Tinamus guttatus (white-throated tinamou): 104577961
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Entry
104577961 CDS
T08560
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104577961 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104577961 (PBRM1)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104577961 (PBRM1)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104577961 (PBRM1)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
104577961 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104577961
NCBI-ProteinID:
XP_010223791
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEE
EDEEGHDNQGGNSELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHSELAKSSLRIRTPSNLTASKLTGPSSQGKGSVGDERNSANKYYRNKRSAQGD
RLSAITMALQYGSESDEDALAAAARYEEGESEAESITSFMDASNPLYQLYDTVRSCRNNQ
GQLISEPFFHLPSKKKYPDYYQQIKTPISLQQIRTKLKNHEYETLDQLESDLNLMFENAK
RYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIRK
QRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKY
AGEEAMIEDMKLMFRNARHYNEEGSQVYNDAHTLEKTLKEKRKELGPLPEDDDVASPKLK
LSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTI
KKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETR
REIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSEXXXXXXXVDPNFPNKPPL
TFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELC
KNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGL
SSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYR
PNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCE
SRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKVDEEKHTENLEDSK
AGESIIHLEKEKEDVPVEVSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRI
EKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCILGKCAVLSFK
DFLSCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQK
EPSPLLEKKIQQLEAKFAELEGGEEDIEEMGEEEGDITETPSLPQLQTPLASDLDIMPYT
PPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRN
LEATKKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIP
PPGVIGQNVSPMIGTPAPGASPFGQQIGILGPPGQQAPPPYPGQSAAAQPVIQQPTTPMF
VSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLK
SKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagaggcgaagagccacctcgccttccagcagcgtcagcggaggagactttgatgat
ggccaccactccacaaatatcccaggcccaagcagaaagaggaggagactttccaatctc
ccaactgtggatcctattgctgtatgccatgagctttacaacacgatcagagattacaaa
gatgaacagggcaggctcctttgtgagcttttcattagggcaccaaaacgaagaaatcag
ccagattattatgaagtggtttctcagccaattgatttaatgaaaatccagcaaaagctc
aagatggaggagtatgatgatgtcaacgtgctgactgctgacttccagctgctctttaac
aacgcaaaggcctactacaagcccgattctcctgaatataaagctgcctgcaaactctgg
gagttgtatttgcgcacaaaaaatgagtttgttcaaaaaggagatgctgaggaggaggag
gaagatgaggaaggacatgacaatcaaggtggaaattctgaattgtcatctccaggttac
ctgaaagagattcttgaacagcttcttgaagctgtggctgtcgccacaaacccatcaggt
cgcctcataagtgaactgtttcagaaacttccttctaaagtgcaatatccagattattat
gcaataataaaggagcccatagatcttaaaacaattgcccaaaggatacagaatggaaca
tataaaagcattcatgcaatggccaaggatatagatcttctagcaaagaatgccaaaacc
tacaatgaacctggatcacaagtattcaaggatgcaaatgcaattaaaaaaatatttaat
atgaaaaaggccgaaattgaacacagtgagttggccaagtcaagtctccgaatcaggact
ccatcaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggcagtgtt
ggcgatgagagaaattctgctaacaaatattatcgtaacaaaagatcagcccaaggggat
cgtttatcagcaataaccatggcattgcaatatggatcagaaagtgatgaagatgctttg
gctgctgctgctcgttatgaagaaggagagtctgaagctgagagcatcacttccttcatg
gatgcttctaatcctctttaccagctttatgataccgttcgaagctgccgaaataatcag
ggccagctcatatctgaaccctttttccatttaccctccaagaagaagtatcctgattat
tatcagcaaattaaaacacctatttcattgcaacagatcagaaccaaactgaagaaccat
gaatatgaaactttagatcagttggagagtgatctgaacctgatgtttgaaaacgcgaag
cgctacaacgttcccaactctgccatctataagagagtactgaaaatgcagcaggttatg
