Tinamus guttatus (white-throated tinamou): 104578639
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Entry
104578639 CDS
T08560
Symbol
IKBKAP
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgt03016
]
104578639 (IKBKAP)
Transfer RNA biogenesis [BR:
tgt03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
104578639 (IKBKAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
104578639
NCBI-ProteinID:
XP_010224498
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MGDPESLTGERGEKEVTREISLVAEGFLPEDGSGWLVGLEXDXXXXXXXATAAGDILLCK
LSTKEVECVGTVDSGLSTMSWSPDQELVLLVTGQQSLIMMTRDFEPITEKQFHQNDFGEE
KLVALGWGKKETQFHGSEGKQAAHRKQTEVPPVSAWDDGRPRVTWRGDGQFVAVSAVCPD
TGARKIRVWNRELVLQSTSEPISGLEQALAWKPSGSLMASTQEKPNRHDVVFLEKNGLLH
GEFTLPFQKGQVKVNELLWNTDSTILAIWLEELKKEENCNPNCYVQLWTTGNYHWYLKQS
LHFGNLEKNRLVSLLWDPVIPYRLHILCQGWHYLSYDWHWTTNHGMGESGQHGANVAVID
GDKVLVTAFQHAVVPPPMCTYQLQFTQAVNQIAFHTDPKHSGDLAVLDADNRITLYRHGQ
STRKDSTVRLGAVGGNGFKAAVETPSLDKIYRIDVGSITSEVMNPLGLRFLTWLADDSFL
VVGQDQHATQSVLHHLTAPPHVTGAEKQCLDLRLSVSVDGEVISICCSPVTQTVALQLAD
GQVLKYLWEASTPVLEPWQTRSGSAVRFPHPCVQTSLTRINGEEVILGLTDRCRFFINDT
EVASNITSFATYNEFLLVTTNSHTCQCFSLKDTTVKALQGGLSSAAVPSSETLRHVERGS
RIVTVVPQDTKVILQMPRGNLETIHHRALVLAQIQKWLNRLMFREAFQCMRKLRINLNLL
YDHNPKVFLENVETFIKQIDSVNYINLFFTELKEEDFTKSMYPSLNGGSHAQPQQHSGPK
KVNLVCDVMRAAMERIDPHKYCLSILTSYIKKSPPELETALQKVHDLRENISPDATAVSA
EEALKYLLFLVDVNELYDYSLGTYDFDLVIMVAEKSQKDPKEYLPFLNTLQKMETNYQRY
TIDRHLKRYAKALGHLSKCGPEHFSEFLNLVKDQNQYHEALKLYPPGTQEYKDISDAYGD
YLNQKQLHEEAALIFARAGIFAKALDSFLSSGSWQQALCMASRLGYTATLQKLNSDPVCL
FFVVKLVEQRKHAEAAILLEQYTQNYEEAVLLLLEGALWEEALRLIHKYGRLDILETNFK
PALQEAQKSQMMFLDSQRTTFLRHKSRLQVVRDLKEKACEGLQDYEMPNCPELDLISETS
SVVTASDMNSKYSHSNSRISARSSKNRRKAERKRYSLKEGSPFEHVALLEALGESVRAVE
TVKGEIHVLLKQLVLFGYDEQAGELQRVLEEVLHLMETSLPEIWSAELQQSALNPVLGPS
STANSIMAAYQQKRMVAPVVQDPELLIPPKLNKNIQWKLHLLQ
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgggggacccagaatctctgactggggagaggggagaaaaagaggtgaccagagaaatc
tccttggttgcggagggttttttgccagaggatggaagtggctggctcgtgggccttgaa
ngagacnnnnnnnnnnnnnnnnnnnttgctacagcagctggagacatcctgctgtgcaaa
ctcagcacaaaggaggtggaatgtgttggcactgtggacagtggtctgagcaccatgagc
tggagtcctgatcaggagcttgtcttgcttgtaacaggtcagcaaagcctcattatgatg
acaagagattttgaacccattacggaaaagcaattccaccaaaatgattttggagaagaa
aagttagttgctcttggatggggtaaaaaggagacacagttccatggatcagaaggaaaa
caggcagctcatcgcaagcaaacggaagtaccacctgtttcagcctgggatgacggaagg
cctcgagtgacttggagaggagatgggcagtttgttgcagtgagtgctgtctgtccagac
acaggtgctcgcaagatccgagtatggaacagagagcttgtgctgcagtcaacaagtgaa
cctatctcaggattagaacaagcattggcctggaagccctctggaagcttgatggcatcc
acacaagaaaaacccaacagacacgatgttgttttcttggaaaagaatggacttcttcat
ggagagttcaccctccccttccagaaggggcaggtcaaggttaatgaactgctctggaac
acagattctacaatcctggctatatggctggaagagcttaagaaggaagagaactgcaac
ccaaactgttacgttcagctatggaccacaggaaactatcattggtacctgaagcaaagt
ctgcattttggcaacctggagaaaaaccgtttggtatcgctgctgtgggacccagtgatc
ccatatagactccacatcctgtgccagggttggcactacctctcctacgactggcattgg
accaccaaccacgggatgggcgagagtggccagcatggggccaacgtggctgtcatagat
