Tinamus guttatus (white-throated tinamou): 104576660
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Entry
104576660 CDS
T08560
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104576660 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgt03041
]
104576660 (PRPF8)
Spliceosome [BR:
tgt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104576660 (PRPF8)
Complex C
U5 SnRNP specific factors
104576660 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104576660
NCBI-ProteinID:
XP_010222355
LinkDB
All DBs
Position
Unknown
AA seq
2321 aa
AA seq
DB search
MSLPPRASVAPVCQNGQTPLAWLQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHG
DMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPW
VIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLE
LDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNY
FYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKI
AFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDD
DEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREH
CPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGL
QVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLT
KLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYY
RFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTK
QRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTP
IENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNY
LKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKS
RLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPL
EKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECN
VMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGL
QFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDR
IHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVF
WDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVW
NLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYF
REAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVL
IPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQ
EAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFW
WTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK
WKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLI
QIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAS
YKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSI
YPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLY
SSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRT
GQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEV
HLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFS
RLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKK
NNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEI
ITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKF
ICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEP
LGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSG
YEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKY
ELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccgccgcgggccagcgtggcacccgtgtgccagaacggccagaccccgctt
gcctggttgcagcagctgcaggcgaagcgctacgcggagaagaggaaattcggcttcgtg
gacgcgcagaaggaggacatgccccccgagcacgtccgcaagatcatccgcgaccatggc
gacatgaccaacaggaagttccgccacgacaagcgcgtctacctgggtgctctgaagtac
atgcctcatgctgttctgaagctcttggagaacatgcccatgccttgggaacaaatcaga
gatgtcccagtcttgtaccacatcacaggggccatctcttttgtgaacgagatcccctgg
gtcatagagcccgtgtacatcgcgcagtgggggtccatgtggattatgatgaggcgagag
aagagggatagacgtcacttcaagaggatgagattccctccctttgatgatgaggagccg
