Tinamus guttatus (white-throated tinamou): 104575533
Help
Entry
104575533 CDS
T08560
Symbol
COL5A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104575533 (COL5A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104575533 (COL5A3)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104575533 (COL5A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
104575533
NCBI-ProteinID:
XP_010221174
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
PNQGPAGRPGIPGAEGMRGPPGTTLMLPFQFGGDALKGPSVSFQEAQAQAILQQAKLSMK
GPPGPMGLTGRPGPLGLPGHPGLKGDAGDLGPQGPRGPPGLQGPPGKPGRRGSGDVGQPG
TPGPPGRRGPQGDSGGSRRRRLALHLEEIQGDPVDPLSSIGWIQGDPGGSGGRHLALHLE
EIQGDPADPLSSIEGDPGGSGGDTWLCTWRSRGIQRIRSALPRLLQGPDGLPGPRGQPGE
AGMRGPTGSSPGPPGPPGAGGIDGAPGPEGSAGPEGAPGPIGYPGPRGVKGAFGARGLKG
NKGEQGEDGFPGFKGDMGPKGDRGIHGEPGPPGQQGNPGTQGLPGPQGPVGLPGDKGHPG
REGPAGEKGLQGPEGAPGPIGYPGPRGVKGAFGARGLKGNKGEQGEDGFPGFKGDMGPKG
DRGDQGPLGSRGEDGPEGPKGQTGPVGDAGPLSSRLPXGKLGLPGLPGYPGRQGPKGSAG
FPGAVGLAGEKGKRGKAGQAGQTGQRGPPGLPGERGLPGATGAPGPKGHAGHDGAPGATG
EKGPQGPQGPNGFPGTKGPPGPAGKDGLPGHPGQRGEPGFHGKTGPPGSAGVVGPQGKSG
ETGAVGDRGHPGPPGPPGEQGLPGAAGREGAKGPAGLKGGEGPPGPPGPTGSPGERGPTG
AAGGIGMPGRGGAQGAPGPTGEKGAPGERGPMGPAGHDGIQGPVGLPGPGGPPGPSGEDG
DKGETGLPGQKGSKGDKGEAGLPGPSGIQGPPGHPGPAVSDHGMCSPLSQGSIPVWMQCL
DLDAYLDLDALSRSGCSIRIWMQYPDLDEVFGSGCSIQIWMQYPDVDAGSGYGCRIRIWM
WDRPERRDRVGRPEPAEQRWVQPLPGQPCHWMGRGDHPIPVSGEPGEAGDPGAPGEPGSS
GQDGAAGDKGDSGDPGLPGPPGAGGEPGPPGPPGRRGPVGLAGREGRQGEKGAKGQPGTE
GPPGKTGPTGAQGPPGRPGSEGLRGIPGPAGEQGLLGPPGQAGPPGPLGPVGLPGLKGDP
GNKGDKGHAGLIGLIGPPGEMGEKGDRGLPGAQGPPGPKGDPGPLGQKGSKGSPVSAGMQ
AVGASRREELGISGIGLAGHPPIPVACRARWVPEETPAPPAPRDPRPVRALHDGCQHRRG
QERTVLEVASSRVERLPLSDVAVSDFGDANQKFGFELGPVCFLG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
cccaaccagggtcccgcgggacggccgggaatcccaggagccgaggggatgcgcggcccc
cctgggaccaccttgatgctgccgttccagtttggcggggatgccctcaagggcccctct
gtctccttccaagaggcccaggctcaggccatcctgcagcaggccaagctctccatgaag
ggccccccaggccccatgggtctcaccggccgcccgggaccgctggggctcccgggacat
cccggcttgaaaggagatgctggagacctggggcctcagggcccccgggggccgcccggg
ctgcaggggccgccggggaagccgggacggcgggggagtggcgacgtggggcagccgggg
acgccggggccccccggacgccggggcccccagggagattcagggggatccaggcggaga
cgcttggctctgcacctggaggagatccagggcgatccagtggatccgctcagctccatt
gggtggattcagggggatccagggggatccggggggaggcacttggctctgcacctggag
gagatccagggggatccagcagatccactcagctccattgagggggatccagggggatct
gggggagacacttggctctgcacctggagatccagggggatccagcggatccgctcagct
ctgccccgtctcctgcagggccctgacgggctcccgggaccccgcgggcagcctggagaa
gcgggcatgcgaggtccgaccggatcctcccccggcccgccaggaccgccgggtgccgga
ggcatcgacggagctcccggacctgagggcagcgcgggccctgaaggtgcccccggaccc
attggctacccaggaccgcgcggggtgaagggagccttcggagcccgcggcctcaagggc
aacaagggggagcagggagaagacggattccctggcttcaagggggacatgggtcccaag
