAMDFETFVCTLPKEKLHAAEQVFHANLDPLKPLRTR
ISFNSSLWDLSETVEAVTESFGKLLNELQSMRSWSDMRQEVMFLTNVNGSNSSTQIYQAV
SRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEDVNFYDNSTTPYCNELMKNLESS
PLSRIIWRALKPLLIGKVLYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMWEEISPKIWT
FMESSQEMDLIRTLLKSKDLWDLQLPTSNWTVDDIARFLSKNPGELETANGSVYTWMDAF
NETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGVVFPEMAPNSLEL
PHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVQ
TGTEKTTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLK
ETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFVFLSIFAVV
TILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYISFSLKIFASLLSPVAFG
FGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAAMMLFDTFLYGVMTWYIESVFPG
QYGIPRPWYFPFTKSYWFGEEPQERQHPHPDQKGPSEVCKEEEPMHLSLGVSIQNLVKVY
RDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILGKDIRSEL
SAIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPENKVKEEMEQMATDVGLPHKLKAR
TSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTH
HMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSCRNSSSTV
SYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDIGHELTYVLP
YKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAETSDGTLPAR
RNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQMKGWKLTQQQ
FVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQPWMYDEQY
TFISNDAPDDAGTQKLLDALLNKPGFGTRCMQGHTIPDTPCTVGQKEWTTASVPDSVRDI
FLKGNWSMQNPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNLTGRNISDY
LVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIEHVRNILELAQGS
SGDRFLNSLGSFMKGLDTKNNVKVWFNNKGWHAIASFLNVMNNAILRANLQQGKNPSAYG
ITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQ
FISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLALLLFLYGWS
ITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFL
IFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFVITV
LIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKIYRMKRKPA
VDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSNIQEVHQNM
GYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKYAGNYSGG
NRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECE
ALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFGLAFPGSVL
KEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDD
HTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctggggctgctgctgtggaaaaacttcacctacagaagaaga
cagacttttcagctgctgattgaagtcgcttggcctctttttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgaacagcatgaatgtcacttcccaaacaaagcc
atgccctcagctggaacactgccttggatacaggggatcatctgcaatgccaacaacccc
tgcttccgctacccgacccctggagagtcccccggcatcgttggaaacttcaacgcctcc
attgtttcccgcctgttctcggatgccaagaggttactcttgtacagccagcaggacacg
agcttaaaggacgtgcagatggtgctgggcaaactgcggaagttgaagaggtctggctca
gacttgaagctccgggatttcctggtggacaacgagaccttctcagacttcctccgccgc
aacgcgtccttgccgccctccgcagcagaggagctgctcgacgcgggcatcaacctgcag
caggctcttatattgatgcctctgtccagcatcggacatgcaaacccctatccccaaatc
ccagattttccctgtgtttacgacctgtatgaagtgtttgccatgctgggcttagcatac
ccaaatccactgctgaccctgttgaagaaatctggctatcaagttgttgtgtctggctac
cgcatgcggctgcgagatctctgcaatgcctcaacgctgtccgaatttcttacaatccaa
aaccagacggtggccatggactttgaaaccttcgtttgcaccttgccaaaggagaaactc
