Tinamus guttatus (white-throated tinamou): 104579814
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Entry
104579814 CDS
T08560
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03013
Nucleocytoplasmic transport
tgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104579814 (PNN)
03015 mRNA surveillance pathway
104579814 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgt03019
]
104579814 (PNN)
03041 Spliceosome [BR:
tgt03041
]
104579814 (PNN)
Messenger RNA biogenesis [BR:
tgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104579814 (PNN)
Spliceosome [BR:
tgt03041
]
Complex C
Other components
EJC/TREX
104579814 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104579814
NCBI-ProteinID:
XP_010225564
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
LAKGSRSLRRPPQSRLLALSGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGATNRLGG
ERRTRRESRHESDAEDDDVKKPALPSSVVATSKERTRRDLIQDQNMDEKGKQRNRRIFGL
LMGTLQKFKQESSVPTDKQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRL
LEQKVELAQLQEEWNEHNAKIIKYIRTKTRPHLFYIPGRMCPATQKLMEESQKKMNALFE
SRRNEFAEQINKMEARPRRQSMKEKEQQEVQTEEKKQQQNKEQEEGKVAQQVEELETGNQ
NNDVEMEEAGEEKGKVGSGHSDAEKEQEEDEQKNEMEIKLEETPEVRENDKQQDGQHEEV
TAAKEEGESVQPVDNEQDAVEMNEVDSVEPVENENSKEVEPETECDAQPGNVCNIPSPEK
EKSIKPEIETEPEGKQEKAPETKPEHEAEAPSQLESVLPPQSPPLSQSIQDGEPRVDKDE
NAVVSIKLTEAQTEQSQTLSVEVKTKTRSRSRGRARNKTSKSHSRSSSSSSTSSTSSSTT
SGSSSSTGSSTSRSSSSSSSTTSGTTSRDSSSSSSTSSESRSRSRGRGHNRDRKRRRSAD
RKRRDASGADRSHKSSKGGSRDAKSSKDKSSRSDRKRSISESSRSGKRTSRSERDRKSDR
KDKRR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagggctcgcgctctctccgcaggccccctcagagcagactgctcgccctctca
ggccctggtggaggtagagggcgcgggagcttattgctaaggcgtggattctcggatagt
ggaggaggacccccagccaagcagagggatcttgaaggtgcaaccaataggctgggtgga
gaacgtcggacaagaagagaatcacgccatgaaagcgacgcagaggatgatgatgttaaa
aagccagcgttgccatcctctgttgttgctacctccaaagagcgaacacgtcgagacctt
atacaggatcaaaatatggatgagaaaggaaagcaaaggaatcgacgtatatttggcttg
ttgatgggcactcttcaaaaatttaagcaggagtcctccgttcctactgacaagcaaaag
aggcgacaagaaattgaacaaaagcttgaagtacaggcagaagaagaaagaaagcaagtt
gaaaatgaaaggcgagaactgtttgaagaaaggcgcgctaagcagacagagctgcggttg
ttggagcaaaaggttgaacttgctcagttgcaagaagaatggaatgagcataatgctaaa
ataattaaatatataagaacgaagacaagaccccacttattctacatacctggcagaatg
tgtcctgctacacaaaaactgatggaagagtcacagaaaaagatgaatgcactctttgaa
agcaggcgcaatgagtttgcagagcagattaacaagatggaggcgaggccccgaagacaa
tctatgaaggagaaagaacagcaggaggtgcagactgaagaaaagaagcaacaacagaac
aaggagcaggaagagggtaaggtggctcagcaggtggaagagttggagacaggtaatcag
aacaatgatgtagaaatggaggaggcaggggaggaaaagggaaaagtaggttcagggcat
agtgatgcagagaaagaacaggaagaggatgaacagaaaaatgaaatggagattaaacta
gaagagactcctgaggtgagggagaatgacaagcagcaggatggtcagcatgaggaggtc
acagctgcaaaagaggaaggtgaaagtgttcagccagtggataatgagcaagatgcggta
gaaatgaatgaggtagatagtgtagaacccgtagaaaatgaaaatagcaaagaagtggaa
ccggaaactgagtgtgatgctcagccaggaaatgtgtgtaacattccttcccctgagaag
gagaaaagtatcaaaccagaaattgaaactgaacctgaaggaaaacaggaaaaggcacca
gaaaccaagccagaacatgaggctgaggccccatctcagctggagtctgtgctaccacca
cagtcacctccgttatctcagtccattcaggatggagagcctcgggtagacaaagatgag
aatgctgtggtgtccataaagttgactgaggcacagactgagcagagccagacactgagt
gtagaagttaaaactaagactagaagtagaagcaggggtagggcaaggaacaaaaccagt
aagagtcatagtcgtagtagcagcagtagtagtaccagtagtacctcaagcagcactaca
agtggaagtagttccagcactggcagcagtactagtcggagtagttctagcagcagcagc
actacaagtggaactactagcagggacagtagcagcagtagctctaccagtagtgaaagt
agaagtcgaagcagagggagagggcataacagagacagaaaacgcaggaggagtgcggat
aggaagcggagggatgcatcaggagcagatagaagtcacaagtcctcaaaaggtggtagc
agagatgcaaaaagctccaaggataaaagttcacgatctgataggaagcggtctatatcg
gaaagtagtcggtcaggcaagagaacgtcacggagtgaaagagaccgtaaatcagacagg
aaagacaaaaggcgttaa
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integrated database retrieval system
