Tinamus guttatus (white-throated tinamou): 104575281
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Entry
104575281 CDS
T08560
Symbol
NLRC5
Name
(RefSeq) protein NLRC5
KO
K22615
NLR family CARD domain containing 5
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tgt04054
]
104575281 (NLRC5)
Pattern recognition receptors [BR:
tgt04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104575281 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
NPHP3_N
AAA
NOD2_WH
AAA_16
AAA_22
LRR_NXF1-5
NB-ARC
AAA_25
bpMoxR
nSTAND3
Mg_chelatase
ATPase_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
104575281
NCBI-ProteinID:
XP_010220920
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
FGRRRRHSSSSTSDKDAKQQRLDSAERYRHLLINSVRQRYGSRRAARPASRGQMQPPTFN
QAFVNLVIRSKASRLKEKTDKPREDVAATPEPEECVDTAVKVSDLFNSVAPSGATKVIFL
FGKPGTGKTMLMHRIYQKWAEGVLHQFLLTFLFEFRQLNLLKRKLTLKELLFDLFLQPED
SPDAVFQHLLENAQRTLIIFDGLDEFAGNMDVPSSSQGCPALLSPMSISELFADLCHGKL
LPGCTVLVTSRPQRLPDFLLNTVDLLAEIWGFDHEKVDEYVSHYFHQHSFKEQAIAHLKN
NTKLLSMCLIPALCYVVCICLEYLLLKHQMSVELPQTMTQFYIKMLLIFINKHQGEHAGS
EETQLNCNKKAILGLCDLALKGLEAKKLVFYVGDIPEHVKEFASLHGLLTVFEVKTSGGL
PEAGYAFVHLSLQEFFAALCLMVSKKVDKNYLKKKFSLKSKWTVKNEAKTEFVESFHIFL
SGLSSKECRTFLMLLAEQDEAWVQDKQDSILQSLKRLAATNLTGPKVIELCHCTFETQDL
EVAQHIGSLPNFKYEFKNFRLTPLDMSALVFVINSGQDLTRLDFAGCPMDIECLEILASC
KNVARLSFRSRRCGDDFAAALSRGLQKMGSLKKLELTGGIITAKGLSDLVQASSHCLQLE
EMNLQDNRIRDLEVKRVMDVFSRMEKLQKIDLSYNHLSLNVVLLLAKEIVACQNATELLV
RKDTVIIYFSGQSGKAPRSSDFRGEENKEHVTQTRHMKLCLQGLSLCPQHAEEIVAILQS
CPRLSEVDLSGNNLGDEGCSWLLKSLPWISILKQLDLSQNHLSIDGICSLVKSVNTCQKI
MEVEVSLWHNTAILRFTGYRESASPYSREEPVFSTSDQEDREENQTPTASKKIRLTDSRL
QVSDLEKLCAVLKECSSVSELDLSNTALGDKGLYQLFQLIPSLTMLRSLKLDRNEISLNS
VPFLAQSLSAREQIKTMNLSLGHTQEVHITFWERIGVRSVSRSRRCFLTHPKPGTNSQCF
CLRDCAMAPEDVSRLCQILSACTQLTQIDLSGNSLNEQCIKRLLTFLPRLHHLILLSIRN
NNFSPHCIILLANSINLCERIRKVEVRARKNAFLHFGTSMENKKTSCRLIDCAIGEEQLD
ELCSVLEQHGWLAEINLSRNQLGDEGLRRLLDHLHQASVTCSLNLSHNRVSQDGVLDLIN
TFSTSGNTTEIQVSLCSKATLIIKLTTRNDPRKVLRLTECSFQPEHLEKLCSVLGKCSGL
TEYVSSKNNVTVQIAEVLLHSLKKNLGPLKISIEEPWVSEESVKSLLELALQACGNITEI
TICKDKTLFQLCVGFPPCMEKMESVVSRLNLHELDVGRACFYQRLREKCAQLQELRWSHV
ELQGDEAEMLVSVLLPLPALKKFALTSSRIVPTGVDYLIAGLQNCQAIEELNLGHMSLSD
ATVPKLVLGLGEMPSLKRLLLNHNSIGDDACPSLADALRKMHCLEEIDLSHNKIGDPGLI
NIAAVLLEMPNLKRINLSGNIPSPVGGEKLMDALACCKRIEELLLSRNHFGDTTAMKLAL
CLPCMNDLKILHLQNTNIGPSGSTELAGALVGCQRLEELSLSENCLGEGGVHALSKGLPC
FKNLRKIDMKLCGITDVASKLLSRAFRQCPSMEEIILSWNTLGDRGAQELASALPRMEKL
KTLDLEKNIIGADGATKLAEELAKCPEIQLIRLWKNPVPQDLAENLTFQDSRLCFSPC
NT seq
5219 nt
NT seq
+upstream
nt +downstream
nt
ggtttggtcgccgccgccgccacagcagcagctctacgagtgataaagatgctaaacagc
agcgactggactcagctgaaaggtaccgacatctcctcatcaactcagtccgccaacgct