cctctggattatgccgataacatcctggatgtagagcccctggaagcaatccagcttgag
ctggacccagaggaagatgctcctgtgctggactggttctatgaccaccagccgctgaag
gacaacaggaagtacgtgaacggttccacgtaccagcgttggcagttcacgcttcccatg
atgtccacgttgtaccggctggccaaccagctgctcactgaccttgtggatgacaactac
ttctacctgtttgacctgaaagcgttcttcacctccaaggccctgaacatggctattcct
ggaggtcccaagttcgaacctctcgttagagacatcaatcttcaggatgaagactggaat
gaatttaatgacatcaacaaaattatcatcaggcagccgatcaggacagagtacaaaatt
gctttcccgtacctgtacaataatctgccacaccacgtccacctgacctggtaccacact
ccaaatgtcgttttcatcaaaacagaagatcccgatctcccggctttttactttgatccg
ttgatcaatcccatttcacacaggcattctgtcaagagtcaggaaccattgcctgatgat
gatgaagagtttgagttgccggagtttgtggaacctttcctgaaggatactccgctgtac
acagacaatacagccaatggcattgccctgctgtgggccccacggccgttcaacttgaga
tctggcaggactcggagagctcttgacattccccttgtcaagaactggtatcgtgagcac
tgcccagcaggccaaccagtgaaagtgcgagtctcctatcagaagttactgaaatactat
gttctgaatgcactcaagcacagaccccccaaggcccagaagaagaggtacctgttccgc
tctttcaaggccacaaaatttttccagtccacaaagttagactgggtggaagttggcctg
caagtgtgtcgccagggctacaatatgctgaacttgctgatccacagaaagaacctgaac
taccttcacttggattacaacttcaacctgaagccagtgaagaccctcaccaccaaggaa
agaaaaaagtcccgatttggtaacgctttccatctgtgccgagaggtcctgcggctaact
aagctggtggtggacagccatgtccaatacagacttggaaacgtggatgcctttcagttg
gcagatggcttgcagtacatcttcgcccatgtaggtcagctgacaggaatgtacagatac
aagtacaaattgatgaggcagattcgtatgtgcaaggacctgaaacatctcatctattac
agatttaacacaggacctgtgggcaaaggtcctggctgtggcttctgggctccaggctgg
agagtgtggctgttcttcatgaggggcatcacgccgcttctggaacgctggctggggaat
ctgctggccaggcagtttgaaggccgtcactcaaagggtgtagcaaagactgttacgaag
cagcgtgtggagtctcactttgacctggagctgagggcggctgttatgcacgacattctg
gatatgatgccagaagggatcaaacagaacaaagccagaaccatcctgcagcatttgagt
gaggcttggcggtgctggaaggccaatattccttggaaagtgcctgggctgccaactcct
attgagaacatgatcttgaggtacgtgaaggcgaaagctgactggtggacaaacacagct
cactacaacagggagcggatccgtcgtggtgccacagtggacaaaaccgtctgcaagaag
aatctgggccggctgaccaggctctacctgaaagctgagcaggaacggcagcataattac
ttgaaggatgggccttacatcactgcagaagaggctgttgctgtgtacacaaccaccgtg
cactggctggaaagcaggaggttctcacccattcccttccctccgctctcctacaagcat
gacacaaaattgctcatattggccctggaaaggctgaaggaagcctacagtgtgaaatct
cgcctgaatcagtcgcagagagaggagttgggcttgattgaacaagcttacgataatcct
catgaggctctgtctaggatcaaacgacaccttctaactcagagagccttcaaggaggtg
ggtattgagttcatggatctctacagccacttagttcctgtgtatgatgttgagcccctg
gagaaaatcacggatgcttatctggatcagtacttgtggtatgaggctgataagcgaaga
ctcttccctccttggatcaagcctgctgacactgagcctcctccactgttagtgtacaag
tggtgccaagggattaataatctgcaagatgtttgggaaacgagtgaaggtgaatgcaat
gtgatgctggagtctcgctttgagaagatgtatgagaagatcgacctgacgctgctcaac
aggctcttgcgtctcattgttgatcacaacattgctgactacatgacagccaagaacaac
gtggtgatcaactacaaggacatgaatcacaccaactcctatgggattattcgtgggctg
cagtttgcttctttcatcgtccagtattatgggctggtgatggacctgctagtgctgggt
ctgcaccgtgccagtgaaatggcagggcctccccagatgccaaatgacttcctgagcttc
caagacattgctactgaggtggcccatcccatccgcctcttctgcagatacattgaccgt
attcacatcttcttcagatttacagcagatgaggcacgagatttgatccagcgctacctg
acagagcatccagatcccaacaatgagaacattgtaggctacaataacaagaaatgctgg
ccccgggatgctcggatgcgcctcatgaagcacgatgtgaaccttggccgtgctgtgttc
tgggatatcaagaaccgcttgccccgctcagtcaccacagtgcagtgggagaacagcttt
gtgtctgtgtacagcaaagacaaccccaacttgctgttcaacatgtgcgggtttgaatgc
cgcatcctgcccaagtgccgcaccagctatgaggagttcactcacaaggatggggtctgg
aacctgcagaatgaggtcaccaaggagcgcacagctcagtgcttcctgcgcgtggatgac
gagtccatgcagaggtttcacaacagagtgaggcagatcctcatggcatcgggctccaca
