Tinamus guttatus (white-throated tinamou): 104572900
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Entry
104572900 CDS
T08560
Symbol
CHD1
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104572900 (CHD1)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104572900 (CHD1)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104572900 (CHD1)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104572900 (CHD1)
SLIK complex
104572900 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
104572900
NCBI-ProteinID:
XP_010218368
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKVQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQQKAASSDSGSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSASGTGSDSESEEDGEKSSCEESESDY
EPKNKVKSRKPPSRIKPKSGKKSAGQKKRQLDSSDDDEDDDDDDDDYDKRGSRRQATVNV
SYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRFGRKGATGAATTIYAVEAD
GDPNGGFEKSQEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHENLE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK
SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEAL
QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFK
VANFSNMDEDDIELEPERNSRNWEEIIPEDVFLTSXVNLFKHFKYVTLNYFLCNYRSAXN
GSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSGPERAGGRLGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKSIPADPEERKRYVVPCHTKAAHFDIDWGKEDDSNLLIG
IYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQR
LAGAGNSKRRKARTKKNKVLKAVKVKEEIKSDSSPPPSEKSDEDDEEDNKDEIVSVKNPH
KKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDIKEKR
ENKVKESTQKEKEVKEEKVNETKSENKEKTKKVPLSDTPVHITASSQPVPISEESEELDQ
KTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVER
LKENTNHDDSSRDSYSSDKHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWD
HYKQDSRYYGDSKHRKLDDHRSRDHRSNLEGCLKDSRPHSDHHSHSDHRIHSDHRSSSDY
SHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEH
LWSSRKT
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgtaagaaacagtagtggagagtcaagccgatcg
gatgatgattctgggtcagcatcgggttctggatctggttcaagctctggaagcagtagt
gatggaagcagcagccagtcaggtagcagcgactctgactctggatctgagtcaggcagt
cagtcagagtccgaatccgacacatcgagagagaagaaagttcaagctaagccaccaaaa
gttgatggatctgagttttggaagtccagtccaagcatacttgccgtgcagagatcagca
gtgctcaagaagcagcagcaacagcagcaaaaggcagcttcatcagacagtggttcagaa
gaggactcatctagtagtgaagattctgcagatgactcatccagtgagaccaagaagaaa
aaacataaagatgaagactggcaaatgtctggatcagggtcagcatcaggaactggctcc
gattctgaatcagaggaagatggggagaaaagcagttgtgaagagagtgaatctgactat
gagccaaaaaacaaagtcaaaagccggaagcctccaagcagaattaagccaaaaagtggc
aaaaagagtgcaggacagaaaaagaggcagcttgattcatcagatgatgatgaggacgat
gacgacgacgatgatgattatgataagagagggtctcgtcgccaggcaacagtcaatgtt
agttacaaagaagctgaagaaactaagacagattctgatgatctgctggaagtctgtgga
gaagatgtcccacaacctgaagaagatgaatttgaaactatagaaaagttcatggatagt
cgatttggccgaaaaggagccactggtgctgcaaccaccatctatgcagttgaggcagat
ggtgatccaaatggtgggtttgaaaaatctcaggagccaggcgaagtacaatatcttatt
aaatggaaaggctggtcccacatccataatacctgggaaactgaagaaacactgaagcaa
caaaatgttaaaggaatgaagaagctggacaattataagaaaaaggatcaggaaacaaaa
cgatggctgaaaaatgcttctccagaagacgtggaatattataactgccagcaggaactt
acagatgatctacataaacaatatcaaatagtggaaagaataattgctcattcaaatcag
aaatctgcagctggttatccagattactattgcaaatggcagggtctgccttactcagaa
tgtagctgggaagatggtgctctcattgctaaaaaatttcaggcacgcattgatgagtat
tttagcagaaatcagtccaagacaactccctttaaggactgcaaggttctgaaacagagg
ccaaggtttgttgcactaaaaaagcaaccatcttatattggagggcatgagaatttagaa
ttaagagattatcagttaaacggattgaactggcttgctcactcatggtgcaaagggaat
agttgtattcttgcggatgaaatgggtttaggtaaaacaatacaaacaatttcctttctg
aactacctgtttcatgaacaccaactatatggacctttcttgctggttgtgccgctttct
accttgacatcttggcaaagagagattcagacttgggctcctcagatgaatgctgtggtt
tacttaggagatataactagcagaaatatgataagaactcatgaatggatgcatccacag
accaagcgattaaaatttaatatacttctaacaacttatgaaatcttgctgaaggataag
tcattccttggtggtctgaattgggcatttataggagtggatgaagctcatcgtctgaaa