cacgcagcagaacaggtcttccatgctaacctggaccctttgaagcctcttcggacacgg
atctccttcaattcttccttgtgggacctgtcggaaaccgtggaggctgtgacagagagc
tttgggaagcttcttaatgagttgcagagcatgaggagctggagcgacatgaggcaagag
gtgatgttcctgaccaacgtgaacggctccaactcctccacgcagatttaccaggcggtt
tcacgcattgtgtgcggccaccccgaaggtggagggctcaaaatcaaatccctcaactgg
tacgaggacaacaattacaaagcactgtttggagggaacaacactgaagaagatgttaac
ttctatgataactccacaacaccctactgcaacgagctgatgaagaacctggaatccagc
ccgctctccagaattatctggagggctctgaaaccgctgctgattgggaaggtcttgtac
actccagacacaccagctgtaaggaaggtcatgtctgaggtgaacaggacgttccaggag
ctgggtgtgtttcgtgacctcggcgggatgtgggaggagataagcccaaagatttggaca
ttcatggaaagcagccaggaaatggacctgattcggacgctactgaagagcaaagatctc
tgggacctgcagttgcctacttcaaactggaccgtggatgacattgcccgcttcttgtcc
aagaacccgggggagctggagacggccaatggctccgtgtacacctggatggacgccttc
aacgagaccgaccgggctattcagaccatctcgcgcttcatggagtgtgtcaacctggac
aaactggagcctgtggcaacagaagtccggcttataaacaagtccttggagctgctggat
gaaaggaggttctgggctggcgtcgtcttccctgaaatggctcctaacagcttagagctc
cctcatcacgtcaaatacaagatacggatggacattgacaatgtggaaaggaccaacaag
ataaaggatgggtactgggatcctggtccccgggctgacccctttgaggacatgcgctac
gtttggggaggctttgcctacctgcaggacgtggtggaacaggccatcatcagagtgcag
acaggcacggagaagaccaccggggtttatgtgcagcagatgccctatccgtgctacgtg
gatgacatatttttgcgtgtcatgagccgctccatgcccctcttcatgactttggcttgg
atctactcagtggctgtgattatcaagggtattgtgtatgagaaggaagcccgactgaag
gagacgatgaggattatgggcttggacaacggcatcctgtggctgagctggttcatcagc
agcctcatcccactcctgatgagtgctggcctgctggttctgatcctcaagatggggaat
ctgctgccctacagcgaccctagcgtggtgttcgttttcctctccatctttgccgttgtg
accatactgcagtgcttcctcatcagcaccgtgttctccagggccaacctggcagctgcc
tgtggaggcattgtctacttcacgctgtacctgccctacgtgctctgtgttgcctggcag
gactacatcagcttctcgctcaagatctttgcgagcctgctgtctccagtagcctttggc
ttcggttgtgagtactttgcactgtttgaggagcagggagttggtgtacagtgggacaac
ttctttgagagcccattggaagaagatggctttagcatcaccacatctgctgccatgatg
ttgtttgacaccttcctgtatggggtcatgacttggtacattgagtctgtcttcccaggc
cagtatgggatccccagaccctggtactttcctttcacaaagtcctattggtttggtgag
gaaccacaggagaggcaacaccctcatcctgaccagaaggggccttcagaagtgtgcaag
gaggaagagcccatgcatctgagccttggagtttccatccagaacctggtcaaggtttat
cgtgatggcaagaaggttgctgtagatggtctcacactgaacttctacgaagggcaaatc
acctcctttctgggacataatggagcagggaaaactactaccatgtccatcttgactggc
ttgtttcctccaacctcgggcacagccttcatcctgggcaaagatatccgctctgagctc
agcgccatcaggcagaacctgggtgtctgtccacaacacaacgtgctgtttgacttgctg
actgtggaggagcacatctggttctatgctcgtctcaaagggctgccggaaaacaaggtg
aaggaggaaatggagcagatggcaacggacgttggtttgcctcacaaactcaaagctaga
acaagcaaactctccggtggcatgcagaggaaactctcagttgccttagcctttgttggt
ggctccaaggtcgtcattctggatgaacccacagctggggtggacccttactctcgcagg
ggaatatgggaattgctgctgaaatatcggcaaggtcggaccatcattctctccacacac
cacatggatgaagcagacatcttgggtgaccgcattgccatcatttctcacggcaagctg
tgctgtgttggctcttctctgttcctgaagaaccaactgggaacaggctattatttgacc
ctggtgaagaaggacgtggattcctctctgagctcctgccgaaacagcagcagcacggtg
tcttatctaaaaaaggatgatagtgtctcgcagagcagctctgatgctggccttggcagt
gaccatgaaagtgacactttgaccatagatgtctctgcaatctcaaatctgattacaaaa
cacgttcctgaggctaggctggtggaggacattggacacgagttaacttatgtcttgcca
tacaaagctgctaaagagggagcttttgtggagctgttccatgaaattgatgatcgtctc
tcagatcttggcatttccagctatggcatttctgaaaccaccctggaggagatcttcctc
aaagtggctgatgatagtggtgtggacgcagagacctcagatgggaccttgccagccaga
