KEGG   Tinamus guttatus (white-throated tinamou): 104575138
Entry
104575138         CDS       T08560                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tgt  Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:tgt00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tgt01009]
    104575138 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tgt03036]
    104575138 (KDM5B)
Enzymes [BR:tgt01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104575138 (KDM5B)
Protein phosphatases and associated proteins [BR:tgt01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104575138 (KDM5B)
Chromosome and associated proteins [BR:tgt03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104575138 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_Pygo PHD_UBR7-like PHD_2 PHDvar_NSD PHD_JHD1
Other DBs
NCBI-GeneID: 104575138
NCBI-ProteinID: XP_010220768
LinkDB
Position
Unknown
AA seq 1501 aa
MATILERETQWEEEQAFIDIVILRAGDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLN
FLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGGFDVVCKERKWTKIATRMGFA
PGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPS
ETCPPARRAKRLRAESTNIKTESEPPEVRTHNLRRRMGCAPPKCENEKEIHSTVKLPEKR
EHAGEPEKDKSKARSKKPTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHD
VPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTEL
VEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMP
VMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGY
AAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRA
YHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDV
VVASTVQKDMAIMIEDEKMLRERVHKLGVTDSEQVAFELFPDDERQCLKCKTTCFMSAVY
CSCKPGLLVCLHHVEDLCSCPTYKYKLGYRYNLEDLYPMMNALKLRAESYNEWASNVNEA
LEAKINNKRSLVSFKALIEESEIKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTR
YRSGGGKSQNQLSVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQHSHKLLSEEMP
SAAELQELLDVSFDFDVDLPQLADLRTRLEQARWLEDVQLASADQNSLTLDDMRRLIDSG
VGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLAAAVREIEEIPAYLP
NGAALKDAVQKAKDWLQEVEGLQAGGRVPVLDTLVELVTRGRAIPVHLDYLPRLESLVSE
VKAWKECAANTFLYENCPYSLLEVLCPRCDIGMLNLKRKQKKLKEPVPSGKKKSTKLETL
SDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEVKVLSNEEDAEMKVCLCQKEP
AAPMIQCELCRGFFHTSCVSVPSTLQGPRVWLCPHCHRSEKPPLEKILPLLASLQRIRVR
LPEGDALRYMIERTVNWQHRAQQMLYSGNLKLIQDKVGSGLLYNRWQATASQLPETNKVS
QTIGAMSFSMPWDWDNRTIYLHSSFSTGQHCIPLHVISTELDELMMEAQLLQVSLPEIQE
LYEILFTKQSPASQTEQRSSAGPANEKNDCCRGKKDGISYMERKLKRRFERESFCDEKRS
RVKQMRTPKKKKLKLNHSKDLCNNRLERERERLLEVQRSSESHLFPSDASFSEQEDSEDE
DAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICISCTGKDSQYR
K
NT seq 4506 nt   +upstreamnt  +downstreamnt
atggccaccattttagaacgcgagacacagtgggaagaggaacaagccttcatcgacatc
gtcatcctccgggctggggactggcagcctccatttgcctgtgatgtcgataagcttcac
ttcactccaaggatccagagactcaatgaactagaggctcagacccgtgtaaaactgaat
ttcctggaccagattgcaaagttttgggaacttcagggatgcacactgaaaattccacac
gtggagaggaagatcttggatttgtttcagcttaatagactagttgcagaagaaggagga
tttgatgtagtttgcaaagagagaaaatggaccaagatagccaccagaatgggatttgct
cctggcaaagcagtgggttcccacatccgtgcacattacgaacgtattctctacccttac
aacttattccagtctggagctagcttactgtgtttgcagaagccagacctcaccagtgac
acaaaggacaaggagtataagccccatgatattccacagagacagtcggtgcagccatct
gaaacttgtccacctgctcgtcgagcaaaacgcctgagagcagagtccactaatatcaaa
acagaatctgaacctcctgaagtccgaactcataatctaagacgtcgaatgggatgtgca
cctccaaagtgtgaaaatgaaaaggaaattcatagcacagtgaaacttcctgagaagaga
gaacacgctggggagccagagaaagacaaatccaaagctcgatctaaaaaacccactaat
gctgtggatttgtatgtctgtctcctgtgcggcagcggcaatgacgaggaccgtctcctg
ttgtgtgatggctgtgatgacagttaccatactttttgtttaattccaccccttcatgat
gttccaaaaggggactggagatgtccccagtgtctggctcaggagtgtaataaacctcaa
gaagcatttggttttgaacaagcagcaagagactacacgcttcgcacgtttggagagatg
