Tinamus guttatus (white-throated tinamou): 104575241
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Entry
104575241 CDS
T08560
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03440
Homologous recombination
tgt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104575241 (BRIP1)
03460 Fanconi anemia pathway
104575241 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104575241 (BRIP1)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104575241 (BRIP1)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104575241 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
104575241 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
DUF1262
Motif
Other DBs
NCBI-GeneID:
104575241
NCBI-ProteinID:
XP_010220881
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MPSDVSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKLLVKSSSDKEDRKPETSLPCRCTCHSQSQSKEAAANVNHGASCSFNGYEA
GSSIKTETPLTNTEHNETETLASKLSAKKRASVCDSENDDFQVDRKRIRSLETEQQVRKR
HCFAKGVQLVDALEVYHQRKNGELVVHAEKGGKSPVFSPKTSSDPCSQCSCSSGKETEKD
ASKAKKKENGDQTSIPKIFFGTRTHKQISQITRELKRTAYSGVPMTILSSRDYTCIHPVV
SSSASNRNEMCVELLEGKQGKSCLYYHGVHKLSEYHTLQLAHQKCQAWDIEDLVSLGKKL
RACPYFAARELMLGADIVFCPYNYLLDPQIRESMDINLKGQVVILDEAHNIEDSARESVS
YSVTENQLRSAREELDLMVNNNIRQKDHEPLRAVCCSLANWLQESSGQLVERGYETSCKV
WSGREMLTFFHNMGITNITFPVLQKHFAAVLEKEEKVMMFGKEEVIEIPVVSPATQIMLK
GLFMILLYLFKDNSRYADDYRVALQQTYAWISENQSDVSDTNGFFARTKHKRNSRQKALV
HMLNFWCLNPAVAFSDLTDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
VGTIGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCHTIGQGILCFLPSYKMLDKLRDR
WMHTGLWRNLEQVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGGKEGALLIAVCRGKVSE
GLDFCDDNARAVITIGIPFPNVKDLQVELKRKYNDQHKNKRGLLAGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRINPNKYITGLSKWIRQQIKHHENFGSALESLDTFARK
NQTGVGGSSQCNSEFLHVPSSSKDLSPPSSLEASIHLSPDVPAENEKQSGQKVDAEGHSR
CATQREKHMDSTPKRLATETEREKKNTRTNADFMKEHCCLKPLTSTPLSAAENYTSIAKG
KHKKNVNKTSELIDSVNQCQSAFITEHKPSAPASCLGTRNFFLKNTEAAVAEEGDLGEPQ
LCDGEVEPHSELISKGGKSELVKLNVSAEDEDEDESIYYTPELYDDVEPEEQKISPLVPA
SNKAENWIEQEKRTDFFETNTSKTLSIVKETINDGDIKASLRGIKQNDGSKNSAVNNVVD
VTSGVEAEQIESQEVDNKKMKISLSRSRNKGVSSFLLSNTST
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatgtgtcagaatatactattgggggagtgaagattatattcccttgcaaa
gcttacccatcacaactagctatgatgaatgctattgttaaggggctaaataacaggcaa
cactgtttgttggagagccccacaggaagtggcaaaagtttggcattactttgttctgca
ctgtcgtggcagcaatctttgtatgaaaagttgctggttaaatcatccagtgacaaggaa
gacagaaagccagagacttcgttgccatgtcgctgtacatgtcattcccaatctcagagc
aaagaggctgcagcaaatgtgaatcatggtgcttcttgttcttttaatggttatgaagca
ggaagttccataaaaactgaaaccccattaacaaacacagaacataatgaaactgaaacc
ctagcttcaaaattgtctgctaaaaaaagagcatccgtgtgtgacagtgaaaatgatgat
tttcaagtagacaggaaaaggattcgctctttagaaactgagcagcaggttagaaaacgt
cattgttttgcaaaaggagtgcagttagttgatgctttagaagtttatcatcagagaaag
aatggggagctggttgttcatgctgaaaaaggtgggaaaagccctgttttttctcctaaa
acatcttctgacccatgcagtcagtgttcctgttcttctggaaaagaaactgaaaaagat
gctagtaaggcaaagaagaaagaaaacggggatcagacatccatccccaaaatatttttt
ggcacacgaacacacaagcaaatatcccagattaccagagagttgaagagaacagcgtat