ggggacagggggatccatggggaaccgggacccccgggacaacagggcaaccccggcacg
caggggctgccaggcccccagggtcccgtggggctgccgggggacaagggtcatcccggc
cgagagggaccagccggagagaaggggctgcagggccctgaaggtgcccccggacccatt
ggctacccaggaccgcgcggggtgaagggagccttcggagcccgcggcctcaagggcaac
aagggggagcagggagaagacggattccctggcttcaagggggacatgggtcccaagggg
gacaggggcgatcagggtcccctgggctcccggggcgaggacggtcccgagggacccaag
gggcagacgggtcccgtgggtgacgcagggccgctcagctcccgtctcccatagggaaag
ctgggcctccccgggctccccggctaccccggacgccagggccccaagggctccgctggc
ttcccaggtgccgtggggctggcgggagagaaaggcaagaggggcaaggctggccaggcc
gggcagacaggacagcggggacccccgggcctgccgggagagcgggggctgcccggagcc
acgggggcacccggacccaagggccacgcgggacatgacggagcccccggtgccaccggg
gagaagggtccacagggtccccagggccccaacggattccctggcaccaaagggccaccc
ggtcccgctgggaaggatggcttgccgggacacccggggcagcgcggagagccgggattc
catgggaaaacgggaccgccgggctctgccggcgtggtgggaccccagggaaaatccgga
gagacgggagcggtgggagacagggggcatccgggtccccccggccccccgggagagcag
gggctgcccggagccgccggccgggaaggagccaagggtccggccggcctcaagggcggg
gaaggcccccccggccccccgggacccacaggctctcccggcgagcgaggccctacggga
gcagccggaggcatcggaatgccgggacgcggtggggcgcagggagcccccggtcccacg
ggagagaagggcgctccgggcgagaggggtccgatgggtccggcgggacacgatggcatc
caggggcccgtggggctgccgggtcccggaggccctcccggcccatccggagaagacggc
gacaagggcgagacggggctgccggggcagaagggcagcaaaggcgacaagggcgaagcg
ggcctgccgggaccatcgggaatccagggacccccgggacaccctgggcctgcggtgagt
gaccatggaatgtgctcccccctatcccaagggagcatcccggtctggatgcagtgtctg
gatctggatgcatatctggatctggatgcgttatccagatctggatgcagtatccggatc
tggatgcagtatccggatctggatgaagtatttggatctggatgcagtatccagatctgg
atgcagtatccggatgtggatgcaggatctggatatggatgcaggatccggatctggatg
tgggaccgcccggagcgccgggaccgcgtgggccgcccggaaccagcggagcagaggtgg
gtccagccgctgccgggccagccctgccactggatgggcagaggggatcaccccatcccg
gtgtccggggagccgggagaagcgggagaccccggagctccgggagagcccggatcatcc
ggtcaggatggcgccgctggagacaagggtgacagcggggacccggggctgccgggcccc
cctggtgctgggggagagccgggaccgccgggaccccctggacggaggggaccagtgggg
ctggccgggcgcgagggccgacagggagagaagggagccaagggccagcccggcacggag
gggccacccgggaagacgggtcccacgggggcccagggccccccggggcggccgggctcc
gaagggctccgtgggattcccggtccggctggtgagcagggtctgctgggacccccagga
caagcgggaccccccggccccctgggtcccgtgggattgcccggcctcaagggagacccc
gggaacaagggagacaagggccacgctggactgattggactcattggaccgccaggagag
atgggggagaagggagaccgggggctcccgggtgcccagggcccccccggacccaaggga
gaccccggacccctgggccagaagggctccaaaggctctccggtgagtgccgggatgcag
gcggtgggagcatcccgtagggaagagctagggatcagcgggatcggcctcgccggccac
ccgcccattccagttgcttgcagggcgcgctgggtcccagaggagacaccggcccccccg
gccccccgggacccccgccccgtgcgggccctccacgacggctgccagcaccgccggggt
caggagcggacggtgctcgaggtggcctcatcccgcgtggagcggctcccgctgtccgac
gtggccgtgtccgacttcggcgacgccaaccagaagttcggcttcgagctggggcccgtc
tgcttcctgggctga
DBGET
integrated database retrieval system
