Tinamus guttatus (white-throated tinamou): 104579947
Help
Entry
104579947 CDS
T08560
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104579947
03036 Chromosome and associated proteins [BR:
tgt03036
]
104579947
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104579947
Chromosome and associated proteins [BR:
tgt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104579947
SLIK complex
104579947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CHD1-like_C
CDH1_2_SANT_HL1
Helicase_C
Chromo
HDA2-3
Motif
Other DBs
NCBI-GeneID:
104579947
NCBI-ProteinID:
XP_010225701
LinkDB
All DBs
Position
Unknown
AA seq
1632 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSNGSSSQSGSSDSDSGSESGS
QSESQSDTSREKKQVQAKPPKVDGSEFRKSSPSILAVQRSAVLKKQQQQKTISSDSGSEE
DSPSSEDSADDSSSEIKKKKHKDEDWQMSGSGSVSRTGSDSESEEDGEKSSCEESESDYE
PKNKVKSRKPPSRIKPKSGKKSAGQRKRHLDSSDDDDDEDDYDKRGSRRQATVNVSYKEA
EETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRFGRKGATGAATTIYAVEADGDPNG
GFEKSQEPGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKN
ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED
GALIGKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHENLELRDYQ
LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW
QREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHSQTKRLKFNILLTTYEILLKDKSFLGG
LNWAFIGVDEAHRLKNGDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
SSWEDFEEEHGKGREFGYASLHRELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY
YKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIR
SSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFS
NMDEDDIELEPERNLRNWEEIIPEVQRQRIEEEERQKELEEIYMLPRMRNCAKQISFNGS
EGRRSRNRRYSGSDSDSISERKHPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSETDLRCLGELVHNGCIKALKDNSGPERAGGRLGKVKGPTFRISG
VQVNAKLVISHEEELAPLHKSIPADPEERKRYVVPCYTKAAHFDIDWGKEDDSNLLIGIY
EYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLA
GVGNSKRRKARTKKNKVLKAVKVKEEIKSDSSSPPSEKYDDDDEDNKDEIVSVKRPLKKI
KAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKRKREKKEDKKELKEKDIKEKRENK
VKESTQKEKEVKEEKANETKSENKEKTKKVPLSDTPVHITASSQPVPISEESEELDQKTF
SVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQW
RKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPGKKSYIL
VLEMLNKLCAMK
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggcacagtgatgaagaaagcgtaagaaacagtagtggagagtcaagccgatcg
gatgatgattctgggtcagcatcgggttctggatctggttcaagctctggaagcagcagt
aatggaagcagcagccagtcaggtagcagcgactctgactctggatcagagtcaggcagt
caatcggaatcccaatctgacacgtcgagagagaagaaacaagttcaagctaagccacca
aaagttgatggatctgagtttcggaagtccagtccaagcatacttgccgtgcagagatca
gcagtactcaagaagcaacagcaacaaaagacaatttcatcagacagtggttcagaagag
gactcgcctagtagcgaagattctgcagatgactcatccagtgagatcaagaagaaaaaa
cataaagatgaagactggcaaatgtctggatcggggtcagtatcacgaactggctccgat
tctgaatcagaggaagatggggagaaaagcagttgtgaagaaagtgaatctgactatgag
ccaaaaaacaaagtcaaaagccggaaacctccaagcagaattaagccaaaaagcggcaaa
aagagtgcagggcagagaaagagacaccttgattcatcagatgatgatgacgacgaggat
gattatgataagagagggtctcgtcgccaggcaacagtcaatgttagttacaaagaagct
gaagaaactaagacagattctgatgatctgctggaagtctgtggagaagatgtcccacaa
cctgaagaagatgaatttgaaactatagaaaagttcatggatagtcgatttggccgaaaa
ggagccactggtgctgcaaccaccatctatgcagttgaggcagatggtgatccaaatggt
gggtttgaaaaatctcaggagccaggcgaagtacaatatcttattaaatggaaaggctgg
tcccacatccataatacgtgggaaactgaggaaaccctgaagcaacaaaatgttaaagga
atgaagaagctggacaattataagaaaaaggatcaggaaacaaaacgatggctgaaaaat
gcttctccagaagacgtggaatattataactgccagcaggaacttacagatgatctacat
aaacaatatcaaatagtggaaagaataattgctcattcaaatcagaaatcagcagctggt
tatccagattactattgcaaatggcagggtctgccttactcagaatgtagctgggaagat
ggtgctctcattggtaaaaaatttcaggcatgtattgatgagtattttagcagaaatcaa
tccaagaccactccctttaaggactgcaaggttctgaaacagaggccaaggtttgttgca
