Tinamus guttatus (white-throated tinamou): 104575666
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Entry
104575666 CDS
T08560
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgt03000
]
104575666 (RC3H2)
04121 Ubiquitin system [BR:
tgt04121
]
104575666 (RC3H2)
Transcription factors [BR:
tgt03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104575666 (RC3H2)
Ubiquitin system [BR:
tgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104575666 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phosducin
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
WASH_WAHD
Prok-RING_4
MRC1
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104575666
NCBI-ProteinID:
XP_010221313
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENVKKGGKAGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAVPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSELSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGTDST
SSAHYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIENTMT
ALDDKLLGEKLQYYYSSSEGEDEDSEKEDKDGESTLPESIGEVELSGDGSAVNTGPKGVI
NDWRRFKQLETEQRQEQRREMERLIKKLSMTCRSHLDEETDKQKQKELQEKINGKMTLQE
YNMIHNDEDDEEFLQRYRKQRMEEMRQQLHSGQQFKQVFEITSGEAFLDTVDKEHKTTLI
MIHIYEDDIPGTESLNGCMICLAAEYPTVKFCRVKSSLIGASARFTNNALPALLIYKAGE
LIGNFVRITDQLGEDFFAVDLEAFLQECGLLPEKDLVLLTSIHNPSACYSEDSDLEID
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgaaaatgtgcataaacccatcagcttaggatgctcccacactgtctgcaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatactgac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaaattgagtaatgtaggagagaacaaacattacgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccactaagtggaggaaagggtgttgctagc
ttgaatcagagtgcactgagccgtccgatgcagaggaagcttgtgacactggtcaattgt
cagctggtggaggaagaaggtcgagttagagccatgagagcagctcgatctctgggagaa
agaactgttacagaactgatcttacagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggttgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtgttattggcactagaagatggctctgcgctctcaagaaaagttctggta
ctttttgttgtgcaaaggttagaaccaagatttcctcaggcctccaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgttttaaggttactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcgaagagagcat
gatgcccagattgttcacattgccatggaagcaggacttcgaatatcaccagagcaatgg
tcttcccttctttatggtgacttggcacataagtcacacatgcaatctattattgacaag
cttcaatctccagaatcttttgcgaagagtgtgcaagagttgacaattgtcttgcagcgc
acaggggatcctgcaaacttaaacaggctaaggcctcatttagaacttctagcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagactgtggtacatgggcttgtggatttcattcagaattatagtagaaaaggccat
gaaactccacagccacaaccgaatagcaaatacaaaacaagtatgtgccgagacctccga
caacaagggggatgcccaagaggaaccaattgtacgtttgctcattctcaggaagagctt
gaaaagtatcgtttgaggaacaaaaaaatcagtgcaacagtgagaaccttcccccttcta
aataaagttggcgtaaatagcactgtctcaaccacaacaggaaacgtaatttctgtcata
ggaagccctgaagcaacagggaagatggtgccaagtactaatggaatagctaatctagaa
agtggtgttccccagttgattcctcgctgtgcagacacatccctgagagctttggaaaat
gtcaagaagggagggaaggctggagccaatggccagaatgtgtctggatcccctactgaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctgttcctcctaatattgggacagaagtgaattctgtgcctccaaaatcaagc
ccgtttgttcccagagtacctgtctaccctccacattctgataacgttcagtatttccaa
gaccccaggactcaactgtcctacgaagttccacagtacccacagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttacgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcctatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgccaacctccaaatgagcagaggactgtgcctttaccgagagag
ccttgtggtcacttgaagactggttatgatgagcagctaagacggaagccagagcaatgg
gcacagtaccacacccagaaaactcctcttgtatcctcaacgctgcctatggcaacacca
tctccaacaccaccgtctcctctcttcagcgtagatttcagcacagagttctcggagagt
gtcagtgaattgagtggaactaaatttgaggaagatcatctctcccactattccccatgg
tcttgtggcactattggctcttgtataaatgctattgactcggagcccaaggatgtgatt
gccaactcaaatgctgttctgatggatttggacagtggagatgtcaaacggagagtacat
ttatttgaaactcagagaagggcaaaggaggaagatcctataatcccatttagtgatgga
ccgatcatctccaagtggggtgccatctccagatcatcccgcactggctaccacacaaca
gatcctattcaggccactgcttcccaaggaagtgctactaaacccatcagtgtgtcagat
tacgtcccttatgtcaatgctgttgattcaagatggagttcctatggcacagattccact
tcatcagcacattatgcagaacgggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctcttgagtattgaattacagcaggccaaaagtaattca
ttgttacttcagagagaggcgaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatactgaagactgtgcagatgcaaagccagatcgagacattgaattggagctg
tcagcccttgatacagatgaacctgatggacagggtgaacaaatagaaaacacaatgact
gctttggatgataagctacttggcgagaagctccagtattattacagcagtagtgagggt
gaggatgaagacagtgagaaagaagacaaagatggggagagcacccttcccgaaagcatc
ggggaagttgagcttagcggtgatggcagtgctgtcaacacaggtccaaaaggagtcatc
aatgattggcgaagatttaaacaattggagacagaacagcgacaggagcagcgtagagaa
atggagcgactgataaaaaagttatctatgacatgtagatctcacttggatgaagagact
gataagcagaagcagaaggagcttcaggaaaaaatcaatggaaagatgacattgcaagaa
tataatatgattcacaatgatgaagatgatgaggagtttttacagcgatacagaaagcag
cgtatggaggagatgaggcagcagttacacagtgggcagcaatttaaacaggtttttgag
attactagtggggaagcatttttggacacagttgataaagaacataagaccacactgatc
atgatccatatttatgaagatgatatccctggtactgagtctctgaacggctgtatgatc
tgcctggcagctgagtacccaacagttaaattttgccgagtaaagagttcgctcattggc
gccagcgctcgctttactaacaacgctctgccagctttgctcatctataaggcaggtgaa
ctcatcggtaatttcgtgcgaatcactgaccagcttggagaagatttttttgctgtagac
ctggaggcttttttgcaagaatgcggtctgcttccagagaaagacctagtgctgctgact
tctatacataatccgtctgcgtgttacagtgaagacagtgatctggaaatagactga
DBGET
integrated database retrieval system
