Tinamus guttatus (white-throated tinamou): 104580532
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Entry
104580532 CDS
T08560
Symbol
COL15A1
Name
(RefSeq) collagen alpha-1(XV) chain
KO
K08135
collagen type XV alpha
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgt00535
]
104580532 (COL15A1)
Proteoglycans [BR:
tgt00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104580532 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
104580532
NCBI-ProteinID:
XP_010226337
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MLPWHAWWTWDLLLLLLGLSIHAGSAAQIIEERSSKGHLDLTELIGVPLPPSVYFITGYG
GFPAYSFGPDANIGRLTSAIVPLPFYRDFAIVVTVKPNSDRGGVLFAITDAFQKTIYLGM
RLSSVDDNTQRIIMYYTEPGSHISREAASFKVPVMTNRWNRFTVTVQGNEIALFMDCEEY
QRVQFQRSDRALMFESGSGIFVGNAGATGLEKFTGSIQHLTIKSDPRATEDQCEDDDPYA
SGDMSGNGSVQEQEGIPETEEVFSPSHLPIRPEDASAEPVEAPPTVLSRLEENDFSGHHI
SEETTEPAKINEQDSTVTEAGQGSSETISVTQETLREDVGSGVTVLPGVSNGKDQKSQKG
ENGPTGPPEGSGVDEMEKKDQGPPGSPGKPGQDGQPVSIVCIFERGKKGLQGLSGLKGKA
GLKGQKGDPGEGFPGLPGLPGPPGPFASSGEFSILEPEESGSGDLDEETEILSPQTSDVK
ECSPRVKPEPQAIDTLGCDNDEAGTAKAVASHGLPGPPGPPGLPGLPGKPAPDSNVGLPG
SPGEDGASGEPGPEGPQGLPGLDGVVGPPGPKGEKGDRGLLGSVGPKGEPGITGSIGPKG
QAGADGPPGKPGPPGPPGPPGPPGPPGPPGPSYGLGFEDMEGSGSIAMLSESRTPGTRGP
KGSAERHGQHGPFGPKGERGNIGIPGSKGMPGTDGRPGFPGIAGRPGAVGPKGEKGDPGP
QGKPGQDGTSIVGPPGPPGPPGPIIALPELLLNDTDGIFNSTGIKELLGPPGPDGKPGLP
GFPGPQGPKGDTGLPGLRGPKGQQGEKGEPGALVAADGSLTELLGRKGQKGEAGAVGQAG
PMGPIGPPGPKGALGFPGRPGRPGLNGMRGVKGERGEALHGPPGLPGPPGPPGPPGRIVY
IKGTVFPISPRPHCKMPVNTPYPGNQEALNVQGAKGSGDSWGAHSSTNMKGEKGETGAPG
PPGPPLPPSYFSHFINSIKGEKGDNGGPGVKGEKGEPNGGFFLTGPPGPPGRPGSVGPKG
DSIVGPRGPPGLPGLPGLPGYGKTGPPGPPGPPGPPGPPAIYGSAPAFPGPPGPPGEPGL
PATRNLVTTFRNVEGMLEKVHFVAEGTLIYLSETSEVFIRVRNGWRKLQLGELIPIPADS
LPPPALSSHGFQSLPALTPISNMNNGKPALHLVALNLPLAGDMRADFQCFQQAQLAGLTS
TYRAFLSSHLQDLATVVRKTDRYNLPIVNLKGETLFSNWESIFNGNGGQFNPHVPIYSFD
GRNVMTDTSWPQKVIWHGSTANGIRLVSNYCEAWHTADTAVMGQASPLDTGKLLDQKAYS
CSNRFIVLCIENSFISDTQGK
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgctcccatggcatgcctggtggacctgggacttgctactgctgctcttaggcttgtca
atccatgctggttcagctgctcagatcatagaagaacgaagctcaaaaggacatcttgat
ctcacagaattaataggagttcctctccctccctctgtctactttatcactggctatgga
gggtttccagcttacagctttggcccggatgctaacatcggcagattgacaagtgctata
gtaccactgcctttctacagagatttcgctatcgtagttacagtgaaacccaacagtgat
cgtggaggagtactatttgcaataacagatgcctttcagaaaactatttacctgggaatg
agactttcatccgttgatgacaacacccagagaataattatgtactacacagagcctggt
tcccatatttcccgagaggctgcttcatttaaagtgcccgtgatgactaacaggtggaat
aggtttacagtgactgttcaaggaaatgaaattgctttgttcatggactgtgaagaatat
cagagggttcaatttcagagatcagatcgagccttgatgtttgaatctggctctggtata
tttgttggtaatgcaggagccacaggactagaaaaattcacaggctctattcaacatctg
acaatcaaatctgacccaagggctactgaagaccaatgtgaagatgatgatccttacgct
tcaggagacatgagtggcaatggcagtgttcaagaacaagaaggtattcctgagacagaa
gaagtgttttcaccttctcatcttcccataaggcctgaagatgcatcagctgagcctgtg
gaagctcccccaactgtattgtcccgtttggaagaaaatgatttctcaggacatcacata
tcagaagaaacaactgaaccagctaaaattaatgaacaagattcaacagtcacagaagct
ggacaaggcagcagtgaaactatctctgtcacacaggaaacattaagagaagatgttggc
tctggtgttactgttttgccaggagtgagcaatgggaaggaccagaaaagtcagaaagga
