Tinamus guttatus (white-throated tinamou): 104578220
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Entry
104578220 CDS
T08560
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104578220 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104578220 (SF3B3)
03041 Spliceosome [BR:
tgt03041
]
104578220 (SF3B3)
03036 Chromosome and associated proteins [BR:
tgt03036
]
104578220 (SF3B3)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104578220 (SF3B3)
Spliceosome [BR:
tgt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104578220 (SF3B3)
Complex B
104578220 (SF3B3)
Complex C
U2 SnRNP specific factors
104578220 (SF3B3)
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104578220 (SF3B3)
TFTC complex
104578220 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
104578220
NCBI-ProteinID:
XP_010224069
UniProt:
A0A099ZR54
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGIMVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctacaacctgacgctgcagcgcgccacgggcatcagcttcgccatccatggc
aacttctcaggaaccaagcaacaagaaattgttgtttcccggggcaagatcctggagttg
cttcgccctgaccccaacacaggcaaggtgcacaccttgctcacggtggaagtgttcgga
gtcattcggtccctcatggccttccggctcacggggggcaccaaggactacatcgtggtg
ggcagcgactcggggcgcatcgttatcctggagtaccagccctccaagaacgtcttcgag
aagattcaccaggaaacctttggcaagagtggctgtcgccggattgttcccggccagtac
ttggccgtagatcccaagggccgtgctgtgatgatcagtgccattgagaagcagaagctg
gtgtacatcctgaacagagacgctgccgctcgcctcaccatttcctcccctctggaagcc
cacaaggccaatactttggtctaccatgtggtgggagttgatgtaggatttgaaaaccca
atgtttgcatgtctggaaatggattatgaggaagcggacaacgatccaacgggagaagca
gcagccaacacgcagcagaccttgacgttttatgaactggacttgggtttgaaccatgtg
gttaggaaatacagcgagcccttggaagagcatggcaacttccttataacagttcctggt
ggctctgatggtcccagcggtgtgctgatctgttctgaaaactacattacctataaaaac
tttggtgaccagcctgatatcagatgtccaattcccaggagacggaatgacttggatgat
ccagagagagggatgatttttgtctgctctgctacacacaagaccaaatccatgtttttc
ttcctggctcagacagagcagggagatatcttcaaaattacacttgagactgatgaagac
atggtgacagagattcgactgaagtactttgacaccgttcctgtagctgctgccatgtgc
gtgctgaagacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcatctgggtgacgacgacgaggaaccagagttctcctctgccatgccccttgag
gaaggagatacgttcttttttcagccacgacctctcaagaacctggtgctggtggatgaa
ctggacagtttgtctcctattctgtgctgtcagatagcggatctggccaatgaagacaca
ccccagttgtacgtggcctgtggtcgggggccccggtcatctctgagggttctgagacat
ggacttgaggtatctgaaatggccgtctcagagctgcccggtaaccccaatgctgtgtgg
actgtgaggagacatgttgaagatgaatttgatgcctatatcattgtgtccttcgtaaat
gccacgctggtgctgtccatcggagagactgtagaagaagtgacagactctggcttcctg
ggtactacgcccaccttgtcctgctcccttcttggcgatgatgctttggtgcaggtttat
ccagatggcatccggcacatccgagcagataagagggtgaatgaatggaaaaccccgggg
aagaaaaccattgtaaagtgtgccgtgaaccagagacaagtcgtgatagcgctgactgga
ggagagctggtttactttgagatggacccgtcaggacagctgaatgagtacacggagaga
aaggagatgtcggctgatgtggtttgcatgagcttggccaatgttccacctggagagcag
cgctcccggttccttgctgtcgggttggtggacaacactgtcagaataatttctcttgac
ccttcggactgcctgcagccgctgagcatgcaggccctgcccgcgcagcccgagtcgctc
tgcatcgtggagatgggtggcaccgagaagcaggatgagctgggggagaggggctccatc
ggcttcctctacctgaacattgggctgcagaacggggtgctgctgcgaactgtcctggat
cctgttaccggggatctttccgataccaggaccagataccttggctcgcggcctgtgaaa
ctcttccgagtccgaatgcaaggccaggaggcggtgctggccatgtcgagccgctcctgg
ctcagttattcctatcaatctcgtttccacctgacccccctgtcgtacgaaaccctggag
tttgcgtctggatttgcttcggagcagtgcccagagggcattgtagccatctccacaaac
acgctgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccc
ttgcaatacacgccccgaaaatttgtcatccatcctgagagcaacaacctgatcatcatc
gagaccgaccacaacgcttacactgaggccaccaaagcccagaggaagcagcaaatggct
gaggaaatggtggaggctgcgggagaagatgagagggaactggctgcagagatggccgca
gcctttctgaacgagaatcttcctgagtccatcttcggggctcccaaggcaggaaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggaaatacgttagatctggtc
caactggagcagaatgaagctgctttcagcgtggccgtgtgccgcttctccaacaccggt
gaggactggtacgtgctggtgggagtcgccaaggacttgattctgaacccgcgctcggtc
gctggcggatttgtctacacgtacaagctggtgaacggcggcgagaagctggagtttctg
cacaagacgcctgtggaggaggttcctgcagccattgcccccttccagggtagagtcttg
attggagttggaaagctcttgcgtgtgtatgacctgggcaagaagaaactgcttcggaag
tgtgagaacaagcacattgccaactatatctgtggcatccagaccattgggcacagagtg
atcgtctcagatgttcaagagagtttcatctgggtgcgctacaaaaggaacgagaaccaa
ctcatcatctttgctgatgacacctatccccggtgggtcactacagcaactctcctggat
tacgacacagtggctggagcggacaagtttgggaacatctgtgtggtgaggctgcccccc
aacacaaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggg
ctgcttaatggagcatcacagaaggctgaagtgatcatgaattaccatgttggagagacg
gtgctttccttgcagaagaccacgctgatcccagggggctccgagtctcttgtctatacc
acgttgtcagggggtataggaatcatggtcccttttacttcccacgaggatcacgacttc
ttccagcatgtggaaatgcacttgaggtccgagcaccctcctctctgtggacgagatcac
ctcagtttccgctcctactactttcctgtgaagaatgtgatcgatggggacttgtgtgag
cagtttaactccatggagcctaacaagcagaagaatgtggccgaagagctggaccggacc
ccaccagaggtgtccaagaagctggaggacatccgcacgcgctacgctttctaa
DBGET
integrated database retrieval system