atggcagtagaagagcagccagaccagcgtcacggggacaaatgcagcccccgacattca
accaagccttcgtcaacctggttattcggagcaaagcgtctcgattaaaagagaaaacag
ataagccccgggaggatgtggcagctactccagaaccagaggaatgtgtggatacagctg
tgaaagtgtcagatctgtttaacagtgttgctccgtcgggtgccacaaaagtgatctttc
tgtttggcaaaccaggtacaggcaaaaccatgctaatgcacaggatctatcagaaatggg
cagaaggtgtcttgcatcagtttctcctcactttcctgtttgagtttcggcagctgaatt
tattgaaaagaaaattgactctgaaggaacttttgttcgacttgtttcttcagccagaag
acagccctgatgcagtgttccagcacctcttggaaaatgcccagcgtacactgatcattt
ttgatgggctggatgagtttgcaggtaacatggacgtgccatcctcttctcagggatgcc
cggcccttctgtcccctatgtctatatctgagctctttgcagacctctgtcacggaaaac
tcctacctggttgcacggtgttggtcaccagccgacctcagagactacctgacttcttac
taaacacagttgatttgctagcagaaatttggggatttgaccatgagaaagttgatgaat
atgtcagccactattttcatcagcattctttcaaagaacaagcgattgctcacctgaaga
acaacacaaagctcctcagcatgtgcctgatccctgctctatgttacgttgtctgcatct
gtctggaatatttgctccttaaacatcagatgagtgtggagcttcctcagactatgacac
aattttatatcaaaatgcttctcatcttcataaacaaacatcagggagagcatgcaggca
gtgaggagactcagctgaactgcaacaagaaggccattttgggtctgtgtgatcttgcct
tgaaaggcctggaagccaagaagcttgtattttatgtcggagatattccggagcacgtga
aggaatttgcttcattgcatggactgctgactgtctttgaggtgaagacaagtggtggcc
tcccagaggctggctatgcctttgtgcacttgagcttgcaggagttttttgcagcactat
gtctcatggtaagtaagaaagtagacaagaactacctgaagaagaagttctctttgaaat
caaagtggactgtaaagaacgaagccaagaccgagttcgtggagagttttcacatctttc
tctcaggcctgtcttccaaagagtgtaggacattcctcatgttgctggctgaacaagacg
aagcctgggtacaggataagcaggattccatcctgcagtcgctcaagaggctggcagcca
cgaacctgacagggcctaaggtcattgagctctgtcactgcacgtttgaaacgcaggacc
tggaagtggcgcagcacattgggagcctgccgaatttcaagtacgagtttaagaatttta
gactgacgcccctggacatgtcagctttggtttttgtcataaactcaggccaggatttga
ctcgcctggattttgcaggatgtcccatggacattgagtgtttggagattctggccagct
gtaaaaatgtggcacgcttgagctttcggagtagaagatgtggtgatgactttgctgctg
ctctttccaggggccttcagaaaatggggagcctgaagaagctcgagctgacgggtggga
tcatcacagccaaggggttatctgacctggtccaggcttcctcacattgcctccagctgg
aggaaatgaacttgcaggacaatcggatacgggacctggaggtgaagagggtgatggatg
tgttttccagaatggaaaagctacagaaaatagatttgagctacaaccatctttccttga
acgttgttctgctcttggcgaaggaaattgttgcctgtcaaaatgctactgagctgcttg
tcaggaaggacaccgtgataatatatttttccggccaatccgggaaagccccaagatctt
cggatttcagaggggaagagaataaagaacatgtgactcaaactaggcacatgaagttat
gcctgcaggggctcagcctgtgtcctcaacatgcagaggagattgttgccattcttcaga
gctgtccccgtctctcagaagtggacttatcaggtaacaaccttggagatgaaggctgca
gttggctgttgaaaagcctcccttggatatcaattttgaagcagttggatctcagtcaaa
accacctttccattgatggcatctgcagtttggtgaagtcagtaaatacctgccagaaga
taatggaggttgaagtcagcctgtggcataacactgcaatcttgaggtttacagggtaca
gagaatctgcttctccttattccagggaagaaccagtgttctctaccagtgaccaagaag
atagagaagaaaaccagacacctactgcttcaaaaaaaataagactgaccgacagtcgtc
