Tinamus guttatus (white-throated tinamou): 104579794
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Entry
104579794 CDS
T08560
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04382
Cornified envelope formation
tgt04510
Focal adhesion
tgt04512
ECM-receptor interaction
tgt04518
Integrin signaling
tgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104579794 (COL4A2)
04518 Integrin signaling
104579794 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104579794 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104579794 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104579794 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgt04147
]
104579794 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104579794 (COL4A2)
Exosome [BR:
tgt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104579794 (COL4A2)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104579794 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104579794
NCBI-ProteinID:
XP_010225547
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MEIVLSAVKVDAGGKTYTGPCGGRDCSGGCQCFPEKGGRGQPGLLGSQGFTGPPGLMGIP
GVQGPKGHKGERGPPGISGPKGEVGQRGVTGFPGADGVPGHPGQPGSRGKPGHDGCNGTT
GDPGDSGIPGLAGFPGTIGIQGPKGQKGEPYILPPDIASQYRGEPGDPGFIGFQGPQGAL
GIQGPVGPRGAPGRPGPPGPPGLQGPQGNRGLGYYGEKGEQGPPGPPGPPGLPTRELMGV
PSDKHKGERGEPGQKGEAGIPGPLIYAPEKGEEGVMGFPGQRGLPGVNGFPGLSGDRGFS
GLDGEPGAYGPRGSKGEQGERGVPGPTSYLPYPIPRKGARGDPGFPGVSGPEGDQGEEGD
PGAPGLPGFSDADGDKPGLPGEIGPKGEKGEDGSPAYQAGPPGFPGKHGTPGLRGPPGPR
GSPGYLFGLKGQQGTPGRTGTQGFPGQRGPKGPKGEVGDCGTCQLGEEVRRGFTGPPGPR
GFPGSPGQPGRKGETGDQGPHGIPGYPGAKGLSGLHGFPGPKGEKGDSLYITTKGTKGIR
GDPGFPGIRGEDGFPGRDGLDGLPGQPGLPGDGIRGFPGDPGYPGELGPKGFPGETGLPG
EGFVGPKGYRGPPGDRGSDGSHGPPGLPGLPGDPGQLDCGQVIEDFSRGDGSEPIWSGAG
CVRPPKGSQGNPGLPGVTGAKGARGFPGDPGPVGYPGLNGTRGDPGREGAPGPPGFTGPR
GDRGPTGLPGLQGHPGLTGKSGVPGPAGLKVIPGEVLGAAAGPRGDAGFPGFPGLKGLPG
DQGVPGIRGADGNPGLPGAKGDPGPQGPPGLIGLPGRPGTHGFPGAPGNPGPEGGPGPQG
PVGPPGARGEDGERGFPGPVGLKGLSGDKGETGYPGLQGIRGVTGPPGISGMDGFPGEKG
LRGSPGIDGFKGMTGLRGRPGIKGIKGKFGSFGAQGDKGTQGAQGFKGDRGDQGPPGEPP
ELKPGMLMEVKGEKGEVGEIGTKGFFGLKGSKGMPGLPGKTGIPGSPGHPSYVAGVKGDI
GAKGLTGLKGYPGQAGSPGIRGFPGNTGGRGEKGIPGISGHFGTPGSHGEIGEPGETINL
PEMPGLKGEVGVPGLTGLRGGIGQKGEGGDPGFPGIEGLKGTQGIPGSVGPEGFPGLVGP
PGQQGSPGTPGSQGVKGTPGWPGLPGQAGLPGLRGISGLHGLPGTKGLPGSPGPDDYGTA
GFPGIIGDKGEAGEPSRVEGGQGPPGQKGDRGVPGIQGSFGISGDVGFPGLPGISNISGY
PGDKGSPGLNGVPGYPGLQGQPGIPAPPGSKGESGQEGVSGQSGPKGSRGDPGPAGRPGA
PGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRGLTGFQGPPGSPGLPPLPPRLVA
EHGSPGPRGNIGPQGSPGDMGPQGPPGDPGFRGTPGNPGPQGRGGVPAPPGFRGEQGATG
EQGPVGFEGQPGRPGSPGLPGMPGRSVSIGYLLVKHSQSEQEPMCPIGMNKLWSGYSLLY
FEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYANRNDKSYWLSTTAPLPMMPVA
