Tinamus guttatus (white-throated tinamou): 104573489
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Entry
104573489 CDS
T08560
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03440
Homologous recombination
tgt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104573489 (TOP3B)
03460 Fanconi anemia pathway
104573489 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgt03032
]
104573489 (TOP3B)
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104573489 (TOP3B)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104573489 (TOP3B)
DNA replication proteins [BR:
tgt03032
]
Eukaryotic type
DNA Topoisomerases
104573489 (TOP3B)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104573489 (TOP3B)
FA (Fanconi anemia) pathway
104573489 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
DUF2204
SR1P
Motif
Other DBs
NCBI-GeneID:
104573489
NCBI-ProteinID:
XP_010218989
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFVGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKPRSTERTVYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKENSLTLDWDRVRVFDREVAQMFLNITKMEKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKALLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCIGKVVTSPGFTEIMPWHSIPLEESLPHCERGDVFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDSCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRPNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgctgatggtggcggagaagccctcgctggcccagtccatcgccaagatc
ctctcgcggggaaacatgtcctctcgcaaagggctgaatggtgcctgctctgtgcatgag
tacactggatcatttgttggacagagtgcccatttcaagatgacatctgtgtgtggccat
gtgatgactttggatttcataggaaaatacaacagctgggacaaagtggatccagcagaa
ctttttagtaaagcccctacagaaaagaaagaagcaaatcccaaactgaccatggtgaaa
tttttacaggtggagggaagaggctgtgattatattgttttgtggttggattgcgataaa
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgttatgaacaaacct
cgtagcactgaacgaaccgtgtacagagctaaattcagttctatcactgacacagacatc
tgcaatgctatgaatcacttgggagaacccaatcgcaatgaagctctctcggtggatgcc
cgccaggagctggatcttagaattggctgtgcgtttacaaggtttcagactaaatatttc
caggggaaatacggaaatctagacagctccctcatctcctttgggccatgtcagactccg
actcttggattctgtgttgaacgacatgacaaaatccagtcatttaagcctgagacttac
tgggtgctgcaagctaaagtgaacccggaaaaagaaaattctctcactttggattgggat
agagtgagggtgtttgatcgtgaggttgctcaaatgttcctaaatataacaaagatggaa
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaaacagagaccactggct
ctgaacacggtagaaatgctacgagtggccagtgctgctttaggaatgggtccccaacat
gccatgcagatagcagaacgtctctatactcagggttatattagctaccctcgaacagaa
actacccattatccagaaaactttgacttgaaaggatgcttgagacaacaagctaataat
ccttactgggcagaaactgtaaaagctttgctatcagaaggtattaatcggccaagaaag
ggccacgatgcaggtgaccatcctcccatcacacccatgagagctgcaacagaagcagaa
ttaggtggagatggatggcgactatatgagtatataactagacatttcattgccactgtc
agtgctgattgcaagtacctacaaacgaccatttcttttagtattggtcctgaacgtttt
acctgtattggaaaagtggtaacttcaccaggattcacagaaatcatgccttggcacagc
atcccattagaagagagcctcccgcattgtgagagaggagatgtctttccaattggtgaa
ataaaactgctggaaaagcaaaccagtccacctgattacctgactgaagcagaacttatc
actctgatggaaaagcatggcattggaactgacgcaagtattcctgtccacattaacaac
atttgccagcgaaactatgtcacagtggagagcggtcggagactaaagcctacaaacctt
ggcatcgttctggttcatggctattacaaaatagatgcagaattggttcttcctacaatc
cgcagcgctgtagagaagcaactcaacttaatagctctgggtaaagcaaattatcatcag
gtcctggagcatactcttgacatcttcaaaaggaaatttcactactttgtggattctatt
gcgggtatggatgagctgatggaagtgtctttttcacctttagctgccacaggcaagcct
ctttcccgctgtggcaaatgccatcggtttatgaagtatattcaggccaagccgagtcgc
ctgcattgctctcactgtgatgacacctacagtctcccacagaatggtaccattaagctc
tacaaagagttgcgttgtcccctggatgactttgagctggtgttgtggtcatctggatcc
agaggaaagagctacccactctgtccatactgttacaaccaccctcccttcagggacatg
aaaaaaggaatgggctgtaacgagtgcacccaccccacgtgccagcactccctgagcatg
cttggaatcgggcagtgcgtcgaatgcgagaacggggtcctggtgctggactccacgtcg
gggcccaagtggaagatggcctgcaacaagtgcaacgtgatcgtgcacttcttcgagaac
gcccacaaagtccgcgtgtcacccgagacctgcgactcgtgcgatgcagccctcgtggac
gtagatttcaacaaggccaagtctcccctgcccggggacgagacccagcattcgggctgc
gtcttctgtgaccctgtgtttcaagatctggtggagctgaagcacgcagccatgaggcac
cccatgcaccgcgggggacaggggaaaaggcaaggccggggccgggggaaaggccgcagg
cctggaggaagacccaatccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtataa
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