Tinamus guttatus (white-throated tinamou): 104576075
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Entry
104576075 CDS
T08560
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04510
Focal adhesion
tgt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104576075 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104576075 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104576075 (TNC)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104576075 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_2nd
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF
hEGF
NDNF
fn3_2
DUF4998
Motif
Other DBs
NCBI-GeneID:
104576075
NCBI-ProteinID:
XP_010221737
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MGLSTQVLACVILALLHQHASGGLIKRIIRHKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLSSASGDADLKAEIEPVKHYEEHTVNEENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPSAQTAEGRLDTTPYCGGHGNYSTEICGCICEP
GWKGPNCSEPNCPHNCFNRGRCVHGKCVCDEGFTGEDCAQATCPSDCNDQGKCVDGVCVC
FEGYTGADCSEELCPEGCSVHGKCVSGRCVCNEGFIGEDCSEPLCPNNCNNRGRCVDNEC
VCDEGYTGEDCGELVCPNDCFDRGRCINGTCYCEEGYTGEDCGELTCPNDCNNNGRCENG
LCVCHEGFVGDDCSEKRCPKDCNNRGRCVNGRCVCDEGYLGEDCGELRCPSDCHNRGLCV
NGQCVCNEGFIGEDCGELRCPSDCHNRGRCISGQCVCDEGFTREDCGELRCPNDCNNHGR
CVNGQCVCDEGYTGEDCGELRCPEDCHNRGQCVEGQCVCDNGFTGDDCGELACPNNCNNR
GRCVNGQCVCEEGFTGEDCGQRRCPNDCHGRGLCVDGRCVCEEGFVGDDCRERSCPNNCN
NVGRCVEGQCICEDGYIGNDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNEYLVTYVPT
SSGGLDLQFTVPGNQTSATIHELEPGVEYFIRVFAVLKNKKSIPVSARVATYLPAPEGLK
FKSVRETSVQVEWDPLNISFDGWELIFRNMKKEDNGDITSSLKRPETSYMQPGLAPGQQY
NVSLHIVKNNTRGPGLSRVITTKLDAPSQIEAKDVTDTTALITWSKPLAEIEEIELTYGP
KDSPGDRTTIDLFEDENQYSLGNLKPHTEYEVMLISRRGDMESDPMKAVFVTDLDAPKNL
KWVSQTDNSITLEWKNSHANIDNYRIKFAPISGGDHAEITVPKGNQATTRATLTGLRPGT
EYGIGVTAVRQDRESAPATINAGTDLDKPKDLEVSDPTETTLSLRWRRPVAKFDRYRLIY
LSPSGRRNEVEVPVDSTSFILRGLEAGTEYNISLVAEKGRHKSKPTSVKGSTEEEPELGK
LTVSEVNWDGLQITWTATGRTYENFIIQVQESGKPEEPRTITVPGGLRFMNVTGLKANTP
YNITLQGVIQGYRTKPLSVETTTGEHPEVGELTVSDITPESFNLSWTTTSGDFDVFTIEI
IDSNRLLEPMEFNISGNSRTAHISGLSPSTDFIVYLYGITHDFRTQAISTAATTEAEPEV
DNLLVSDATPESFRLSWTADDGVFDSFVLKIRDTKRRSDPLEVIVPGHERTHDISGLKEG
TEYEIELHGVSSGRRSQPINAIATTVVGSPKGISFTDITENSATISWTPPRSRVDNFRIS
YVPVSGGTPSIVTVDGSKTRTKLVKLIPGVDYTVSIISVKGFEESEPISGTLKTALDSPS
GLVVMNITDSEALATWQPAIAAVDNYVVSYVSEDEPEVNQMVSGNTVEYDLNGLRPATEY
TLKVHALKDTQRSETLSTKFTTGLDAPRDLSATEVQSETAVITWRPPRAPVTDYLLIYES
VDGKVKEVILGPETTSYSLTELSPSTQYTVKLQALNRSLKSKVIHTIFTTSGLLYPYPKD
CSQALLNGETASGLYTIYLNGDKAQPLQVFCDMGEDGGGWIVFLRRQNGKEDFYKNWRNY
VAGFGDLKDEFWIGLENLHRITAQGQYELRVDLRDRGETAYAVYDRFSVGDAKSRYRLRV
DGYSGTAGDSMTYHNGRSFSTFDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSH
SQGVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggggctctccacccaggtgctggcctgtgtaatcttagctttgttacaccagcatgcc
agtggtggactcatcaagagaattatccgtcataagcgggagactgggctaaatgtgacc
