Tinamus guttatus (white-throated tinamou): 104576610
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Entry
104576610 CDS
T08560
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104576610 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgt03041
]
104576610 (DHX8)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104576610 (DHX8)
Spliceosome [BR:
tgt03041
]
Complex C
Other components
Step II factors
104576610 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
PhoH
TsaE
Transformer
Cas3-like_C_2
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
104576610
NCBI-ProteinID:
XP_010222301
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MRPPSKPSTSKEAVVKPKSEKEKLKELFPALCRPDNPNVRNMLDEDDVKVAADALKELEA
LMPSADRQGKQRNSDHRSKKRRKSRSRSRDRKRRHRSRSRSRSRTWEKSRGKSRYRSRSR
SRSPSRDHRDREKYVEKSNDRWRDKHIDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGL
RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLN
PNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTLERKRLTRISDPEKWEIKQMIA
ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN
PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG
IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI
GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK
RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI
HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR
AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD
APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT
IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI
QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL
IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT
KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctccttccaaaccatctacaagcaaagaggcagttgtcaagcccaaatcagag
aaagaaaagttgaaggaattatttccagccctctgcaggccagacaatcccaacgtcagg
aatatgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagagcttgaagct
ctaatgcctagtgctgacagacaaggcaagcaaaggaacagtgaccaccggtcaaagaaa
aggaggaagagccgaagccgcagcagggacaggaagcgaaggcacagatctcgttcaagg
tctcgttctaggacttgggagaagagcaggggaaaatccagatatcgctcgaggagcagg
agtcgcagtcccagcagggaccatagggatcgagagaagtatgttgagaagagcaatgat
agatggagagacaagcacatagaccgtccaccacctgaagagccttccattggtgacatt
tacaatggcaaagtgacaagcataatgcaatttggatgctttgtgcagctggaaggatta
aggaagcgctgggagggtttggtccacatctctgagcttcgaagagaaggacgggtggcc
aatgttgctgatgttgtgagcaaaggacaaagagtaaaggtcaaagtgttatcttttact
ggatccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaac
ccaaaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgaggaatcca
gacagacccagtcacctttctctggtaaatgctccagaagtggaggatgataccctcgaa
aggaaacgcctcactcgaatttcagacccagagaaatgggaaataaaacagatgatcgca
gctaatgtgctttccaaagaagagtttcctgacttcgatgaggaaactgggatccttcct
aaagttgatgatgaagaagatgaggaccttgagattgagctggttgaagaagagccacca
ttccttcgaggtcataccaaacaaagcatggatatgagtcccatcaaaatagtaaagaat
ccagatggttccttgtcccaggctgcaatgatgcagagtgcattagctaaagaaagacgg
gaacttaaacaagcccaaagagaagcagagatggattccatccctatggggctcaacaca
cactgggtggatcctcttcctgatgtggatggaagacaaatagctgcaaacatgcgaggt
attgggatgatgcctaatgatatcccagaatggaaaaaacatgcattcggtggcaacaaa
gcttcttatggtaaaaagacccaactttccatcattgaacaaagggagagtctgccaatc
ttcagactaaaggagcagctgatacaagcggtacatgacaaccagattctaattgttatt
ggagagaccgggtctggaaaaacaacacagattacccaatacttggctgaggcagggtat
acatcaagaggaaagattggatgcactcagcctcgcagagttgctgcaatgtctgttgca
aaacgagtgtcagaggaatttggctgctgtctgggacaagaggttggctacactattcgg
tttgaagactgtaccagccctgaaacagtcattaaatacatgacagatggtatgttactg
agggaatgcctgatagatcctgatctgacccaatatgccattatcatgctggatgaagcc
catgagaggaccatccatactgatgttctctttggactcctgaagaagacagttcagaaa
cggcaggatatgaagttgatagtgacatcagcaacactggatgctgtgaaattctctcag
tatttctatgaagctccaatctttacaattccggggagaacatacccagtagaaattctg
tacacaaaagagccagagacggattatttggatgctagtctaattacagtaatgcagatc
cacttaacagaaccaccaggtgacattttggtgtttctaactggtcaggaagagattgac
actgcgtgcgagatcctctatgagaggatgaaatctctaggacccgatgttccagagtta
atcatcttgccagtatactcagctttgcccagtgaaatgcaaaccaggatctttgaccca
gccccaccaggaagcagaaaggttgtcattgccactaacattgctgaaacctctctgact
attgatggaatatattatgtagttgatcctggcttcgtgaagcagaaagtttataactcc
aagactggaattgaccagctggttgttacaccaatttcacaggcccaagcaaagcagcga
gcgggaagagctgggagaacaggaccaggaaaatgctacaggctgtatacagagcgtgct
tatcgagatgaaatgctaaccaccaatgtgcctgaaatccagagaacaaatctggccagt
acagtactctccctgaaggctatggggattaatgatttgctttcctttgactttatggat
gctcccccaatggaaactctcataactgccatggagcaactctacactttgggagctctg
gatgatgaagggctgctcactcgacttgggcgcaggatggcggaattccccttggagccc
atgttgtgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgctcaca
atagtctctatgctgtctgttcagaacgtgttctacaggccgaaggataaacaagccctt
gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctgctggct
gtgtacaattcctggaaaaataataagttttcaaatccctggtgctatgaaaattttatc
caggctcggtccctgcgcagggcacaggacatccgcaagcagatgttgggcattatggac
agacacaagctggatgttgtgtcctgtgggaaggcaacggttcgagtccagaaggccatt
tgtagtgggttcttccgaaatgcagcaaagaaggatccacaggagggttatcggacgctc
attgatcaacaagtagtctatattcacccatctagtgcccttttcaaccggcagccagaa
tgggtggtgtatcacgaactggtgctcaccacgaaggagtacatgcgcgaagtgaccact
attgatccccgctggctcgtggagtttgcgccagctttcttcaaggtttctgacccaacc
aagctgagcaaacaaaagaagcagcagcggctggaacccctgtacaatcgctatgaggag
cccaatgcttggaggatctcccgtgcattcagacgccgatga
DBGET
integrated database retrieval system
