Tinamus guttatus (white-throated tinamou): 104577013
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Entry
104577013 CDS
T08560
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104577013 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgt01009
]
104577013 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgt04515
]
104577013 (PCDH9)
Protein phosphatases and associated proteins [BR:
tgt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104577013 (PCDH9)
Cell adhesion molecules [BR:
tgt04515
]
Cadherins
Protocadherins
104577013 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
104577013
NCBI-ProteinID:
XP_010222740
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPTTK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPFSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
SSYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRNKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDXSSSNHFSASECSSQGGFKTKGPLHTRQVNEHFYWSISTAYK
CPINQY
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttaccttttggccgctctgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggagatgcccctctggtcaaagtgtccagt
accaccggggagattttcacgacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgctgaagaaaatgagtgtttctttgaacttgaagtggtgattctacccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaacgcacct
atgtttccatctccggttatcaatatctccataccagaaaacactctgatcaacagtcgc
tttccaattccatcagccacagatcctgacacaggtttcaacggcgtgcagcactatgag
ctgttaaatggacagagtgtatttggactggatattgtagagactccggaaggtgagaaa
tggcctcaactgattgtgcagcagaacttggatagagagcaaaaggacacctatgtgatg
aaaatcaaagtggaggatggaggcacccctcagaaatccagcactgctatcctgcaagtc
acagtaagtgatgtcaatgataataggccagtttttaaagagagtcaagtagaggttcat
ataccagagaatgctcctgtaggcacttctgtaattcagcttcatgctacagatgcagac
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctacaactaaa
agattttttgctttaaacaacaccacagggctgattactgttcagaggtccttagatcgg
gaagagaccgctattcacaaggtgacagtgctggctagtgatggtagctccactccggct
cgggcaacggttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtacttatctgagaaagatcctatcaat
acaaagattgctctaattacagtttcagataaggacactgatgtgaatggcaaagtaatc
tgtttcattgagagagaggtcccctttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgccgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctccttttttgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagaacaagagcgtttcattttc
accgttacagccagggacaacggtacccctcctttacagagtcaagcagctgtaattgtt
actgtcttggatgaaaacgacaacagtcccaagtttactcataatcacttccaatttttc
gtgtcggagaacttgccaaagtatagcactgtgggggtgataacggtgactgatgcagat
gctggggaaaataaagcagtgaccctttccattctcaatgacaatgaaaacttcgtgctg
gatcctttctctggagttataaagtccaacgtttcttttgaccgagaacagcagagctcc
tacacctttgatgtcaaggccgttgatggaggacaaccacctcgctcttctacagcgaaa
gtcaccataaatgtcatggatgttaatgataacagccccgttgtcatctacccaccctcc
aatacatcttttaagctagtgccactttcagcaattccaggatcggttgtagcagaagtg
tttgctgtggatatagacactggaatgaacgctgaactgaagtatacgattgtaagtgga
aataacaaaggtttgtttcgtattgaccctgtgacaggtaatatcactctggaagagaaa
ccaactcctaatgatgtggggctacatcgtttagtggtcaacataagtgatctgggttat
cccaaatccttgcatactcttgtgttggtatttttgtatgtaaatgatactgctggaaat
tcctcttacatttacgacttaatacgcaggactatggaaacacccttggaccggaacata
ggggacagcagccagccctaccaaaacgaggactatctcacgatcatgattgctattgtg
gcaggtgctatggttgtcatagtggtgatatttgtcacagttcttgtgcgttgtcgtcat
gcatccaggttcaaagcagcccaaaggaacaagcagggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagttcc
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcggagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaag
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccacgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacnnatct
agttcaaatcatttcagtgcctcagagtgcagctcccaaggaggcttcaagacaaagggc
cccttacacaccagacaggtaaacgagcacttttactggtctataagtactgcatacaag
tgccccatcaaccagtattaa
DBGET
integrated database retrieval system
