Tinamus guttatus (white-throated tinamou): 104578921
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Entry
104578921 CDS
T08560
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03273
Virion - Lassa virus and SFTS virus
tgt04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104578921 (PCDH1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104578921 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgt01009
]
104578921 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgt04515
]
104578921 (PCDH1)
Protein phosphatases and associated proteins [BR:
tgt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104578921 (PCDH1)
Cell adhesion molecules [BR:
tgt04515
]
Cadherins
Protocadherins
104578921 (PCDH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Mid2
MLANA
Motif
Other DBs
NCBI-GeneID:
104578921
NCBI-ProteinID:
XP_010224802
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MTGRGAGGGKERRGAREAPLRHRMKPLASCLGLWLLCQLPALVSGTRVVYKVQEEQPPNT
LIGSLASDYGFPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPC
YLEFEVSITDLIMNSSPRLLEGQIEVLDINDNTPNFASPVIPLSIHENTNIGTLFPIPMA
MDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKV
QDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPIGHSVLQVKANDSDQGAN
AEIDYSFHQASDMVRRLLRLDRNTGLITVQGPIDREDVSILKFSVLAKDKGANPKSARTQ
VVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTC
VVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSL
KVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSASDADSGSNAELVYSLVMDPSSK
GSFTIDPDSGEIRVKAMLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKF
MLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSIS
FDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSP
GQQVSKVKAEDIDSGVNAELTYSIMGGNPFELFQISPHSGDITLEKEILRKHHGLHRLVV
RVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSN
ILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKV
KKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNS
PLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQ
LPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTT
PDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPNRRPKNALKLST
FVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQ
TSDFQPATTPSSQTTKREIYL
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgacggggcggggtgcgggcggcgggaaggagcgtcgcggcgcgcgggaagctcccctg
cggcacaggatgaagccactggcatcctgcctgggcctgtggctcctctgccagctccct
gccctggtctccgggacgcgcgtggtctacaaggtgcaggaggaacagccacccaacacg
ctcataggaagcctggcctctgactatggcttcccagacatggggcacctctacaagctg
gaagtgggggccccctacctacgtgtggatggcaagactggggacatctacaccacagag
acctccatcgaccgcgagagcttgcgtgagtgccagcacctcctgcccggagaaccctgc
tacctggagtttgaagtgtccattaccgacctgataatgaacagcagccctcgccttctc
gaggggcagatagaggtgctcgatatcaatgacaacacccccaactttgcctctcctgtt
atccctctgtccatccacgagaacaccaacatcgggacactcttccccatccccatggcc
atggaccgtgactcaggccccaacggcgttgcctcctatgagctgatggctggccctgag
gcgcaggagctctttgggctgcaggtggccgaggatcaggatgagaagcagccacagctg
atcgtcatggggaacctggaccgggagcagtgggactcctacgacctgaccatcaaagtg
caggatggaggcaatccgccacgggcaagcagcgccctgctgcgcatcaccatcctggac