accttcactaagattgtcaataaatggaatacagccctgattggcttgatgacatatttc
cgggaagctgttgtaaatactcaggagttgcttgatttactggtgaagtgtgagaataaa
atccagactcgaattaaaattggtctgaattccaaaatgcccagccgtttcccacccgtg
gtgttttacacccctaaagagctaggtgggctgggcatgctgtccatgggccacgttctc
attccacagtccgacctgaggtggtccaagcagacagatgttggcatcactcatttccgc
tccggaatgagtcatgaggaggaccaactgattccgaacttgtatcgttacattcagcca
tgggagagtgaattcattgactcccagagagtttgggcagaatatgccctcaagcgacaa
gaggctatagcccagaacagacgtctgaccctggaggacctggaggactcgtgggacagg
gggatccctcgtattaatacccttttccagaaggaccgacacaccctagcttacgataaa
ggatggagagtcaggactgacttcaaacagtaccaggtcctcaagcagaacccattctgg
tggacacaccagcggcatgacgggaagctctggaatctgaacaactaccgtacggatatg
atccaggcacttggtggagtggaggggatcctggagcacacactctttaagggcacttac
ttcccaacgtgggagggtctcttctgggaaaaggccagtggctttgaggagtccatgaag
tggaagaagctgacgaatgcccagagatcgggtctgaaccaaattccaaacagaagattc
acgctgtggtggtctcctaccattaacagagccaacgtgtatgttgggtttcaggtgcaa
ctggatttgacaggcatcttcatgcatggcaagatccccacgctgaagatttccctcatt
cagattttccgagctcacttgtggcaaaagatccacgagagcatcgtaatggacttgtgt
caggtgtttgatcaagagctggatgctctggagattgagacagtgcagaaagagaccatc
catcctaggaaatcctacaagatgaattcttcctgtgcagatatcctcctctttgcctcc
tacaaatggaatgtgtcacgtccatcactgctggcagattccaaagatgtgatggacagc
accaccactcagaagtactggatagacatccagctgcgctggggagattacgattctcat
gacatcgagcgctatgcgagagcgaagttcctggactacactacagacaacatgagtatc
tatccatctcccacgggtgtgctcatcgccatcgatctggcctacaacttgcacagtgct
tatgggaactggttcccggggagcaaacctctgatccaacaagccatggccaaaattatg
aaagcgaaccctgcgctgtatgtgttgagagaacgaatccgcaagggcttgcagctgtac
tcgtctgagcccacagaaccctacctgtcctcccagaactacggggagctcttctccaac
cagatcatctggtttgtggatgacaccaatgtgtacagggtgaccattcacaagactttt
gaagggaatttgaccacaaaacctatcaacggggccattttcattttcaatcccaggact
gggcagctcttcctgaagatcatccatacatctgtgtgggcaggacagaagcgtctaggg
cagctggccaagtggaagactgctgaagaagtggctgctttgattcgttcacttcctgtg
gaggagcagcctaaacagatcatagtgactcggaaaggcatgttggacccacttgaggtg
cacttgctggatttccccaatattgtgatcaaaggctcggagttgcagctgcccttccag
gcctgtctgaaggtggaaaagtttggtgatctcatcttgaaggctactgaaccccagatg
gttctcttcaacctctatgatgactggctgaaaaccatctcttcctacacggcattctca
cgtctcattctgattctccgggcgctacatgtcaataatgatcgagccaaggttattttg
aaaccagacaagacgaccataacagagcctcaccatatctggccgaccctgacagatgag
gaatggatcaaagtggaggtgcagctgaaggatctgatccttgctgactatggcaagaag
aacaatgtgaatgttgcatccctgacacagtcagagatccgagatattatcctgggcatg
gagatctctgccccatcccagcagaggcagcagattgcagagattgaaaagcaaaccaag
gagcagtctcaactgacagccacacagacccgtaccgttaacaaacacggggacgaaata
atcacctcgacaaccagcaactatgaaacccaaactttctcctccaagactgagtggcga
gtcagagcaatttctgctgccaacctccacttgagaacaaaccacatctatgtttcatca
gacgatataaaggaaacaggctatacttacattcttccaaagaatgttttgaagaagttt
atctgcatctcggatctgcgggcccagattgcaggctacctgtatggagtgagccctccg
gataacccccaagtgaaggagatccggtgcattgtgatggtaccgcagtggggaacacac
cagaccgtgcatctcccagggcagctgccgcaacatgagtatctcaaggaaatggagcct
ctcggctggattcacacccaaccaaacgagtcccctcagctctcaccacaagatgtcacc
acccacgccaaagtcatggctgacaacccgtcctgggatggggagaagaccatcatcatt
acctgcagttttaccccaggctcctgcacactgacagcctacaaactgactccgagcggc
tacgagtggggcaggcaaaacacggacaaagggaacaaccccaagggctacctgccctcc
cattatgagcgggtgcagatgctgctgtcggatcgtttccttggcttcttcatggttcca
gcacaagggtcctggaactacaacttcatgggcgtgcgccacgaccccaacatgaagtac
gagctgcagctcgccaaccccaaggagttctaccacgaggtgcaccggccctcgcacttc
ctcaacttcgcgctgctgcaggagggcgaggtctactcggccgaccgcgaggacctctac
gcctag
DBGET
integrated database retrieval system
