KEGG   Tinamus guttatus (white-throated tinamou): 104573355
Entry
104573355         CDS       T08560                                 
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
tgt  Tinamus guttatus (white-throated tinamou)
Pathway
tgt04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tgt00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104573355 (COL5A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tgt00536]
    104573355 (COL5A1)
Glycosaminoglycan binding proteins [BR:tgt00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104573355 (COL5A1)
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 104573355
NCBI-ProteinID: XP_010218849
LinkDB
Position
Unknown
AA seq 1139 aa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NT seq 3420 nt   +upstreamnt  +downstreamnt
atggatggacaaaccggtcccaaggggaatgtgggtcctcaaggtgaaccaggtccccca
ggacaacagggtaatccaggcgcccagggtcttccaggtccacaaggcccaatcggtccc
ccaggagagaaaggcccgctgggcaaacctggtcttcctggcatgcctggtgcagacggt
cctccgggtcatcctggcaaggaaggtcctcctggagagaagggcagtcagggtccacca
ggtcctcagggccccattggatacccagggccacgtggagtcaagggagcagatggtgtt
cgtggactgaaaggtaccaaaggtgaaaagggtgaagatggtttccctggcttcaaaggt
gatatgggcatcaagggagaccggggtgaaattggtcctcctgggcctagaggtgaggac
ggtcctgaaggccccaaaggtcgttctggtcccaatggagatcctggtcctcttggtcct
gctggagaaaagggaaaactcggcgttccaggattaccagggtaccctggaagacaaggt
ccaaagggctcaatcggattcccaggatttccaggagccaacggagagaagggtgcacgg
gggacacctggcaaaccaggtccaagggggcagcgcggtccaacgggtccacgtggtgaa
agaggccctaggggcagcactggaaaacctggtccaaagggcaactctggtggtgacggc
ccccccggtcctcctggcgaaaggggaccaccagggcctcaaggaccaactggatttccg
ggaccaaaaggcccccctggtcctcctggaaaggatggattgcctggtcaccccggacag
cgaggagaaactggtttccaaggcaagaccggccctccaggccctcctggtgtcgtgggc
cctcagggtccgaccggtgagactggcccaatgggtgagcggggacatccaggccctcca
gggccccccggcgaacagggtcttcctggcctcactggaaaggaagggaccaagggtgac
cctggtcccgccggtctcccaggaaaggacggtccccccggcttgagaggcttccctgga
gagaggggcctccctggccccattggtgctccaggcctgaaaggcaacgaaggtccccca
ggccccccaggtccagcaggctctcctggtgagcgaggccctgcgggttcagctggccca
ataggcctgccaggacgcccgggcccacagggacctccaggacctgcaggtgaaaaggga
gccccgggtgagaaaggtcctcaaggaccagctggccgggatggcatccagggccccgtt
ggactcccagggccagcaggtcctgttgggccacccggagaagatggtgacaagggtgag
attggagaacctggtcagaagggcagcaagggcgacaaaggggagcagggtccaccaggt
cctacaggaccacagggtccaatcggtcagccaggcccagcgggtgctgatggagagccg
ggtcccagaggacagcaaggcctctttggtcagaaaggtgatgaaggaccccgaggtttc
cctggtccccccggccctgtaggattgcagggcttgcctggaccacctggtgagaaggga
gaaacaggcgatgttgggcaaatgggcccaccaggcccacctgggcctagaggtccatct
ggaccaccaggagcagacggtccacagggtcctcctgggggaataggaaaccctggcgca
gtaggagagaagggtgaacctggggaatccggtgagcctggtcttcctggggaagttggc
ctcccgggtcctaaaggtgaaagaggtgaaaaaggtgaagcaggtccctcgggtgctgct
ggtccacctggccccaaaggtcccccaggcgacgacggtcccaagggcagccccggccca
gttggctttcctggtgatcctggtcctcctggagaacctggtccagctggtcaagatggt
ccccctggtgacaaaggtgatgatggcgaacctgggcagactggttcccctggtcccaca
ggagagccaggcccctccggaccaccaggaaaaaggggtccccctggtccagctggtcct
gaaggaagacaaggagagaaaggagccaagggtgaagctggtttggaaggacctcctggg
aagactggcccaattggtccccaaggtgctccagggaaacccggccctgatggccttcga
ggaattcctggtccagtcggtgaacaaggtctcccagggtcccctggcccagacggtcct
ccaggcccaatgggtccacctggtttgcctggtcttaaaggagactctggtcccaagggt
gagaagggtcatccaggcttaattggccttattggaccaccaggcgagcagggagagaag
ggtgacagaggcctcccaggaccccagggctcagctggccccaaaggagagcagggtatc
acgggtccttctgggccaattggacctccggggccaccaggattaccgggtccacctggt
cccaaaggtgctaaaggatcatcaggtccaacgggtccaaagggtgaatctggtcttcct
gggcccccaggacctcctggtcctcctggagaagtcatccagcccctgcccatccaggct
tccaagaggaccaggcgcaacatcgatgccagccagctggtggacgatggcaatgcggac
aactatatggactatgcagatggcatggaggaaatttttggctcactgaattccttgaaa
ctggaaatcgagcagatgaagcatcctttgggcactcaacacaacccagctcgcacctgc
aaggacctgcagctctgtcaccctgatttcccagatggtgaatactgggttgatcctaac
caaggatgctctagggactctttcaaagtttactgtaatttcacagctggtggagagact
tgcatcttccctgacaagaaatcagaaggagctagaattacttcttggcccaaggaaaac
ccaggctcctggttcagtgaattcaagcgcggtaaactgctctcctacgtggatgcggac
gggaaccccatcggcgtggtgcagatgaccttcctgcggctgctgagcgcctcggcccgc
cagaacgtcacctacaactgctaccagtccgtggcgtggcacgacgccaccaccgacagc
tacgacaaggccatccgcttcctgggctccaacgacgaggagatgtcctacgacaacaac
ccctacatccgagctgccctcgacggctgcgcggcaaggaaaggctatcagaagactatc
ctggagatcaacacgcccaaggtagagcaagttcctgtagtcgacatcatgttcaatgac
ttcggagaagcgtcacagaaatttggattcgaggtgggaccagcttgcttcttgggctaa

DBGET integrated database retrieval system