ttgccagaagataatcaacccgtggttttcaaccacgtctacaacattaaattacctgtt
ggctccctttgctctgtggacctcagttcagctagcggtgatgcagatttgaaggcggaa
attgagccagtcaagcactatgaggagcacacggtgaatgaggagaaccagattgtcttc
acgcaccggatcaacattccccgccgggcttgtggctgcgccgctgctccagacattaag
gatctgctgagcagactggaggagctggaggggctggtatcctccctacgagagcagtgt
gccagcggtgctggatgctgtcccagtgcccaaacagcagaaggtcgtctggacacaaca
ccctattgcggtggacatgggaactacagcacagagatctgcggatgcatctgtgagcct
ggctggaaaggccccaactgctccgaacccaactgcccacacaactgcttcaacaggggc
cgctgcgtccatggcaagtgcgtctgtgacgaaggcttcactggtgaggactgtgcccag
gccacgtgcccgtcggattgtaacgaccaaggcaagtgcgtcgatggggtttgtgtgtgc
tttgaggggtacacgggcgcagactgcagcgaggagctctgccccgaggggtgcagcgtg
catggtaagtgtgtgagcgggcggtgcgtgtgcaacgagggcttcattggcgaggactgc
agtgagcctctctgccccaacaactgcaacaaccgcgggcgctgtgtggacaacgagtgt
gtctgcgacgagggctacactggtgaagactgcggtgagctcgtctgtcccaacgattgc
tttgaccgtgggcgctgcatcaatgggacctgctactgtgaggagggctacaccggggag
gattgcggagagctgacctgccccaacgattgcaacaacaacgggcgctgcgagaatggg
ctgtgtgtgtgtcatgaaggcttcgtgggggacgactgcagtgaaaagaggtgcccaaaa
gactgcaacaaccgtgggcgctgtgtcaacgggcgctgtgtgtgcgatgagggctacctg
ggagaagattgcggagagctccggtgccccagtgactgccacaaccgtgggctctgcgtc
aacgggcagtgtgtgtgcaacgagggattcatcggggaagactgcggagagctccggtgc
cccagtgactgccacaaccgtgggcgttgcatcagcgggcaatgtgtgtgtgacgaggga
ttcaccagggaagactgtggtgagctgcggtgccccaacgattgtaacaaccatgggcgc
tgtgtcaacgggcagtgtgtgtgtgacgagggatacacaggagaagactgtggggagctg
cgatgccctgaagattgccacaacagaggccagtgtgtagaagggcagtgtgtgtgcgac
aacggcttcactggggacgactgtggggagctggcctgccccaacaactgcaacaaccgt
gggcgctgcgtcaacgggcaatgtgtatgtgaggaagggttcacaggagaagactgtggt
caacggcgctgccccaatgactgccatggccggggcctctgcgttgatggacggtgcgtg
tgtgaggaaggctttgttggggatgactgccgtgaacgctcctgccccaacaactgcaac
aacgtgggacgctgtgtcgagggacagtgtatctgtgaggatggttacatagggaacgac
tgttctgatgtgtcacctccaactgagctgactgtgacaaatgtaacagataagaccgta
aatctggagtggaagcatgagaatctagtcaatgagtatcttgtcacctacgtccctacc
agcagtggtggcctagatctgcagttcactgtgccaggaaaccagacatctgccactatt
catgaactggagccgggtgtggaatacttcatccgtgtctttgcagtccttaaaaacaag
aagagtattccagtcagtgccagggtagcaacatacctgcctgctccagaaggtctgaaa
ttcaaatcagttagagaaacatccgtccaggtggagtgggatcctctgaacatttcattt
gatggatgggagctgatcttccgtaatatgaaaaaagaggataatggagatataaccagc
agcttgaaaaggccagaaacatcatatatgcagccaggtttggccccagggcaacagtac
aatgtatcccttcatatagtgaaaaataataccagaggaccaggactgtcaagggtgata
acgacaaagcttgatgcccctagccagattgaggcaaaagatgtcacggataccacagct
ctgatcacgtggtccaaacccttggctgaaatcgaagagatagaactcacctatggcccc
aaggacagtccaggggacaggacaaccattgacctctttgaggatgaaaaccaatattcc
cttggaaacctgaagccacacacagagtatgaagtgatgctcatctctcggcgaggggac
atggaaagtgatcccatgaaagcagtctttgtcacagacttggatgctccaaagaacctg
aagtgggtgtcacagacagacaacagcattactttggagtggaagaacagtcatgcaaac
atcgataactacagaattaagtttgctcccatctctggtggagaccatgctgagatcaca
gtgccaaagggcaaccaggcaacaacccgagctaccctcacaggcttgaggcctggaacc