caggcaaagaagaaggagcttgctaggagagatgacattgaggatggggacagcatgatt
tcctctgccacatctgatactggaagctcaaaaaggaaaagtaaaaagaacatacgaaaa
cagcgaatgaaaatcttatacaatgcagttctggaagctcgagaatcaggcacaggcaga
cggctctgtgatctgtttatggttaaaccctccaaaaaggactatccagattactataaa
attattttagagccaatggacttaaaaatgatagagcacaacatccgcaatgataaatat
gcaggggaagaagcaatgattgaagatatgaagctcatgttccgaaatgcaaggcattat
aatgaggagggctcccaggtatataatgatgcccatacactggagaagacccttaaagag
aaaagaaaagagctggggcctctacctgaagatgatgatgttgcgtctcctaaactaaag
ctaagtcgaaaaagtggcatttcccccaaaaaatcaaaatacatgactccgatgcaacag
aaactgaatgaagtttacgaagcagttaagaactacacggataaacgaggcaggcgactg
agtgccatcttcttgaggctgccgtctcgatccgaacttcctgattattatgtaactatt
aaaaagcccgttgacatggaaaaaatcagaagtcacatgatggccaacaaataccaggat
attgattccatggtagaagactttgtgatgatgttcaataatgcctgcacctataatgag
ccagaatctttgatttataaagatgccctggtcttgcataaagttttgcttgaaactcga
agggagatagaaggagatgaggattctcatgtccccaatgtaactttgctaattcaggaa
cttatccataacctgtttgtatctgttatgagccatcaggatgacgaaggcagatgctac
agtgaanntnnnnnnnnnnnnnnnnnngttgatcccaacttcccaaacaaacctcctcta
actttcgacattatccgaaaaaatgttgaaaataatcgctatagaagactagacttgttc
caggagaatatgtttgaggtgcttgagagggcgaggagaatgaaccggaccgattcagag
atttatgaggatgcagttgaacttcagcaattcttcattaaaattcgggacgaactgtgt
aaaaacggagagattcttctgtcaccagctctcagctataccaccaagcaccttcacaat
gatgtagaaaaggaaaagaaggaaaagttgcccaaagaaatagaggaggataaactcaaa
agagaggaggagaagagagaagcagaaaagagtgaagattcttctggatcagctggtctg
tcaagtttacatcggacctacagccaggattgcagcttcaagaacagcatgtaccacgta
ggagactacgtctacgtggagcctgctgaagccaacttgcagcctcacatagtctgtatt
gagagactgtgggaagattctgctggagagaaatggttgtatggctgttggttttatcga
ccaaatgaaacattccatcttgcaacacgaaagtttttggagaaagaagtttttaaaagt
gactattacaataaagttcctgttagcaaaattttaggcaaatgtgtggtcatgtttgtt
aaggaatattttaaattatgtcctgaaaactttcgagatgaagatgtttacgtctgcgag
tcacgttactctgcaaagacaaaatcttttaagaagattaaactgtggactatgcctgtt
agctctgttaggtttgtcccacgagatgtgcctctgcccgtggtccgtgtcgcttctgtg
tttgctaatacagacaaagtggatgaagagaaacacacggaaaacttagaggacagtaag
gcaggagaaagtatcattcatcttgaaaaggagaaagaagatgttccagtagaagtgtcc
aatggagagcctggttgccattactttgaacagctctgttacaacgatatgtggcttaag
gttggggattgtgtcttcataaaatcccatgggttagtgcgacctcgagtaggaagaatt
gagaagatgtgggtacgagatggagctgcatatttttttggtccaatctttatccatcct
gaagaaactgaacatgaaccaactaaaatgttctacaagaaggaagtgtttttgagtaat
ttggaggagtcctgtcctatgacttgcattttgggaaaatgtgctgttctgtcattcaag
gacttcctctcctgcagaccaacagaaatctccgaaaatgatgtttttctttgtgagagc
cgctacaatgaaagtgacaaacaaatgaagaaatttaaagggctcaagaggttttcactc
tccgcgaaagttgtcgatgatgaaatatactactttagaaaacctatagttcctcagaag
gagccatctcccctactagaaaagaagatccagcaactagaagcaaaatttgctgagttg
gaaggaggtgaagaagacatagaagagatgggtgaagaggaaggtgacatcactgaaacc
ccttctctccctcagcttcagacccccttggctagtgacctggatataatgccttacact
cccccacagtccactcccaagtctgttaagggcagcaccaagaaggagggatcaaaaagg
aagatcaacatgagcggttacatcttatttagcagcgagatgagagctgtaatcaaagct
cagcaccctgactactcctttggagagctcagcagacttgtaggaactgaatggagaaac
ctggaagcaaccaagaaagcagaatatgaaggcatgataagtggctatccaccggtgctg
ccgcctttgcagggcccagttgatggcattgttagcatgggcagcatgcagccacttcac
ccaggggtgcccccaccccaccaacttccgccaggtatgccaggcatcccgggcatccca
ccacccggtgttatagggcaaaacgtatcccccatgataggcactccagcaccaggagca
agcccctttggacagcagataggaatcctcggcccgccgggacagcaggcgccgcctccg
tatcccggccagagcgcggccgcgcagccggtcatacagcagcccacgactcccatgttc
gtctccccgccaccaaagacccagcggcttcttcactcggaggcctatctgaaatacatt
gagggcctcagtgctgagtccaacagcattagcaagtgggaccagacccttgcagcacga
agacgggacgtccacctctccaaggagcaggagagccgtctcccctcgcactggctgaag
agcaaaggggctcacaccaccatggccgatgccttgtggcggcttcgagacttgatgctg
cgagacaccctcaacatccgccaggcctacaacatcgaaaatgtttaa
DBGET
integrated database retrieval system