tccggtgtccctatgacaattctttctagccgggattatacctgtattcatccagtggta
tctagtagtgctagtaataggaatgaaatgtgtgtagagctgctggaaggaaaacagggc
aagtcttgtctttattatcatggtgttcataaactcagtgagtatcatacgctacagttg
gcacatcagaaatgtcaagcgtgggacattgaagatcttgtgagcctgggcaagaagctt
cgtgcctgtccctattttgcggccagggagctcatgctgggggcagatattgtattttgt
ccttacaattatctcctagacccacagatacgagagagcatggatattaacctaaaaggc
caagtagtcattttagatgaagcccataatattgaggactctgctcgggagtcagtgagc
tacagtgtgacagaaaatcagctaagatctgctcgagaggagctggatctcatggtgaat
aacaacatcaggcagaaggatcatgagcccctacgggctgtgtgctgctccctggcaaac
tggttacaggagagctcaggtcagctagtagaaagagggtatgaaacttcttgtaaagtt
tggagcggaagagaaatgctcacctttttccacaacatgggaataacgaatattaccttt
cccgttctacagaaacattttgctgctgtcctggaaaaggaagaaaaagtaatgatgttt
ggtaaagaagaagttattgagataccagttgtgagccctgctactcaaattatgctaaaa
gggttattcatgattcttttatatctttttaaagataatagcaggtatgcagatgactac
agagttgctttgcagcaaacttacgcttggatcagcgaaaaccagtctgatgtttcagac
acaaatggcttctttgcaaggaccaaacataaaaggaattcacggcagaaagctttagtc
cacatgcttaacttttggtgcttgaatccagctgtggctttttcagacttaactgatgtt
agaacaattgttctgacatctggtacgctctctccaatggattcgttttcttcagaactc
ggtgtcaagttttctattcagcttgaggcaaatcatgtcattcggaactcgcaggtttgg
gttggcaccattggagcaggccctaatggtcggaagctctgtgctacattccagcataca
gagacctttgaattccaggatgaagtgggagcacttctgctttcggtgtgtcatacaata
ggccaaggaattttgtgttttttgccatcttataagatgttggacaaattaagagatcgt
tggatgcataccggcttgtggagaaacctggagcaggtcaagacagtcattgcagaacct
caaggaggagcaaagagcgactttgatgaactgcttaaaatatactatgatgcaataaaa
tgtaaaggaggaaaagagggagcactcctgatagctgtgtgcagaggaaaagtgagtgaa
ggcttggatttctgcgatgacaacgcccgggcagttataaccataggtattccgtttcca
aacgtgaaagacctgcaggttgaattaaagaggaagtacaatgaccagcacaaaaataag
agagggcttttagcagggagtcagtggtatgaaattcaagcttatagagctctcaaccaa
gccctgggaaggtgtataaggcacaggaacgattggggtgctcttattttagttgatgac
cgctttcggattaaccctaataaatacataactgggttatctaagtggattcggcagcaa
attaagcaccatgaaaattttggtagtgcacttgaatctttggatacatttgctagaaaa
aatcaaacaggcgttggtggttcctcacagtgcaacagtgaatttctgcacgtaccttcc
agctcaaaagacctgtcaccaccttcttcgctggaggcttctattcatctatcaccagat
gtccctgctgaaaatgagaagcaaagtggccagaaagttgatgcagagggtcattctcgc
tgtgcaacacaaagagaaaaacatatggactccacacccaaaaggcttgccactgaaaca
gagagagaaaaaaagaacactcggactaatgctgattttatgaaagagcattgctgcctt
aaaccattgacttcaacacctttgtctgcagctgagaactacacgtccatagctaaaggc
aagcacaagaagaatgtgaacaagactagtgaacttattgatagtgtaaatcaatgccag
tcagcattcattacagaacataaaccaagtgcaccagcatcgtgtttgggaacaaggaat
tttttccttaaaaatactgaggctgcagttgctgaagagggggaccttggggagccacaa
ctttgtgatggggaagttgagccccatagtgaacttatttcaaaagggggcaaatctgaa
cttgttaagttaaatgtatctgcagaagatgaggatgaggatgagagtatctactataca
ccagaactctacgatgatgtagaaccagaggaacagaaaatcagtccgctagttccagcc
agtaataaagctgagaattggattgaacaagaaaaacgcaccgatttttttgaaaccaac
acctcaaaaacactaagtatcgttaaagaaacaattaatgatggtgacataaaggcaagt
ttacgtggaataaagcaaaatgatgggagtaagaatagcgcagtgaataatgtggtagac
gtgactagtggagtagaagcagagcagatagaatctcaagaagtggacaacaaaaaaatg
aaaatcagtctttccagatcacgaaataaaggtgtgtcatctttcctattgagcaatact
agcacgtag
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integrated database retrieval system