ggagacaaagtactcgtcacagcgttccagcatgccgtggtgccccctccaatgtgtacc
tatcagctccagttcacacaggcagtgaatcagattgcatttcacaccgatcccaagcac
agtggggacctggctgtcctggatgctgataacaggatcaccctctatagacacggacag
agcacaaggaaggactccactgtcagattaggagctgtaggtggaaatggatttaaagca
gctgtggaaacaccatccctggataaaatatacagaattgatgtgggcagcatcaccagt
gaggtgatgaatcccctggggcttcgatttctcacctggctggcagatgacagctttctg
gtggttggtcaggaccagcatgctactcagtctgtccttcaccatctgactgcacctcct
catgtgactggagctgaaaagcagtgcctggatttacggctgtctgtgtcagtagatgga
gaagtgatcagcatctgttgcagcccagtgacccaaaccgtagctctgcagctggctgat
gggcaggtcctgaagtacctctgggaggcttctactccagtccttgagccctggcaaacc
aggagtggttctgctgttcgtttccctcacccttgtgtgcagacttctctcaccaggatc
aatggagaagaggtgatcttaggccttacagatcgatgccgattttttattaatgatact
gaggtagcttccaacatcacctcatttgcaacatacaatgagtttttgttggtgacaacc
aactcccacacctgtcagtgcttctccttgaaggacactacagtgaaagccctgcagggt
ggcctgagcagtgctgcagtgcccagcagcgagaccctgcgccacgtggagcggggctcc
cgtatcgtcaccgtcgtgccccaggacaccaaggtcattctgcagatgccaagagggaat
ctggagaccattcaccaccgagctctagttcttgctcaaattcagaagtggctgaacagg
cttatgttccgggaagcatttcagtgtatgaggaagctgagaatcaacctcaatcttctg
tatgatcataatcccaaggtatttctggaaaatgtggaaacctttatcaagcaaatagat
tctgtgaattacatcaacttgtttttcactgaactgaaagaagaagatttcacaaagagc
atgtacccatctctgaatggtggcagtcatgctcagccacagcagcattcaggtccaaaa
aaagtaaacctcgtgtgtgatgtgatgagagctgccatggaacgcattgaccctcataaa
tactgcctgtcaatactgacatcgtacataaagaaaagtcctccagaactggaaactgct
ctccagaaagttcatgaccttcgagagaatatttccccagatgccacagccgtgagtgca
gaggaagccctgaaatacctgcttttccttgtggatgtcaacgaattgtatgattactcc
ctggggacatacgattttgatttagtcatcatggtggcagaaaaatcgcaaaaggatcca
aaagagtacttacccttcttaaataccctccaaaaaatggaaaccaattatcagcgatac
acaatagacagacacttgaagagatatgccaaagctcttggtcaccttagcaaatgtggt
cctgagcacttctctgaatttctgaacttggtgaaggatcagaatcagtatcatgaagct
ttgaaactgtacccacctggcacccaggagtacaaagacatcagcgatgcctatggggat
tacctgaatcagaagcagctgcatgaagaggctgcactgatatttgctcgtgctggcatc
tttgccaaagcgctggactccttcctgagcagtggcagctggcagcaagccctgtgcatg
gcctcacggcttggttacacagcaactttgcaaaaattgaactctgaccctgtttgttta
ttttttgtagtaaaactggttgaacagaggaagcacgcagaggcggccatacttctggag
caatacactcagaactatgaagaggctgttctcctgctcttagaaggggcgctctgggaa
gaggctttgagactgattcacaagtacggtaggctggatattctggaaaccaacttcaaa
cctgccctccaagaagctcagaaaagtcagatgatgttcctggattctcagagaacaacc
ttcctgcgccataagagccggctgcaggtggtccgagatctgaaagagaaggcctgtgag
ggcctgcaggattacgaaatgccaaattgcccagaattggatcttatctctgaaaccagc
agtgttgtgacagccagtgacatgaacagcaaatattcacacagcaattcaagaatatca
gcacgatcatcaaagaaccggcgcaaggctgagcgcaagaggtacagcttgaaggagggg
agcccttttgaacatgtggcccttctggaagccctgggagaaagtgtccgtgctgtcgag
actgtaaagggagaaatacacgtccttctgaagcagctggtgctgtttgggtatgatgag
caagcaggggaactgcagcgagtcctggaagaggttctgcacctgatggagacctcactg
cccgaaatctggagcgccgagctgcagcagagcgcgctcaacccggtcctgggacccagt
tcaactgcaaacagcattatggctgcctaccagcagaagaggatggtggctcctgttgta
caagatccagaattactcattccaccaaaactcaataaaaatatccagtggaaactgcac
ctgctacagtaa
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