Tinamus guttatus (white-throated tinamou): 104573331
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Entry
104573331 CDS
T08560
Symbol
SUPT5H
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104573331 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104573331 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104573331 (SUPT5H)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104573331 (SUPT5H)
RNA polymerase I system
104573331 (SUPT5H)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
104573331 (SUPT5H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
KOW2_Spt5
KOW4_SPT5
KOW7_SPT5
KOW5_SPT5
KOWx_SPT5
Spt5-NGN
KOW6_SPT5
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
104573331
NCBI-ProteinID:
XP_010218818
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MDVPNTDVSNGDVPNMIGEERATAIALMRKFIAYQFTDTPLQIKAVVAPEHVKGYLYVEA
YKQTHVKQAIEGVGNLRAGYWNQQMVPIKEMTDVLKVVKEVTNLKPKAWVRLKRGIYKDD
IAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLG
GDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGLDLEVVT
EGTGKEREHNLQPGDNVEVCEGELINLQGKILSVDGNKVTIMPKHEDLKDMLEFPAQELR
KYFRMGDHVKVIAGRFEGDTGLIVRVEDNFVILFSDLTMHELKVLPRDLQLCSETASGVD
VGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKXXXXXXXXXX
IRVKDIVKVIDGPLSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRD
VTNFTVGGFAPMSPRISSPMHPSGAGQRGGFGGGGLGRGRGRRDNELIGQTVRISQGPYK
GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGARRPGAVASAYGRTPMYGSQTPMY
GAGSRTPMADEDFDYGFEEEATPSPQGYGGTPNPQTPGYPEPASPQLGGAYNPQTPGTPA
MYKTEQFSPYSMPCPPCPPMSPCHRVLVPRYNTEQFSPYAVPSPQGSYQPSPSPQSYHQV
APSPVGYQPSHSPASYHPTPSPMAYQGGMCSVYLQEGDKVVSVSSEHLEPVTPTKSNKVK
VILGEDREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKLLEA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccccaatactgatgtctccaatggcgatgtccccaatatgatcggcgaggag
cgcgccacggccatcgccctcatgcgcaagttcatcgcctaccagttcaccgacaccccg
ctgcagatcaaggcggtggtggcccccgagcacgtcaagggctacctgtacgtggaggcc
tacaagcagacgcacgtcaagcaggccatcgagggcgtgggcaacctgcgggccggctac
tggaaccagcagatggtccccatcaaggagatgaccgacgtcctcaaggtggtcaaggag
gtcaccaacctcaagcccaaggcctgggtgcgcctcaagaggggcatctacaaggacgac
atcgcccaggtggactacgtggagcccagccagaaccagatctccctcaagatgatcccg
cgcatcgacttcgaccgcatcaaggcccgcatgagcctgaaagactggttcgccaagcgc
aagaagttcaagcggcccccgcagaggctcttcgatgccgagaagatccggtccctgggg
ggggacgtggcctccgatggcgacttcctcatcttcgagggcaaccgctacagccgcaag
ggcttcctcttcaagagcttcgccatgtcggccgtgatcacggagggcgtcaagcccacc
ctgtcagagctggagaagttcgaggaccagcccgagggcctcgacctggaggtggtgacc
gagggcacaggcaaggagcgcgagcacaacctgcagccgggtgacaacgtggaggtgtgc
gagggggagctcatcaacctgcagggcaagatcctcagcgtggacggcaacaaggtcacc
atcatgcccaagcacgaggacctcaaggacatgctggaattcccagctcaggagctgcgg
aagtacttccgtatgggcgaccacgtgaaggtgatcgcggggcgcttcgagggcgacacg
gggctcatcgtgcgcgtcgaggacaacttcgtcatcctcttctccgacctcaccatgcac
gagctcaaggtgctgccgcgcgacctgcagctctgctccgagacggcgtccggcgtcgac
gtgggcggccagcacgagtggggcgagttggtccagttggacccgcagaccgtgggcgtc
atcgtgcgcctggagcgcgagaccttccaggtgctcaacatgtacgggaaggtggtgacc
gtgcggcaccaggccgtcacccgcaagaagngannnnnnnnnnnnnnnnnnnnnnnnnnn
atccgcgtcaaggacattgtcaaagtcatcgacgggcccctctcgggccgcgagggcgaa
atccggcaccttttccgcggcttcgccttcctgcactgcaagaagctggtggagaacggc
ggcatgttcgtgtgcaagacgcgtcacctcgtcctggccggcggctccaagccccgcgac
gtcaccaacttcacggtgggcggcttcgcgcccatgagcccccgcatcagcagccccatg
caccccagcggggccggccagcgcggtggcttcggcggcggtggcctcggccggggccgg
ggccggagggacaacgagctcatcgggcagacggtccggatctcgcagggtccctacaaa
gggtacatcggcgtggtgaaggacgccaccgagtcgacggcgcgcgtggagctgcactcc
acgtgccagaccatctccgtggaccggcagcgcctcaccaccgtcggcgcgcggcgcccc
ggcgcggtggcctcggcctacgggcgcacacccatgtacggctcccagacccccatgtat
ggggccggctcccggacccccatggcggacgaggacttcgactacggcttcgaggaggag
gcgacgccgtcaccgcagggctacggggggacccccaacccccagaccccggggtacccc
gagccggcgtcaccgcaactgggcggagcctacaacccgcagacgccggggacacccgcc
atgtacaagacggagcagttctcaccctactccatgccatgtcccccatgtccccccatg
tccccgtgtcaccgtgtccttgtccccaggtacaacacggagcagttctcgccctacgcc
gtgccgtccccgcagggctcctaccagcccagccccagtccccagagctaccaccaagtg
gcccccagccccgtgggctaccagccctcgcactcgccggccagctaccacccgacgccg
tcacccatggcctaccagggcgggatgtgctccgtgtacctgcaggagggtgacaaggtg
gtgagcgtgtccagcgaacacctggagcccgtgacgcccaccaagagcaacaaggtcaag
gtgatcctgggcgaggaccgcgaggccaccgggatcctgctgagcatcgacggcgaggac
ggcatcgtgcgcatggacctggaggagcagctcaagatcctcaacctgcgcttcctggga
aagctgctggaggcctga
DBGET
integrated database retrieval system
