Tinamus guttatus (white-throated tinamou): 104573999
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Entry
104573999 CDS
T08560
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgt04121
]
104573999 (PDZRN4)
Enzymes [BR:
tgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104573999 (PDZRN4)
Ubiquitin system [BR:
tgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104573999 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
104573999
NCBI-ProteinID:
XP_010219542
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPVSK
AHGSAQDVQLVDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
EGNEYLSSLPADADRAEDFEYEEVELCRIGSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAARDGRIREGDRILQINGQDVQNREEAVALLSSDECKKIVLLVARPEMQLEEGWLDDER
NEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTD
ESLRNDESSEQENAPEEQNSATLQSKRELGQSQDTLGSVELQCNESFASGEYIESDFIGN
PDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNRREQDGVEHELQLLNEELRNIELE
CQSIMQAHRLQKVRDQYGDIWALHDEGFRNYNTSVDVQRGKLDDIMEHPEKSDKDSSSAY
NTAESCRSTPLTVERSPDNSLQRMISITNRKNLRSTIAANQLSSGQSSREATSSKTKVTE
QNNPAEDTVLASESGKFTDQEKQSSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQ
KSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGS
EGKKEINIIELSHKKMMKRRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcacttttcagaagagagaggaacactacaaactgctctatgaa
gtttcacaggtcaacgggaaggatctctccaaggccactcacgaagaggctgtggaagct
ttccgtaatgctaaggagccaattgtagttcaggttttacgacgagcccccgtcagcaaa
gctcatggtagcgctcaggatgttcagcttgtggatgctagcactcagactgacatcacg
ttcgagcacattatggccctggcaaaattaaggccttccacacctccagtacctgatatc
tgcccatttctactttcagacagctgccattctcttcacccagtggagcatgaattttat
gaaggtaatgaatatctttccagcctgcctgctgatgcagatagagcagaggactttgag
tatgaggaggtggagctgtgccgcattggcagccaagagaagctggggctgacggtctgt
tacagaacagatgatgaggaagacacggggatctatgtcagcgaggttgatccaaacagc
attgctgccagagacggccggatccgtgaaggagatcgcattttgcaaataaatggccaa
gatgtccagaatcgggaagaggcagtggcattgctctccagcgacgaatgcaagaaaatt
gtgttgctggtcgcgagaccagagatgcagctggaggaagggtggctggatgatgaaagg
aatgaattcttagaggagttaaacttagagatgttggaagagcagcataatgaagcgatg
cagtacacagccaatgaggtggagcagccaaagaagcatgaagaagaagatggcactaca
gacactgcaacctcatcatccaataaccatgagaaggacagtggggtgggacctacagat
gaaagtctgcgtaatgatgagagctcagagcaagaaaatgcacctgaggagcagaacagt
gccaccctgcagagcaaacgggagctgggtcagagccaagacacattaggaagtgttgaa
ctccagtgcaatgaaagctttgcatctggagaatacattgaatctgatttcataggaaac
ccagatgaggaatgtgaaaggtttcggcagctcttggaactgaagtgcaagattcgaaac
catggggagtatgatctgtattactcgagcagcacgatagagtgcaacagaagggagcaa
gatggggtagagcatgagctgcagctactcaatgaggagctgaggaatattgaactcgaa
tgtcagagtattatgcaagctcaccggcttcaaaaggtgagggatcaatatggagacatt
tgggctttgcatgatgaagggttcaggaactataacaccagtgtcgatgtacaaagaggc
aaactggatgatataatggagcaccccgagaagtctgacaaggacagctccagcgcgtac
aacacagccgaaagctgcaggagcactccactgaccgtagagcgctccccagataactcc
ctccagaggatgataagcatcaccaacaggaaaaacctgaggagcaccattgcggctaac
cagttgtcctcaggacaaagcagcagggaggcaacctcatccaaaaccaaagtcactgaa
caaaacaatcctgctgaggacacagtgctggcttcagagagtggaaaatttacagaccaa
gaaaagcagagcagtgagcacattccctacctgtctccgtatcacagctcttcttacagg
tatgggaatatcccagctcatgcaaagcattatcaaagttatatgcaactgatccagcag
aaatctgctgtagagtatgcccaaagccagctcagcctggtgagcatgtgcaaagactcg
cagaagtgtgcagagcccaagatggaatggaaagtgaaaataaggagtgatgggacaagg
tatatcacaaagagaccagttcgagacagaatcctgaaggaacgtgccttaaaaattaaa
gaggagcgcagcgggatgacgacagatgatgatacgatgagtgaaatgaagatgggtcgt
tactggagcaaagaagagaggaagcagcatttggtgagagctaaggagcagaggaggcgg
cgggagttcatgatgcggagcaggctggagtgtcttaaggaaagtccacagagtggcagt
gagggcaaaaaggaaattaacattattgaactgagtcacaaaaagatgatgaagaggaga
aacaagaaaatcttggacaactggatgacaatacaagaactgatgacacacggtgctaaa
tctccagatggcacaagagtgcacaatgcctttctgtcagttactactgtatga
DBGET
integrated database retrieval system