atgaatgacaacgcacccaagtttgagaaggccctgtacgaggcagagctctctgagaac
agccccatagggcactccgtcctccaggtgaaagccaatgactcagaccagggcgccaac
gccgagatcgattactccttccaccaggcctcagacatggtgcgccgtctgctgcgcctg
gaccgcaacacggggctcatcacggtgcaggggcccatcgaccgggaggatgtcagcatc
cttaagttctccgtgctggccaaggataagggtgccaaccccaagagtgcccgcactcag
gtggtggtgaccatcaaggacatgaatgacaacgctccctccatagagatacggggcata
gggctcgtcacccaccaggatggtatggcgaacatctcggaggatgtaccagtagagaca
gctgtagctctggtgcaagtatctgaccgagatgaaggtgaaaatgccgttgttacttgt
gtggtggctggtgatgtcccattccagctgcggcaggccagtgaaacgggaagcgacagc
aagaagaagtatttcctgcagaccaccacaccactggactatgagtcagtgaaggactac
accattgagattgtcgcagtggactcggggaacccacccctatccagcaccaactccctc
aaggtgcaggtggtggatgtgaatgacaatgcacccgtcttcagccagagcttcactgag
gtggccttccctgagaacaacgagcccgacgacctggtgatggaggtgagcgccagtgat
gccgacagcggctccaacgccgagctggtttactccctggtgatggacccctcctccaag
ggctctttcaccattgaccccgactctggggagatccgagtgaaagcaatgctggaccga
gaacagcgggagcgctacgaattcttggtggtggcagcagacaagggcagccccagcctc
aagggcacagcgtctgtggccatcaacgtcatggacaggaatgacaacgaccccaagttc
atgctgagcggctacaacttctcggtgatggagaacatgccgcccctcagccctgtgggc
atggtgacggtgatcgatgctgacaaaggagaaaatgcccgcatccagctgtcggtggag
caagacaacggggattttgtgattcagaatggcaccggcaccatcctatccagcatctcc
tttgatcgggaacagcagagtacatacacattccgactcaaggccgtggatggtggggac
cctcctcggtctgcctacgtgggggtgaccatcaatgtgttggacgagaatgacaatgcc
cccttcatcacttcgccttccaacgccacctacaaacacattctgccccacaccagtcct
ggccagcaggtgagcaaggtcaaggcagaggacattgactctggtgtcaatgcggagctc
acctacagcatcatgggtggcaacccctttgagctcttccagatctccccgcacagtgga
gacatcaccctggagaaggagatcctgcgcaagcaccatggcctgcaccgcttagtggtg
cgcgtcaacgacaagggcaagccctcacggcacggcacggcgctggtgcacttctatgtc
aacgagacgctggccaaccgcaccctgttggacacgctggtgggacacagcctggacacc
cctcttgacattgacattgctggtgaccctgaatatgagcgcagcaagcaacgaagcaac
atcctctttggagtcattgctggcatcgtggctgtcaccctggtcatcgtgctggttgtc
ttggtgcgctactgccggcagcgggaggccaagagtggctaccaggcaggcaagaaggag
accaaggacctgtacgcacccaagcaggccagcaagagcggtaagagcaagaacaaagtg
aagaagagcaagtctccaaagccacccaagcccaccgaggatgaggaggagacagggctg
cagaaatcgctcaagttcaaccttatgaacgactccgtcagcgatagcccccgcatccac
ctgcctctcaactacccgccagggagcccggacctggggcgccactaccgctccaactca
cctctaccctccatccagctgcagcctcagtcgccctctgcttccaagaagcaccaggtg
gtgcaggacctgccggccaccaacacctttgttggcaccggggacaacaactcgacaggc
tccgagcagtactcggactacagctaccgcaccaatccccagaaatacaccaacaagcag
ttacctcatcgccgagtgacgttctccgcagccagccaggcccaagacctgcaggatccc
tcccagcacagttactacgacagcgggctggaggagtcggagaccccaagcagcaagtcc
tcgtcggggccccgcattgggcctctagccctgcctgaggatcactacgaacgcaccaca
cccgacggcagcatcggggaaatggagcaccctgagaacgatctccggcctctgcctgat
gtagccatgactgggacctgtacccgggaatgcacagagttcggccactccgacacctgc
tggatgcctggccaatcctcccccaatcgcaggcccaagaatgccctcaaactctccact
tttgtgccttaccaagatagagggagtcaagagcaagtcgggaatggcagccccagactc
tcagaagagcgcagcaccaaaatggccaacctccgcctgctccccacgtacagtgccttc
tccaatagtagccatgagccctgcaaggactctcccatggaggaaattcctctcacccag
acctcggacttccagccagccactaccccctcgtcccaaaccaccaagagggagatatac
ctgtga
DBGET
integrated database retrieval system