gaatatggcattggagtgacagcagtgagacaggacagggaaagtgctcctgctaccatt
aatgctgggactgatcttgacaaacccaaggatttggaagtcagtgaccccactgaaaca
actttatcccttcgctggagaagaccagtggctaaatttgatcgttaccgcctcatttat
cttagcccttcgggaaggaggaatgaagtggaggtccctgtggacagtacctcttttatc
ctgcgagggttggaggcagggacagaatacaacatcagtctggtggcggagaaaggcaga
cacaaaagcaaacccacgtctgtcaagggttcgactgaggaggaacctgagcttgggaag
ttaacagtgtcagaagttaattgggatggtctccaaatcacctggacagcaactggcagg
acctatgaaaactttatcattcaagtgcaggagtctggcaaaccagaagaacccaggact
atcacagtcccaggtggactgcgttttatgaatgttacaggcctcaaggccaacacacct
tataacatcacacttcaaggtgtaattcaaggctacaggaccaaacccctttctgttgaa
accacgacaggagagcacccagaagttggtgagctaaccgtttccgacattactcctgaa
agcttcaacctttcttggacaaccaccagtggggacttcgacgtctttactattgaaatt
attgattctaacaggttgctggagcccatggaattcaacatctcaggcaactcaagaact
gctcatatctcagggctttctcccagcactgatttcattgtctacctctatgggatcact
catgatttccgcactcaggcgataagtactgcagctaccacagaagcagaaccggaagtc
gacaaccttctggtttcagatgctaccccagagagcttccgtctgtcgtggactgctgat
gatggggttttcgacagttttgttctaaaaatcagggataccaaaaggagatctgatcca
ctggaagtaatagtaccaggccatgagcgcacccatgatatatcggggctgaaagagggt
actgagtatgaaatagagctccatggagttagcagtggacgacgttcccaacccataaat
gcaattgcaaccacagttgttggatctcccaagggaatttctttcacggacatcacagaa
aactcagctacaatcagttggacaccaccacgttcccgtgtggataacttccggatttcc
tacgtccctgtgtcaggaggtactcccagcattgttacagttgatggaagcaagacaagg
accaagctggtgaaattaatcccgggtgtagactacactgttagtatcatctctgtgaaa
ggctttgaagaaagcgaacccatctctggaacactgaaaacagctctggacagtccatca
ggccttgtagtgatgaacatcacagactctgaggcattggcgacctggcagccagcaatt
gccgccgtggataactacgttgtctcctatgtttctgaggatgagccagaagttaatcag
atggtgtcaggaaacactgtggagtatgatctgaacgggcttcgacctgcaactgagtat
acactgaaggtccatgcactgaaggacacacagaggagtgaaaccctttctaccaagttc
actacaggactggatgctccaagagatttaagtgccactgaggttcagtcagaaacagct
gtgataacctggaggcctccgcgtgctcctgtcactgactatctcctcatctatgagtcc
gttgatggcaaagtcaaggaagtcatcctaggccctgagacaacttcctacagtctgaca
gagctgagcccatctactcaatacacggtgaaacttcaggcgctgaacagatccttgaag
agcaaagtgatccacactattttcactacaagtggtcttctctatccttatcctaaagat
tgctcccaggctcttctgaatggagaaactgcctctggactctacacaatctacctgaac
ggggacaaggcacagcctctgcaagtcttctgcgacatgggcgaggatgggggcggatgg
attgtgttcctgaggcgccaaaatggaaaggaagatttctacaagaactggaggaattat
gtggctggttttggagatcttaaggatgaattctggataggtctggagaacctccacaga
atcaccgctcagggccagtatgagctgcgtgtggatctgcgggacagaggtgagacagcc
tacgctgtctatgacaggttcagcgttggagatgctaagagccgctaccgcctaagagta
gatggatacagcggcacagcaggtgactccatgacctaccataatggaaggtccttctcc
accttcgacaaagacaatgattccgccatcaccaactgtgctttgtcatacaagggtgca
ttctggtacaagaattgtcaccgagtcaatctaatgggcagatatggtgacaacagccat
agtcagggcgttaactggttccactggaagggccatgagtactccatccagtttgcagag
atgaagctgagaccctccagcttccgaaatctggaaggaagacgaaagcgagcgtaa
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integrated database retrieval system