gcagatgcgttcaagtcggactatttcaacatgccagtacacatggtccccacagaattg
gttgagaaagaattttggcgacttgttagtactattgaagaggatgtcacagtggaatat
ggagctgatattgcttcaaaagagtttggcagtggctttccagttagagatgggaaattc
aaagttagaccggaagaagaggagtacctggatagtggctggaatttgaacaacatgcct
gtaatggagcagtctgttcttgctcacatcactgcagacatatgtgggatgaaattaccc
tggctatatgtaggaatgtgcttttcttcattttgttggcatattgaagaccactggagc
tattcaataaactacctgcattggggggagcctaaaacgtggtatggagccccagggtat
gcagctgaacagctggaggatgtaatgaagaagcttgctccagagctatttgaatctcag
ccagatctcttgcaccaacttgtcaccataatgaacccgaatactttgatggcccacgga
gtacctgtttatcgaaccaatcagtgtgccggagaatttgtcatcacttttccaagagct
tatcacagtggtttcaatcagggtttcaattttgctgaagctgtgaacttctgcacagtt
gactggttacccttgggtcgccagtgtgtggaacattatcgcctgctgcaccgttactgc
gtgttttctcacgatgagatgatttgtaaaatggcttccaaagccgatgtcctcgatgtt
gtggtagcatctactgttcagaaagacatggcaattatgattgaagatgagaagatgttg
cgtgagagggttcataagctgggagtgactgactcggagcaagtggcttttgagttgttt
cctgatgatgagcgacagtgtttaaagtgtaaaaccacttgtttcatgtctgctgtttat
tgctcatgtaaacctgggttactcgtatgcctgcatcatgtagaagatctctgttcctgt
cccacctacaaatataagttgggataccgatataacctggaggatctgtatccaatgatg
aatgcgctgaagctacgagcagaatcatacaatgaatgggcttccaatgttaatgaagct
ttggaggcaaaaattaacaataaaagaagtctcgtcagttttaaggctttgatagaagaa
tcagaaattaaaaagtttccggacaatgatctactgcgacacctcagactagttacacag
gatgcagacaaatgtgcttcagtggcacagcagcttcttaatggcaaaagacaaaccagg
taccgctctggaggaggaaaatctcagaatcagctgtctgtgaatgagctgcggttgttc
gtaaggcagctctatgctctgccctgtgtcctcagtcagacacctttactgaaggatctt
cttgatcgtgtggaagcttttcagcaacatagccacaaactcctctctgaagaaatgcct
agcgctgcagaactccaggagctgttagatgtcagctttgactttgacgtggatcttccc
caactcgctgacctgcggacacgtctggaacaggcacgctggctagaggacgtgcagctg
gcttcggcagaccaaaactctcttactctagatgatatgagacgtcttatagattcaggt
gttggattggctccttatccagcagttgagaaagcaatggctaaactacaggaactcctt
accgtatctgaacactgggatgacaaagccagaaatctgataaaggccagaccacggcag
tcactgagcagtctcgcagcagcggtgagagagatagaggagattccagcctatctccca
aatggtgccgcactcaaggatgcagtgcagaaggccaaagattggttgcaagaagtggag
ggattacaggctggaggacgtgtacctgttctagacacactcgtggagcttgtcacaaga
ggtcgagctattccggtgcacctggactacctaccaaggcttgaatccttggtgtcagaa
gttaaagcgtggaaggaatgtgcagctaacacgtttctgtatgagaactgcccctactct
cttctggaggtgttatgtccccgatgtgatattggaatgttgaatcttaaaagaaagcag
aagaaattaaaggagccagtgccaagtggaaagaagaaaagcaccaagctagagactctg
agcgacctggaaagagcgctctccgagagcaaagacactgcctcggcgatggctacgctt
ggggaagcccgattaaaggagatggaagcactgcgttctctgcgagcagcaaatgaagta
aaggtgctgtctaacgaagaggacgcagaaatgaaagtctgtctatgccagaaagagccg
gctgctccaatgatccagtgtgagctctgcagagggttcttccataccagctgtgtttca
gtgcccagcactttgcagggacctcgtgtgtggctctgtccacactgtcatcgatcagaa
aagccacctttagaaaaaatcctccccttgctggcgtccttgcagcgtattcgcgtacgg
cttcccgagggggatgctttacgctatatgatagagaggactgtgaactggcagcacaga
gcacaacaaatgttatattcagggaatctaaaactcatacaagacaaagttggctcagga
ttactgtacaacagatggcaagccacagcaagccaattgccagagacaaataaggtttcc
cagacaattggagctatgtcattctccatgccttgggactgggataacaggaccatatat
ttacattcttcattttctacaggacaacactgcatcccccttcatgtcattagcacagag
ctggacgagttgatgatggaagcccagctgctacaggtttctctgcccgaaatacaggag
ctgtacgagatcctattcacaaagcaaagtcctgcttcccaaacggagcagaggtcctca
gctggcccagcaaatgaaaagaatgattgctgccgagggaaaaaggatggaatcagttat
atggagagaaaactgaaaaggcgttttgaaagagagagcttttgcgatgagaagagatca
agggtaaaacaaatgagaacaccaaaaaagaagaaactgaaactgaatcattcaaaggat
ctctgcaataacagactggagagagagcgggagcgtctcttggaggtgcagcgctccagt
gagagccacttgtttccctcagatgcatcattctctgagcaggaggactctgaggatgaa
gatgccatctgccctgctgtgaactgtctgcagcctgagggagatgaggtggattgggtc
cagtgcgatggcagctgcaaccagtggttccaccaggtgtgtgtgggcatctctccggag
atggcagagaaggaagactacatctgcatcagctgcacggggaaggactctcagtatcgg
aagtaa

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