Tinamus guttatus (white-throated tinamou): 104578536
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Entry
104578536 CDS
T08560
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104578536 (COL25A1)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104578536 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104578536
NCBI-ProteinID:
XP_010224395
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVP
GEPGKPGEQGLTGPQGPAGQKGSVGVPGVPGRDGQVGEPGLPGVAGEKGATGLKGDPGER
GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG
FIGPQGEPGLPGLPGTKGDKGDTGPSGKGERGDPGVPGPKGRTGEAGSRGPKGSKGDTGG
KGDTGSVGPRGPPGQKGDQGTTEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGLQGSKG
EPGSPGTPGVDGEQGPKGSKGDTGEPGMPGEKGRIGLPGLPGSTGMKGEKGDTGLPGAQG
HSIVGPPGPAGPHGPPGPMGPHGLPGPKGVDGPTGPYGPAGPKGERGEKGTAGDPGPRGP
YGLPGRDGEPGLDGFPGPRGEKGDIGEKGEKGFRGIKGEKGEPGQPGLDGLDAPCQLGPD
GLPMPGCWQK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaacgc
cgcctcattaagggggaccaaggacaagctggaccccctgggcctccagggcctccagga
cccagaggtcccccaggagataccggcaaagatggtcctcgagggatgcctggcgtaccg
ggtgagccaggaaagccaggtgaacaaggattgacaggacctcaggggcctgcaggacaa
aagggttctgttggagtgcctggtgtaccagggagagacgggcaagtgggtgaaccaggt
ttgcctggtgtagcaggagagaagggagccacagggcttaagggtgaccctggagagaga
ggagaaaagggtgatgctggagaaaatggacccaagggtgacacaggagaaaagggtgat
cctggttcttctgctgcaggaattaagggtgaacctggtgaatctggacggcctggacaa
aagggtgaaccaggccttcctgggcttcctggactccctgggataaagggtgaaccaggt
tttattggtccgcaaggagagcctgggttaccagggctgccaggaacgaagggtgacaaa
ggggatacaggcccttctggaaagggtgagcgaggtgaccctggagttcctggaccaaag
gggagaacaggtgaagctggatctagaggccccaaagggtcaaagggtgatacaggtggc
aaaggtgacacaggatctgtaggtccacgggggccacctgggcagaaaggtgaccaaggt
acaacggagataattgattataatggcaatatccatgaagctctgcagaggattaccacc
ctaactgtcacgggtccaccaggaccaccaggaccccaaggactgcaagggtcaaagggt
gaaccaggatccccaggaactccaggagttgatggggagcagggtcctaaaggctcaaaa
ggggatacaggtgaacctggaatgcctggagaaaagggcagaattggactgcctggcttg
ccaggttccactggtatgaaaggtgaaaaaggagatactggtttgcctggtgcccaaggc
cattcgatcgtaggaccacctggaccagcagggccacacggtcctccaggccctatggga
cctcatggactgcctggcccaaagggtgtagatggccccactggtccctacggccctgca
ggtcctaaaggggagagaggtgaaaagggaactgctggtgatcccggacccagaggacca
tatggcttgcctggcagagatggcgagcctggccttgatggttttcctggtcctcgagga
gaaaagggtgatataggagaaaagggagaaaagggattccgtggaattaagggggaaaaa
ggggagccaggccagcctggcctggatgggctggatgccccttgccaattgggtcctgat
ggattaccaatgcctggctgttggcaaaagtga
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