Tinamus guttatus (white-throated tinamou): 104580001
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Entry
104580001 CDS
T08560
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104580001 (SCAF8)
03041 Spliceosome [BR:
tgt03041
]
104580001 (SCAF8)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104580001 (SCAF8)
Spliceosome [BR:
tgt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104580001 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104580001
NCBI-ProteinID:
XP_010225758
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTP
VLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQ
QLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLM
DRFDFGEESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQ
PQKASPEENPEGNFGSEHSASPSQGSSQQQFLEVETNVDDSIDIQQQDMDIDEGQDVAEE
EIFEQEEKKSTVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSR
SYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIE
SINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDV
DLGVSYIPWEKVKLDDLDGFAEGGMIDQETVNTEWETARSSEAAKENVPTTQSTAVDKST
VITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSPIPPPPFLRASFNP
SQPPPGFMPPPVPPVPPPVVPPPVVPPVVPTPLVQPPLPIAQEAMKDVPFTSLVLPVGTV
SSNLATPTLSTGSIFNPLPSSKPESDEKGSHLADLQISSSENSRAVQNDVSSSSGLGGVQ
PPSVSSSSGLTGEGQPSSVSSSSGLSGGVQPTNVSSSSGHVGGVQPPAVSSSPGLAGGVQ
LPSVSSSNSLAGGVQPTSVSSSSGLMAGVPPPNVSSSSGLLAGVHPPSISSSPGLLTGMQ
PPVVSSSSGLLAGVQPPSVSSSPGLLMMPPPNVSSSSGLMGVPPPNISNSSGLLAMQHPV
GVQSMPHLRFPLMQPGIPPQRGIPPPAILDPALHPPPRGPFPPGDIFTQTERPFGTPGRQ
NIDSISNPEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSPVDVRDPVGRPPVDPREG
IGRPPVDGREHFTRPHVDMRENFGRPGIDNLGRREHFGFNSEKHWGQRGDYDEREHHAFP
MYGGPKGFHEDRERFRHINYRFDSRSGPGWNRGFEQDAHRDFDDRRRPWERQRDRDDRDF
NFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPT
AEVQDDPELYEKLTPSSEINKEKSDTGADIESEPVVESTETEGT
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcggcaatcaaggctataaagttctacaaacacgttgtacag
agtgttgagaagttcattcagaagtgcaaaccagaatacaaggtgcctggtctctatgtc
attgactccattgtgagacagtctcgacatcagtttgggcaagaaaaagatgtgtttgct
ccacgattcagcaataacatcatcagcactttccagaatttgtatcgttgtcccggcgat
gacaagagtaaaattgtcagagtgctaaatttgtggcagaagaacaatgtgttcaagagt
gaaattattcagcctctcctggacatggctgcaggaattcctcctccagttgtgacccca
gtcttgcccagcactacagctgctatgagcaacaatacaccaggaacacctgtgactcca
gttactccagccaacgtggtgcagagtttacctgatccttgggtatctcagattgctaat
acagatacacttgctgctgtagcacaaattttgcaaagtccccaaggccaacagcttcag
cagttaatacagacactgcagattcagcagcagaaacctcagccgtcactccttcaagcc
ctggatgctggtcttgttgttcagttacaggccctcactgcacaacttacagctgcagct
gctgctgccaacacacttaatcctctggagcagagtgtctcttttaataagaagctgatg
gacagatttgactttggggaagaatcggaacaaaatgaagagcctaaaaaggaaactcca
acttcccaactgcctttagtaccagaatctgtgaacaactcactttttcatcaactagct
gaacaactacaacaacaaaatttagaacatctcagacaacagcttctggagcaacagcag
cctcaaaaggcaagccctgaggaaaatccagaaggaaattttggctcagagcactctgca
tcaccttcacaagggagtagtcagcagcaatttttagaagttgaaacaaatgtggatgat
tcaatagatattcaacaacaggacatggatatagatgaaggacaggacgtggctgaggag