EEEIKPYISRCSVCEAPAVAIAVHSQEASIPRCPEGWRSLWIGYSFLMHTAAGDEGGGQS
LVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQSKPSADTLKAGLIRS
HISRCQVCMKNL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagtgctgtcagccgtcaaagtagatgctggtggaaagacttacacaggacca
tgtggaggaagagactgcagtggaggatgtcagtgtttccctgaaaagggaggccgtggc
cagccaggactccttggatcgcaggggttcactggaccaccaggattgatggggatccca
ggagtgcaaggtcccaaaggtcacaaaggtgaaagaggacctccaggaataagtggaccc
aaaggcgaagtggggcaaagaggagtgaccggattccctggggcagatggcgttcctggt
catccagggcagccaggatcaagggggaaaccaggtcatgatggctgtaacgggacaaca
ggtgaccctggtgactcaggaattccaggacttgctggtttccctggcaccattggaatt
caaggaccaaagggccaaaagggggagccctatatactgccaccggacatagccagccaa
tacaggggagaacctggggacccagggttcattggttttcaaggacctcagggtgcactg
ggtattcaaggacctgttggtccaagaggagcgccaggaagaccaggacccccagggccc
ccaggactacaaggaccacaaggcaacagaggccttggttattatggagaaaaaggagaa
cagggcccaccaggtcctccaggtccacctgggcttcctacaagggaactgatgggtgtc
ccctccgacaagcataagggtgaaagaggcgaacctggacaaaaaggagaagctggaatc
ccaggtccacttatctacgctcccgaaaaaggtgaagaaggagtaatgggcttcccagga
cagcggggactgcctggtgtcaatggctttccaggactcagtggagacagaggtttttca
ggacttgatggtgaaccaggtgcttatggtcctagaggaagcaagggagaacagggtgag
agaggtgttccaggacctacttcttatcttccttatcccattccaagaaaaggcgcaaga
ggtgatccaggctttccaggcgtttctggaccagagggagaccaaggagaggaaggagat
cctggtgcacctggtcttcctggattctctgatgctgacggggataagccaggcttacct
ggagaaataggaccaaagggtgaaaaaggtgaagatggttctcctgcttatcaagcaggc
ccacctgggtttccgggcaagcacggcacaccgggactccgtggtccacctggtccccgt
ggatctcctggttatctctttggattaaaaggacagcaggggactccaggtagaactggc
acacaaggctttcctggacaacgaggaccaaaaggacctaaaggcgaagtaggggactgt
ggtacttgtcaactgggtgaagaagtcagaaggggctttactggtccccctggcccacgt
ggttttccaggatctcctggccagcctgggagaaaaggagaaactggtgatcaaggtcca
catggtattcctggttatcctggggcaaagggattgtctggtttgcatggatttcctgga
ccaaaaggagaaaagggagattctttatacataactactaaaggcaccaaaggaattcga
ggagatcctggatttcctggtatcagaggtgaagacggcttcccaggaagggatggctta
gatggtttaccaggacagcctggccttccgggtgatggcatcagaggtttccctggtgat
cctggttatccaggagaattgggcccaaagggctttccaggagaaactggtctgccaggt
gaaggattcgttggcccaaaagggtaccgtggtcctccaggagaccgtggatcagatgga
agccatggacctccaggtttgcctggtctgcccggagatcctggccagctagattgcgga
caagtcattgaagacttttccagaggagatggaagtgagcctatttggtcaggtgcgggc
tgcgtgagaccaccaaagggatcccaaggcaacccaggactgccaggagtcacaggtgca
aaaggtgcaagaggattcccaggtgatccaggtccagtgggttatccagggctaaatggt
acacggggtgatccaggtcgggaaggagccccaggtcctccaggatttacagggcccaga
ggagacaggggcccaactggtttacctggactgcagggccacccaggccttacaggaaaa
tctggagttcctggaccagcaggattgaaagtcattcctggggaagttttaggagcagca
gcaggtcccagaggggatgctggattccctggctttcctgggttgaaaggccttccagga
gatcaaggagtaccgggaattagaggagcggatggcaatccaggcttgccaggagccaaa
ggtgatccagggccccaaggtccccctggtttgattggtttgccaggaagaccaggaaca