aggaacaggcgtgtgtttggagacagacagagctgccttcgtccatttacagaggatgat
gcctttgaccccaacgattcagacatagatccagcagaatccagagagaccgaccttctg
agcgggatggatggcaagggctcctaccagatgaagggctggaagctcacgcagcagcag
ttcgtggctctgctgtggaagaggctgctcatcgccaagcggagccggaagggtttcttt
gctcagattgtgctgccagctgtgtttgtgtgtattgctctcatgttcagcctgattgtt
cctcccttcgggaagtatcccagcttggagctgcagccctggatgtatgatgagcagtac
acttttatcagcaatgacgctccagacgatgcaggcactcagaagcttttggatgccctt
ctcaataagcctggctttgggacacgctgtatgcagggacacaccatcccagacactcct
tgcacggttgggcagaaggaatggaccacggcttcggtgccagactccgtgcgggacatc
ttcctgaagggcaactggagcatgcagaacccttccccgtcgtgcgagtgcagcaacgag
aagatcaagaagatgctgcccgtgtgtccccccggggcgggcgggctgcctcccccacag
cgagagcaagacactgctgacatcctccagaacctgacaggacgcaatatatcggactat
ctagtgaagacctacgcgcagatcattgggaaaagcttaaagaataagatctgggtgaat
gagttcaggtatggtggcttttccctgggagccagcagttccctcatgcttcctccaagc
catgaagtcactgatgcaattgaacatgtgaggaacatcttggaactagcacagggaagt
tctggagatcgttttctcaacagcttgggaagtttcatgaaaggcctggatacaaagaac
aacgtaaaggtgtggttcaacaacaagggctggcatgccatcgcctccttcctgaacgtg
atgaacaacgcgatccttcgggccaacctgcagcagggcaagaaccccagtgcttacggg
atcactgccttcaaccaccccctcaacctcaccaagcagcagctctccgaagtggccctg
atgaccacgtctgtggatgtcctcgtctccatctgtgtgatctttgccatgtcctttgtt
cctgccagctttgtggtcttcctcatccaggagcgcgtcagcaaggccaaacacttgcag
ttcatcagcggggtgaagccagtgatctactggctggccaactttgtctgggatatgtgc
aactacattgttccagcaacgctggtcatcatcatcttcatatgcttccagcagaagtct
tatgtgtcctcctccaacctgcctgtgctggccctccttttgtttctctatgggtggtcg
atcacccctctcatgtacccagcctccttcgtgttcaaaatccccagcacagcatatgtg
gtactgaccagcgtgaatctcttcattggcatcaacggcagcgtggccacctttgtcctg
gagctcttcactaataataagctgaacaacatcaatgacatcctgaagtcggtcttcctc
atcttcccgcacttctgcctggggcgaggactcatcgacatggtgaaaaaccaggctatg
gctgatgctctggagaggtttggagagaaccgctttgtgtctcctctctcgtgggacctg
gtggggaggaacctctttgccatggcggtggagggcgtagtcttcttcgtcatcaccgtg
ctcatccagtacaggttcttcatcaaacccaggcctgtctatgccaagctccctcctgtg
aacgatgaagatgaggatgtaaccagagagaggcagaggataatcagtggcggaggacag
agtgacatcctggaaatcaaggagctgaccaagatttacagaatgaagcgaaagccggca
gttgatcggatctgtgttggaatcccccctggagagtgcttcgggctcctgggagtaaat
ggtgctggcaagtcatccacgttcaagatgctaactggtgacacagatgtgacaggagga
gaagctttcctcaaaggaaacagtatcttgtccaacatccaagaagtccaccagaacatg
ggctactgcccacagtttgacgctgttaatgaactgctgacggggcgagaacatctggag
ttcttcgcgctcttgagaggggtcccagagaaagaagtctgcaaggttggcgaatgggcc
attcggaaactgggcctcgtgaaatacggagaaaaatacgcagggaactacagtgggggc
aacaggcgcaagctctccacagcaattgccctcattgggggtcctcccgtggtgttcctg
gacgagccgaccacagggatggatcccaaggcgcgccgtttcctgtggaactgtgctctg
agcgtcatcaaggaggggagatccgtggtgctcacgtctcacagcatggaagaatgcgaa
gccctgtgcacgcggatggccataatggtcaacgggcggttccggtgcctgggcagcgtc
cagcacctcaagaacagatttggagatggttataccatcgtggtgagaattgcaggggca
aacccagacctgaagccggttgaggaattctttgggcttgccttccctggaagtgtcctg
aaggaaaagcatcggaatatgcttcagtaccagcttccttcttcaccatcttccctggcc
agaatatttagcatcctctcccagaacaaaaagagactccacatagaagactactccgtt
tctcagaccactcttgaccaagtatttgtaaattttgctaaggaccaaagcgacgacgac
cacactaaggacctgtcattgcacaaaaaccagactgtggtagatattgcaatccttaat
tcgttcctgcaagatgagaaggtgaaagaaagttgtgtgtaa
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integrated database retrieval system