gagatttttgaacaagaagaaaagaaatcaactgttcgttcgagatcaagaacacgctca
agatctcgttcaaggtcaccaaggaaacgaaggtctagatcaagatctggttctcgtaag
cgtaagcatagaaaacgttcacgctcaagatcaagagaaaggaagagaaaatcatctcgg
tcgtactccagtgaaagaagggctagggaaagggaaaaggagcgtcagaaaaagggatta
cctcctatacggtcgaaaacactaagtgtttgcagtactactctctgggttggacaagta
gacaagaaggctacgcagcaagatttaaccaatttatttgaagaatttggacaaatagaa
tctattaatatgattcccccaagaggttgtgcttatgtctgcatggttcatagacaagat
gcatatcgtgctcttcagaaacttagttctggatcctataaaattggatctaaaattatt
aagattgcctgggctttaaataaaggtgtgaaaacagagtacaagcagttctgggatgtg
gatctgggagtttcttacatcccttgggagaaagtaaaattggatgatttggatggcttt
gctgaaggtggtatgatagaccaggagacagtaaatactgaatgggaaacagccagaagc
tcagaagctgctaaagaaaatgttccaactacgcagagcactgcagttgataagagcaca
gttattacaacacagacagaagcttacacgcaaccagtcactatgctgcagattccagta
gctccagctgtgcctgctgttagcttagttccaccagcgtttcctgtcacaatgtctgtc
cctcctcctggttatagcccaattcctcctccacccttcttgcgagcaagtttcaaccct
tcacagccacctccaggttttatgcctcccccagttccacctgtcccacctcctgttgtc
ccaccaccggttgtcccaccagtagttccaacacctttagtacagcctccattaccaatt
gcacaagaggcaatgaaagatgttccttttactagccttgttctaccagttggcacagtt
agtagcaatctggccactccaacattatctactggaagcatttttaatcctcttccaagc
agcaaacccgaatcagatgaaaaaggctcacatcttgcagacctccagatttcttccagt
gaaaacagtagagctgtgcaaaatgatgtctcaagtagctctggacttggaggagtgcag
ccacccagtgtttccagcagttctgggcttactggagaagggcagccatccagtgtctca
agtagctctggactttcagggggagtccagccaacaaacgtctcaagcagctctggacac
gtgggaggagtgcaaccaccagctgtttcaagcagtccaggtcttgctggaggagtgcag
ctccccagcgtctccagcagcaattctcttgcaggaggagttcagccaaccagcgtctcc
agcagctctggacttatggctggagtgccaccaccaaatgtctcgagtagctcaggtctt
ctagctggagtgcatccacccagcatctcgagcagccccgggctcctgacaggaatgcag
ccacctgttgtctcgagcagttctggacttctggcaggagtgcagccgcccagtgtctca
agcagccctgggcttctcatgatgcctccacccaacgtttcaagtagctctggacttatg
ggagtgccaccaccaaatatttcaaatagctctggacttctggcaatgcagcatccagtt
ggggttcaaagtatgcctcatttaaggtttccattaatgcagcctggaataccaccgcag
cgcggtattcctcctccagcaatccttgatccagctcttcacccaccgcctcgaggtcct
tttcccccgggagatatttttactcaaacagaaagaccgtttggaacaccaggaagacaa
aatattgatagtatttctaatccagagaaaagactcccgcttggaggtgataatattcaa
caggaaggagacagagattatcgctttccgccagtggaaaacagagataatcttaacagg
ccgtcccccgtggatgtcagagatcctgttgggcgaccaccagttgatccaagagagggt
ataggaagacctccagtggatggaagagaacattttacaagaccacatgtagacatgaga
gagaattttggaagaccaggtatagataaccttggtcgaagggagcattttggtttcaat
tcagagaagcactggggacagagaggagattacgatgaaagagagcaccatgccttccct
atgtatggtggccctaaaggcttccatgaagaccgagagaggtttcggcacataaactat
aggtttgacagtagaagtggtcctggttggaacagagggtttgaacaagatgctcacaga
gattttgatgaccgcagaagaccctgggaaagacagagggatagagatgacagagatttt
aatttttgcagagaaattaacggaaacaggtttggaagagacagaatgtcaaacaactgg
atcccccctccgcatccgagggtttttgaatactttgacggggccacttcgcaacgcaaa
gctgataatatgccccaggtaaatggtgaaaacacagagacagaaagtcagccaccaacc
gcagaggtgcaggacgatccagaactctatgaaaaactgacaccttccagcgagataaac
aaagagaagagtgacacaggagctgatatagaaagtgaaccagtggtagaaagcacagaa
actgaggggacataa
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