ttcaagtcagtgacctggagaagctgtgtgcagtcctaaaggaatgtagcagtgtctcag
agctggacctatcaaatactgctctgggagacaaaggcctctatcagctgtttcaactca
tcccgagtctgacaatgttacgttcgctcaagctggatcgcaatgagatctccctgaact
cggtgccttttttagctcagtccttgtctgcacgggaacagattaaaactatgaacctca
gcttaggacacacacaggaggttcacataaccttttgggaaagaatcggggtcagaagtg
tcagcagatccagaagatgtttcctgacgcatcccaagcctggaacaaacagccagtgct
tttgtctcagggactgcgcgatggctcctgaggatgtgagcaggctctgccagatcctgt
ctgcctgcacccagctcacacaaattgacctgtctgggaattctttgaatgagcaatgca
ttaagagattactgaccttcctgcctcgtctccatcatctgatactgctgagtattagga
acaataacttttctccacactgcatcatcttactggccaactccatcaacctctgtgagc
ggatcagaaaggtagaagtgagggcaaggaaaaatgctttcctgcattttggaacaagca
tggaaaacaaaaagacatcctgcagactgattgactgtgccattggtgaagagcagctag
atgagctctgcagtgtcctggagcagcatgggtggctggcagaaataaatctttccagaa
atcagctgggagatgaaggcctgaggcgtctcttggaccacttgcatcaggcatccgtta
cctgttccctcaacctcagccataacagggtttctcaggatggagttctggatctcataa
ataccttttccacatctggaaataccactgaaattcaagtcagtttgtgctccaaagcga
ctttaatcatcaagctgacaaccagaaatgatccaagaaaggttttgagactcacagagt
gcagctttcagccagagcacctggaaaagctgtgctcggtcctgggaaagtgctccggtc
tgacagaatacgtatcctcaaagaacaatgtgacagtccaaattgcagaggttcttttgc
attctctgaagaaaaacctgggtcctctgaaaatcagcatagaagagccatgggtaagtg
aagaaagtgtcaagagtcttcttgagctggctctccaggcctgtgggaacattaccgaga
tcacgatatgtaaagataaaaccctcttccagttatgcgtgggcttcccaccctgcatgg
agaagatggagtcagtcgttagcagactcaacctgcacgagctggacgttgggcgcgctt
gtttctatcaaaggcttcgtgaaaaatgtgcccagcttcaggaactgagatggtctcacg
tcgagctccagggtgacgaggcagaaatgctagtcagtgttctgctgcctcttccagcgt
tgaagaagtttgcactcacctctagtaggattgtgcccacgggagttgattacttgattg
ccggcttgcagaactgccaggctatcgaagagcttaacctaggccacatgagcctcagcg
atgctactgttcctaagcttgtgctgggccttggtgaaatgccctctctgaaaagactgc
tcctgaaccataacagtattggtgatgacgcctgccccagtcttgcagatgccttgagga
aaatgcactgcttggaggaaatagatttaagccacaacaagattggagatccaggcctga
taaatatagctgctgtcctgctggaaatgccaaacctgaaaagaatcaacctctctggaa
acattcctagtcctgtcggtggagaaaagctcatggacgctcttgcctgttgcaagcgca
tcgaggagctgctgctatctaggaatcattttggtgacacgacagcaatgaaacttgccc
tctgtctgccttgcatgaatgacctgaagatcctgcatttgcagaacactaacattgggc
caagtggaagcacagagctggccggagccctggtgggatgccagcggctggaagagctca
gcttatcagaaaattgccttggggaaggaggtgtccatgccctgtccaagggtctgccat
gctttaaaaacctccgaaagattgacatgaaactctgtggcatcactgatgttgcttcta
aattgctttctcgtgccttcagacagtgcccttccatggaggagataatattgtcttgga
acacccttggtgacagaggagcccaggagttggccagtgctctcccaaggatggaaaaac
tgaagacgttagatctggagaagaatatcattggagcagatggggccacaaagctagcag
aggagcttgccaagtgcccagaaattcaactcataaggctgtggaaaaatccggtgcctc
aggacctcgctgagaatttgacattccaagactcaagattgtgtttctccccctgctag
DBGET
integrated database retrieval system
