Tinamus guttatus (white-throated tinamou): 104576682
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Entry
104576682 CDS
T08560
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104576682 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104576682 (LSM1)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104576682 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
104576682 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104576682
NCBI-ProteinID:
XP_010222380
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
PDCRPLIGFLRSIDQFANLVLHQTVERIHVGAKYGDIPRGIFVVRGENVVLLGEIDLEKE
SDTPLQQVSIEEILEEQRLEQQAKHESEKLKVQALKARGLAVPRADTLDEY
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
cccgactgccggccgctcatcggcttcctgcgcagcatcgaccagttcgccaacctggtg
ctgcaccagaccgtggagcgcatccacgtgggcgccaagtatggagacatcccgcggggc
atcttcgtggtgcggggcgagaacgtcgtcctgctcggagagatcgacctggagaaggag
agcgacaccccgctgcagcaggtctccatcgaggagatcctggaggagcagcggctggag
cagcaggccaagcacgagtcggagaagctcaaagtgcaggcgctgaaggcgcgcggcctc
gccgtgccgcgcgccgacaccctcgacgagtattag
DBGET
integrated database retrieval system