gagaatgggcccacaggacctccagaagggtcaggagtagacgagatggagaaaaaagat
caaggacctcctggatctccaggaaaacctggccaagatggtcaacctgtgagtattgtc
tgtatttttgaaaggggaaaaaagggacttcaagggttgtcagggctgaaaggaaaagca
ggcctaaaaggacaaaagggtgatcctggtgagggatttccaggactccctggactacca
ggacccccaggaccatttgcttcttctggtgaatttagtatactggaacctgaagaatca
ggttctggagaccttgatgaagagactgagattttaagccctcagacttctgatgtcaag
gagtgttcaccccgggtaaaacctgagcctcaggctattgacacgcttggctgtgacaat
gatgaagctgggacagccaaagcagttgcttcccatggtcttcctgggccaccaggccct
ccaggattgccaggtcttccaggaaaaccagcacctgattcaaatgtaggacttcctggg
tcaccaggggaagatggggcttctggagaaccaggtcctgaaggtcctcaaggtcttcct
ggtcttgatggagtggttggcccaccgggaccaaagggagaaaaaggtgatcgaggtctt
cttggttctgttggtccaaagggcgaacctggaataactgggtcgataggtccaaaagga
caagcaggagctgatggccctccaggtaaacctggaccacctggaccacctgggcctcct
ggacctcctggacctcctggacccccaggtcccagctatgggttgggatttgaggacatg
gaaggttcaggaagtattgccatgttaagtgaatccagaactcctggaacaagagggcca
aagggttctgcagaaagacatggacagcatggaccatttggaccaaagggtgaaagaggt
aacattggcataccaggttcaaagggaatgccaggtacagatggaagaccaggatttccc
ggcattgctgggcgtcctggagcagtgggtccaaaaggggagaagggtgacccaggacct
cagggtaaaccaggacaggatgggaccagtatagtgggaccacccggaccacctggacca
ccaggaccaatcatagcactacctgagctactactgaatgatacagatggaatttttaat
tccactggaattaaagaattgcttgggcccccagggccagatggcaagccaggtctacca
ggatttcctggccctcagggaccaaagggagatactgggttacctggactacgaggacct
aaaggacaacagggtgaaaagggagaaccaggagctcttgttgctgctgatggatcttta
actgaattattaggaagaaaagggcagaagggagaagctggagcagtaggacaggcagga
ccaatgggaccaataggacctcctggacccaaaggagcacttggtttcccaggacgccca
ggccgcccaggactgaatggaatgagaggtgtgaaaggtgaacgaggtgaagcattacat
ggcccccctggcttgcctggccctccaggaccccctggacctccaggacggatagtttat
atcaaaggaacagttttcccaatctctcccagacctcattgcaaaatgccagtgaacact
ccttacccaggaaatcaagaagctcttaatgtccaaggtgctaaaggaagtggagattcc
tggggagcgcacagttcaacaaacatgaaaggagaaaaaggagagacaggggctccagga
ccaccaggtccacctctgcctccatcatatttcagccactttattaatagcataaagggt
gaaaaaggagacaatggaggccctggtgtaaaaggagaaaaaggagaaccaaatggaggc
ttttttctgacgggacctcctggaccgcctggaagaccaggatcagttggaccaaaaggg
gattccattgtcggacctagaggacctcctggattacctggactacctggtctaccaggt
tatggaaaaactggacctcctggcccaccgggaccaccgggaccaccaggaccccctgca
atatatggctcagcacctgcatttcctgggccaccaggtcctccaggagagccagggtta
cctgcaactaggaatctggttacaacgttccgcaatgtagagggtatgttggaaaaagtt
catttcgtagcagaaggaacactaatctatctgagtgaaaccagtgaggtttttatccgt
gttcgaaatggatggagaaaattgcagcttggtgagttaattcctatccctgctgacagc
cttccacctccagccttatcaagccatggatttcagtctcttccggcattgactccaatt
tcaaatatgaataatggaaaaccagcactgcatctggtggctttaaatttgcctttagct
ggtgacatgcgagcagattttcagtgctttcaacaggcacagctggctggtttgacatct
acctatagagccttcctctcatcacatttgcaagatctagccacagttgtgagaaaaaca
gacagatacaatttaccaatagtcaatcttaagggagaaacacttttcagtaactgggaa
tcaatatttaatgggaacggtggacaattcaatcctcatgtaccaatatactcatttgat
gggagaaatgtcatgacagatacatcttggcctcaaaaagtaatatggcatggttcaact
gcaaacgggatccggctggttagcaactactgtgaagcctggcatacagctgatacagca
gttatgggacaagcatcaccgctggacacggggaaacttcttgatcagaaagcatatagc
tgtagtaatcggtttatcgttctctgcattgaaaacagtttcatatctgatacgcaagga
aaataa
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