Tinamus guttatus (white-throated tinamou): 104573460
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Entry
104573460 CDS
T08560
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104573460 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104573460 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
tgt03016
]
104573460 (ZCCHC7)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
104573460 (ZCCHC7)
Transfer RNA biogenesis [BR:
tgt03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
104573460 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104573460
NCBI-ProteinID:
XP_010218960
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MFDGYEDIEDTEVYEDELYHEESSSEQSIDSEVEFHLYSQIHYSQDLGEISSLEINKEAD
VTEVSGQSSVLTEKLYQDKNVVELPDHDVIQIPDDREIIVLSDTPDEDSVYKSKAKKSAN
SVNSEKKCVHPGISTPNRSKVAESNALDGAESVTKVSRQRKRTSGKLSSVTSTRTLQEVM
VIDDSSNTEEESLISESDNVESWMLLECSTDDKDEDILLNLEGCGTSVGEGEAAVDWSIS
NKDAEAQICNYAPTRRTSVRYYTADKNVTCRNCGKTGHLSKNCPIPRKIPPCCLCAERGH
LQNTCPARFCLNCSLPGHCSKECLERASWNKHCNRCDMKGHYADACPEIWRQYHLTTKPG
PIKMASSHSEPSALVYCYNCSREGHFGYACSERRMHGSIFPSSPFIYYYDDEYDIEKRAH
RLKRKASELQEAGLLPVRLESPWKREKHVEHSHKKKKKPWKEHSKQKTKSSRTDKHRAKK
HRNEAERGHGMEEDFPRGYKKHASKAGKKCHKSDFQAHGSKTEYVQKILEAAERKKKMKK
RKDSSPSIDESLFLIKQRKKKSK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatggatatgaagacatagaggatactgaagtgtatgaagatgaactttatcat
gaggaatcatccagtgagcagagtattgatagtgaggtagaatttcatctttacagccag
atccactattcccaagatcttggagaaatcagtagcctagaaataaacaaagaagctgat
gttacagaagtcagtggccagagttcagttttgactgagaaattgtatcaggacaagaac
gttgttgaactgcctgatcatgatgtcattcagattccagatgaccgtgagatcatcgtc
ttgtccgatacaccggatgaagacagtgtttacaaaagcaaagcaaagaagtcagcaaac
tctgtaaattcagagaaaaaatgtgtccatccaggaatttccacaccaaatcgttccaaa
gttgctgagtctaatgctctggatggtgctgaatcagtcacaaaagtttcaaggcaaagg
aaaaggactagtgggaagcttagctctgttacttccactagaacattgcaggaggtgatg
gtaatagatgatagctcaaatacggaggaggagagcttgatatctgaaagtgataatgtg
gagagttggatgcttttggaatgcagtacggatgacaaagatgaagatatccttttgaac
cttgaaggctgtggaacttctgttggtgaaggagaagctgctgtggactggtccatcagt
aataaagatgcggaggcacaaatatgtaactatgcacctacgaggcgtacgagtgtccga
tactacacagctgataaaaatgttacctgtagaaattgcggtaaaacgggtcatttgtcc
aaaaactgtcctattccaaggaaaattcccccttgttgtttgtgtgcggaaagaggccac
ctacaaaacacttgcccagcgcggttttgtttgaactgcagtttgcctggacactgctct
aaggagtgtcttgagagagcctcttggaataagcactgtaaccgctgtgatatgaaaggg
cactatgctgatgcttgcccagaaatatggaggcagtatcacctaacaacaaaaccagga
ccaataaagatggccagttctcactccgagccctctgctctggtgtactgctacaactgt
tcccgggaaggacattttggatatgcgtgttcagagaggcggatgcatgggagtattttc
cctagttccccatttatctactactatgatgatgaatatgacatcgagaagagagctcac
agactaaaaaggaaggcttcagaactgcaagaggctggccttttgcccgtgcgtctggag
agcccatggaagagagaaaagcacgtggaacacagccataagaaaaagaaaaagccttgg
aaagagcatagtaaacaaaagactaagtcgtcccggacagacaaacacagagcaaagaag
cacagaaatgaggctgaaaggggccacgggatggaagaggactttcctagagggtataaa
aagcatgcatcaaaggctggcaaaaaatgtcacaagtcagatttccaggcacacggcagc
aagacagaatatgtccaaaagattttggaagcagctgaaaggaagaagaaaatgaaaaag
cggaaagacagtagtcccagtatcgatgagagtttatttcttattaaacagagaaaaaag
aaatctaaatag
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