ctaaagaagcaaccgtcttatattggagggcatgagaatttagaattaagagattatcaa
ttaaatggactgaactggcttgctcactcatggtgcaaaggaaatagttgtattcttgca
gatgaaatgggtctaggtaaaacaatacaaacaatttcttttctgaactacctgtttcat
gaacatcaactgtatggacctttcttgctggttgtgcctctttctaccttgacatcttgg
caaagagagattcagacttgggctcctcagatgaatgctgtagtttacttaggagatata
actagcagaaatatgataagaactcatgaatggatgcattcacagaccaagcgattaaaa
tttaatatacttctgacaacttatgaaatcttgctgaaggataagtcgttccttggtggt
ttgaattgggcatttataggagtggatgaagctcatcgtctaaaaaatggcgattccctt
ttgtacaagactttaatagacttcaagtctaaccatcgtcttcttattactggaactcct
ctgcaaaactccctcaaagagctttggtccttgctgcacttcatcatgccagaaaaattt
tcttcctgggaagactttgaagaggagcatggcaaagggagagagtttggttatgcaagt
ctccacagagaacttgaaccatttctactgagaagagttaaaaaagatgtagaaaagtct
ttacctgctaaggttgaacaaattttgaggatggaaatgagtgcattgcagaagcaatat
tacaagtggattttaaccaggaattataaagccctgagtaaaggttcaaaaggcagtaca
tcaggctttttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctcatt
aaaccaccagatgataatgaattctataataaacaggaggccttacagcatttaatacgt
agcagtgggaaactaatcctccttgacaagctactgattcgtctgcgagaacgtggcaac
agagttttgattttctctcagatggtgaggatgctggacatcctagcagagtatttgaag
tatcgccagtttccctttcaaagacttgatggatcgataaaaggggaattgaggaaacaa
gcactggatcattttaatgcagaaggatcagaggacttctgctttttactgtctaccaga
gctggaggattaggtataaacttggcatctgctgacactgtggttatatttgattctgac
tggaatccacagaacgatctgcaagcgcaggccagagcccataggattgggcagaagaaa
caggttaatatttatcggctagtcacaaaaggatcagtagaagaagatattcttgaaaga
gccaagaagaagatggtgttagatcacttagtaattcagagaatggacactacagggaaa
actgtgctacatacagggtctactccttcaagctcaacaccctttaataaggaagagtta
tcagcaattttgaagtttggtgctgaggaactttttaaagaacctgaaggggaagagcaa
gagccccaggaaatggatatagatgagatcttgaagagggctgaaacacgggaaaatgag
ccaggcccattaactgtaggagatgagctgctttcacagttcaaggtggccaatttttcc
aatatggatgaagatgacatagaattagaaccagagcgaaatctaagaaattgggaagaa
atcattccagaagtccagcggcaaagaatagaagaggaagagagacaaaaagaacttgaa
gaaatatatatgctcccaaggatgagaaattgtgcaaaacagatcagctttaatggcagt
gaaggaaggcgcagtaggaacagaagatattctgggtctgatagcgactccatctcagaa
agaaaacatcccaaaaaacgtggaagaccacgaactattcctcgagagaatattaaagga
tttagtgatgcagagattagacggtttatcaagagttacaagaaattcggtggccccctt
gaaaggttagatgctatagctagagatgctgagctggttgataaatctgagacagacctt
aggtgcctgggggagcttgttcataatggatgcattaaggctttaaaggacaattctgga
ccagaaagagcaggaggtagacttgggaaagttaaaggcccaacattccgaatatcagga
gtgcaagtaaacgcaaagctggtcatctctcacgaagaagagttggcaccattgcataaa
tccattcctgcagatccagaagaaaggaagagatacgttgtcccatgctacaccaaggca
gctcattttgatatagattggggtaaggaagatgattccaatctgttaataggcatctat
gaatatggttatggcagctgggaaatgataaaaatggatcctgatctcagcttgacacag
aagattttgcctgatgatccagataagaaaccccaggccaagcaattacagacccgtgca
gactaccttattaaattactgaataaagaccttgcaagaaaggaagcacaaagacttgct
ggggtgggcaattcaaagaggaggaaagcaagaactaagaagaacaaagtgctaaaggct
gtgaaagtaaaagaagaaataaaaagtgactcctcttcaccaccttcagaaaaatatgat
gacgatgacgaggataataaggatgagattgtttcagtgaaacgtccacttaaaaaaata
aaagcagaaaaagaaaatgaagaaaagcctgagccagatattggtataaagaaggaagct
gaagaaaaaagagagacaaaagaaaaggagaataagagggatttgaaaaggaaaagggag
aaaaaagaggataagaaagaattaaaagaaaaagatattaaagaaaagagagaaaacaaa
gtaaaagaatccacacagaaagaaaaagaagtaaaggaagagaaggcaaatgaaaccaaa
tctgaaaataaagaaaaaactaaaaaagttccattgtcagatactccggttcatattaca
gcaagtagccagccagttcctatatctgaggaatctgaagaacttgatcagaagacattc
agtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattgaagcagctggatagacca
gagaaaggcctttctgaaagggaacagctggaacatactagacagtgcctaatcaaaatt
ggggatcacattactgaatgtctcaaggagtacacaaatcctgaacagattaaacagtgg
aggaagaatttgtggatatttgtctctaagtttacggaatttgatgccagaaagctgcac
aaactgtataaacatgcaatcaaaaaacgccaagaatctcagcaacacaatgaccagaat
attagcagcaatgtgaatacacatgtgattagaaatccaggtaagaaatcttatattctt
gtgttggagatgttgaataagttatgtgcaatgaaataa
DBGET
integrated database retrieval system
