Tinamus guttatus (white-throated tinamou): 104576595
Help
Entry
104576595 CDS
T08560
Symbol
LIG3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104576595 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104576595 (LIG3)
Enzymes [BR:
tgt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104576595 (LIG3)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
104576595 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
104576595
NCBI-ProteinID:
XP_010222286
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNPFTESGGDMKEWYHVKCMFEKL
EKARATTKKIEDITDLEGWEELQDDEKELINRHISEANSKAASTPKKKATVQAKISATGQ
ITSPKKDLLSMVNPSPKKFSGFTAKPKNLEDTSANSSHKFSLSAKKCDPKHKDCLLREFR
KLCAMVADKPSYNVKTQIIQDFLQKGTGGDGFHGDVYLTIKLLLPGVIKIVYNLNDKQIV
KLFSRIFNCSQEEMVRDLEQGDVSETIRLFFEQSKSCPPAAKSLLTIQEVDEFLIQLSKL
TKEDDQQSVLQDIARRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNL
QDVVERVLKNHQEAEKMPGLRRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMYAEI
KYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGQSMILDSEVLLIDNK
TGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPXP
DPLLRDEACHKSFRSGRYDYRVIREGLEGLVLKDTKGNYEPGKRHWLKVKKDYLNEGAMA
DTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCAGGHDDATLARLQTELDM
VKISKDPSKIPSWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRC
TRIRDDKDWKTATNLPQLKELYQLSKEKADVNVVVGEEEESTAGSSGENEGSSRSSTPHK
TIKTPPSKSPAKAKKPEGIKAVFASPQKVEEKRGEKRKSSEVEDNGNKALLDIFTGVRLY
LPPSVKDFDRIRRYFIAYDGDLVQEFDAASATHVIGDVDENPGAKRVSPNWVWECIRKRK
LVAPC
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagaggtactgcgtggactacgccaagcgcggcacggccggctgcaagaag
tgcaaggagaagatcgtgaagggcatggtgcgcattgggaagatcgttcccaaccctttc
acggagtctggcggcgacatgaaggagtggtaccatgtgaagtgcatgtttgagaagcta
gagaaggcgcgggctaccaccaagaaaatcgaagacatcacagacttggaagggtgggaa
gagctacaagatgatgagaaagaattaatcaaccgtcacatttcggaagccaattccaag
gctgcaagtacaccgaagaaaaaagcaacagtgcaagctaagatctctgctactggacaa
ataaccagtcccaagaaagatctgttaagtatggtcaatccatcgccaaagaagttctct
ggcttcacagctaagccaaagaatttagaagatacctctgcaaactcttcccacaagttt
agcttgtctgcaaaaaaatgtgatccgaaacacaaagactgtttgctgcgagagttcagg
aaactctgtgccatggttgcagacaagcccagctataatgtgaaaacacagatcatccag
gacttcctgcagaagggcactggaggagatggttttcatggtgatgtatacctgaccatt
aaactgctgttaccaggtgtcattaaaattgtttacaacttgaatgataagcagattgta
aagctgtttagtaggatttttaactgcagccaagaggaaatggtccgggacttggaacag
ggagatgtttccgagaccatacgcctcttcttcgaacaaagcaagtcctgccctccagct
gccaaaagtctcctgaccatccaagaggtagatgagttcctaatccagctgtcaaagctt
acaaaggaggatgaccagcaaagtgtgctgcaagatatcgcccgcaggtgtacaggcaac
gacctgaaatgcatcatcaggctaatcaagcatgacttgaaaatgaatgcgggtgcaaag
catgtgttggatgctctggatccaaacgcctatgaagccttcaaagcttcacgcaacctc
caggatgtggtagagcgagtcctgaagaaccatcaggaggctgagaagatgccaggtctg
aggagaaccctcagtgtgcaggcctctctgatgactcctgtgcagcccatgctggctgaa
gcctgcaagtctattgagtatgcaatgaagaagtgtccaaatgggatgtatgcggagatc
aaatatgatggggagcgggtacaggtgcataaaaatggagatcatttcagctacttcagc
cgaagcctcaaacctgtcctccctcacaaagtagcccattttaaggatttcatcccccaa
gcttttcctggcgggcagagtatgatcttggattcagaagttcttctgattgataacaaa
actggcaagccgcttcctttcgggactcttggtgtgcacaagaaagctgccttccaagat
gccaatgtttgcctgtttgtgtttgattgcatctatttcaatgatgtcagcctgatggac
aggcccctgtgtgagcgtcgcaagtttctccacgataacatggttgaaatccccnaaccg
gatcctcttctcagagatgaagcatgtcacaaaagcttcagatctggcagatatgattac
cgagttatccgtgagggactggaaggactggtgttgaaagacacaaagggtaactatgag
ccaggaaaacggcactggctgaaggtgaaaaaggactacctcaatgaaggtgcaatggcc
gacacagcagacctggtggtgctgggagctttttatggacaaggcagtaaaggtgggatg
atgtccatcttcctcatgggttgctacgatcccaagagtgagaagtggtgcaccgtgacc
aagtgtgctggtggccatgatgacgccaccttggctcgcctgcaaacggagctggatatg
gtgaagatcagcaaggatcctagtaaaattccaagctggctaaaaattaataaaatctac
taccctgacttcattgttccagatccaaagaaagccccagtgtgggagatcacaggggct
gaattctccaaagcagaagcccacactgcagatgggatctctattcgtttccctcgctgc
acccgcattcgagatgacaaggactggaagacagccaccaatctcccgcagctgaaggag
ctgtaccagctctccaaggaaaaggctgatgtcaatgttgttgttggggaggaagaggag
tccacagctggcagcagtggagagaatgagggaagttccaggtcttccacaccacacaag
actataaaaactcccccaagcaagtcgcccgcaaaggccaagaagccggagggcatcaaa
gcagtctttgcatcccctcagaaagtggaagagaaacgaggggagaagcggaaatcatcg
gaggtggaggacaacggaaacaaggccctgctggacatattcacgggtgtgaggctctac
ctgcccccctcggtgaaggacttcgacaggatccgccggtacttcatcgcgtacgacggg
gacctcgtgcaagagttcgatgcagcctccgcaacacacgttataggggacgttgatgag
aatcctggtgctaagcgtgtgtctcccaactgggtctgggaatgcatccggaaacggaaa
ctggtagccccatgctaa
DBGET
integrated database retrieval system