catggattcccaggggcaccaggaaatcccgggccagaaggcgggcctggtccacaaggg
ccagtcggtccacctggtgcgaggggggaagatggtgaaagaggcttccctggtcctgtg
ggcctgaaaggtctgtctggggacaagggggaaacaggttacccaggattgcaaggaata
cgtggcgtgactggtccccctggcataagtgggatggatggcttcccaggtgaaaaaggc
ctgaggggttcgcccggcatcgatggtttcaaaggcatgacaggcctgagaggcagacca
ggaatcaaaggaatcaaaggcaaatttggctcttttggcgctcagggggataaaggcacc
cagggcgcacaaggctttaaaggtgaccgtggggaccagggccccccaggagaacccccg
gagcttaagcctggcatgctgatggaagttaaaggtgaaaaaggagaagttggagaaatt
ggcacaaaaggattctttggcttgaaaggtagtaaaggaatgcctggcctacctgggaag
acaggaattcccggctcccctgggcatcccagttacgtggccggggtgaaaggggacatc
ggtgctaaaggcctcacaggtctgaaggggtatcccggtcaggctggctctcccggcatc
cgaggcttccctgggaacacaggaggcaggggagaaaagggtattcccggaatttcaggc
cattttggtactcctggctcacatggtgaaataggtgagccaggagaaaccataaattta
ccagaaatgccaggacttaaaggggaagttggtgtgccaggtttaacaggcttaagagga
ggcataggacaaaaaggtgaagggggcgatcccggtttccctggaattgaaggcctcaag
ggcactcagggtatccctggctccgtgggaccagaaggtttcccaggactggtgggccca
ccaggacagcaaggaagccctgggactcccggctcgcaaggtgtcaagggaactcctggc
tggcccggcttgcctggacaagcgggtttacctggcttaagaggaatcagtggattacat
ggtttgccaggtactaagggcttacccggatcaccaggtccggatgactacggcactgcg
ggcttcccgggtatcattggcgacaagggagaagcaggagaaccaagcagagtggaaggt
ggccagggacctccaggccaaaagggagacagaggtgtcccaggaatccaaggatccttt
ggcatttcaggggacgttggatttccagggcttcctgggatttcaaacatatcaggatat
cctggtgataaaggttctccaggtctcaacggagtgccaggctacccaggactacagggg
cagcccgggataccagctccacctggaagcaaaggagaaagtggacaagaaggtgtgagt
ggacaaagtggcccaaaaggaagcagaggtgatcctggaccagcagggagaccaggagct
ccaggctacccaggaccaaaaggtcgtaagggtgagcaaggtgtcatcggctttatgggc
acagtaggatttccaggcgatttgggacccatcgggcccaaaggggatagaggactaact
ggctttcaggggcccccaggctctcctggcctgcctccacttcctccaaggttggttgct
gagcatggttcaccaggcccccgtggaaatatagggccccaaggaagcccaggagacatg
ggacctcagggcccaccaggcgacccaggtttcaggggcaccccagggaacccaggaccc
cagggccgcggcggcgtccctgctcctcccggcttccgaggggaacaaggagccacaggg
gaacaaggccccgtgggattcgaaggccagccaggccgccccgggagccccgggctgccg
ggcatgccagggcgcagtgtgagcattggctacctgctggtgaagcacagccagtctgag
caggagcccatgtgccccatcgggatgaacaagctctggagtggctacagcctgctgtac
ttcgagggacaagagaaagcacacaaccaggacctagggctggctggctcatgtttggct
cgttttagtactatgcccttcctctactgtaaccccggagatgtttgttattatgcgaat
cgaaatgataaatcctactggctctcaactacagcgcctcttccaatgatgcctgtggca
gaagaagaaattaaaccatatatcagtcgctgctccgtttgtgaggcccccgccgtggcc
attgctgtccacagccaagaagcttccataccccgctgccctgaaggctggcgcagcctg
tggattggatactccttccttatgcacacggcggctggcgatgaaggcggaggacagtcg
ctggtgtctcccgggagctgcctggaagacttcagggctactcctttcatcgaatgcaat
ggcgcacgtgggacatgtcactactttgcaaataaatacagcttctggctcactacgatt
gaccagccgttccaaagcaagccctcagcagatacactcaaggcaggactcatccgaagc
catatcagcagatgtcaagtctgtatgaaaaatttatag
DBGET
integrated database retrieval system