aatgacgattcccttctgtacaagactttaatagactttaagtctaaccatcgtcttctt
attactggaactcctctgcaaaactccctcaaagagctttggtccttgctgcacttcatc
atgccagaaaagttttcttcctgggaagactttgaagaggagcatggcaaagggagagag
tttggttatgcaagtctccacaaagaacttgaaccatttctactgagaagagttaaaaaa
gatgtagaaaagtctttacctgctaaggttgaacaaattttgaggatggaaatgagtgca
ttgcagaagcaatattacaagtggattttaaccaggaattataaagccctgagtaaaggt
tcaaaaggcagtacatcaggctttttgaacatcatgatggaactcaagaagtgttgtaac
cattgctacctcattaaaccaccagatgataatgaattctataataaacaggaggcctta
cagcatctaatacgtagcagcggaaaactaatccttcttgacaagctactgattcgtctg
cgagaacgtggcaacagagttttgattttctctcagatggtgaggatgctggacatccta
gcagagtatttgaagtatcgccagtttccctttcaaagacttgatggatcgataaaaggg
gaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgcttt
ttactgtctaccagagctggaggattaggtataaacttggcatctgctgacactgtggtt
atatttgattctgactggaatccacagaacgatctgcaagcgcaggccagagcccatagg
attgggcagaagaaacaggttaatatttatcggctagtcacaaaagggtcagtagaagag
gatatacttgaaagagccaagaagaagatggtgttagatcacttagtaattcagagaatg
gacactacagggaaaactgtgctacatacagggtctactccttcaagctcaacacccttt
aataaggaagagttatcagcaattttgaagtttggtgctgaggaactttttaaagaacct
gaaggggaagaacaggagccccaggaaatggatatagatgaaatcttgaagagggctgaa
acacgagaaaatgagccaggcccattaactgtaggagatgagctgctttcacagttcaag
gtggccaatttttccaatatggatgaagatgacatagaattagaaccggagcgaaattca
agaaactgggaagaaatcattccagaagatgtatttttgacaagctaggtaaatttattc
aagcattttaaatatgtcactttgaactacttcctctgcaattacagatcagctnttaac
ggcagtgaaggaaggcgcagtagaaacagaagatattctggatctgatagtgactccatc
tcagaaagaaaacgtcccaaaaaacgtggaagaccacgaactattcctcgggagaatatt
aaaggattcagtgatgcagagattagacggtttatcaagagttacaagaaatttggtggc
ccccttgaaaggttagatgctatagctagagatgctgagctggttgataaatctgagaca
gaccttaggcgcttgggagagcttgttcataatggatgcattaaagctttaaaggacaac
tctggaccagaaagagcaggaggtagacttgggaaagttaaaggcccaacattccgaata
tcaggagtgcaagtaaacgcaaagctggtcatctctcacgaagaagagttggcaccattg
cataaatccattcctgcagatccagaagaaaggaagagatatgtcgtcccatgccacacc
aaggcagctcattttgatatagattggggtaaggaagatgattccaatttgttaataggc
atctatgaatatggttatggcagctgggaaatgataaaaatggatcctgatctcagcttg
acacagaagattttgcctgatgatccagataagaaaccccaggccaagcaattacagacc
cgtgcagactacctcattaaattactgaataaagaccttgcaagaaaggaagcacaaaga
cttgctggggcgggcaattcaaagaggaggaaagcaagaactaagaagaacaaagtgcta
aaggctgtgaaagtaaaagaagaaataaaaagtgactcctctccaccaccttcagaaaaa
tctgatgaggatgatgaagaggataataaggatgagattgtttcagtgaaaaatccacat
aaaaaaataaaagcagaaaaagaaaatgaagaaaagcctgagccagatattggtataaag
aaggaagctgaagaaaaaagagagacaaaagaaaaggagaataagagggatttgaaaagg
gagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatattaaagaaaagaga
gaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaagagaaggtaaat
gaaaccaaatctgaaaataaagaaaaaactaaaaaagttccattgtcagatactccggtt
catattacagcaagtagccagccagttcctatatctgaggaatctgaagaacttgatcag
aagacattcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattgaagcagctg
gatagaccagagaaaggcctttctgaaagggaacagctagaacatactagacagtgccta
atcaaaattggggatcacattactgaatgtctcaaggagtacacaaatcccgaacagatt
aaacagtggaggaagaatttgtggatatttgtctctaagtttacggaatttgatgccaga
aagctgcacaaactgtataaacatgcaatcaaaaaacgccaagagtctcagcaacacaat
gaccagaatattagcagcaatgtgaatacacatgtgattagaaatccagatgtggaaaga
ctgaaagagaatacaaatcatgatgacagtagcagggacagttattcttctgataagcat
ctgtctcaatatcacgatcatcacaaagacaggcatcagggagatgcttataagaaaagt
gactctaggaaaaggccctattcagccttcagcaacggaaaagatcatagagactgggat
cactacaagcaagacagcagatactacggtgatagtaaacacaggaagttggatgatcac
aggagcagagatcacaggtcgaacctggaaggatgtttgaaagatagtcggcctcattca
gaccaccattcccattcagaccacaggatacattcagatcaccgttccagttcagactac
agtcatcataaatcttctagagattataggtaccactcagactggcaaatggaccacaga
gcttctggtagtggcccaaggtcaccgttagatcagaggtctccttatggttcaagatct
cccttaggacacagatctccatttgaacactcatcagatcacaaaagtacacctgaacat
ttatggagtagccggaaaacataa
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integrated database retrieval system
