Tinamus guttatus (white-throated tinamou): 104580660
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Entry
104580660 CDS
T08560
Symbol
POLR2B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03020
RNA polymerase
tgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104580660 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104580660 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgt03021
]
104580660 (POLR2B)
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104580660 (POLR2B)
Enzymes [BR:
tgt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104580660 (POLR2B)
Transcription machinery [BR:
tgt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104580660 (POLR2B)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104580660 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
104580660
NCBI-ProteinID:
XP_010226468
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MPTARAPTWPRLSNALSSDYFSSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQA
EAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDIT
KTVIKEGEDQLQTQHQKTFIGXXXXXXCPPNGLTDRDLCELNECPLDPGGYFIINGSEKV
LIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIG
QRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQE
QNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLL
LAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLEL
AIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDG
KLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENL
EEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIR
IYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETV
MLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
GVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDS
VIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDKLDDDGL
IAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQVMVTLNQ
EGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIP
SRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFT
GRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDC
QIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPY
ACKLLFQELMSMSIAPRMMSV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggcgcgggcgcccacctggccacggctgagtaacgctctctcttctgattat
ttcagctcctactttgatgagaagggcctggtcaggcagcagctggattcttttgacgag
tttattcagatgtctgtgcagagaattgtcgaagacgctccaccgattgacttgcaagct
gaagcccagcatgccacaggggaggtggaagagccaccccgctacctgctgaagtttgaa
caaatttatctctccaaaccgactcattgggaaagagatggagcaccctcacccatgatg
cccaacgaagcccgactgagaaacctcacatattcagcccctctgtacgtggatataact
aaaacagttattaaggagggggaagaccagttacagacgcagcatcagaaaacgtttata
ggannnnnnnnnnnnnnnnnntgcccgccgaacggcctgaccgaccgtgatctctgtgaa
ctcaatgaatgtcctctcgaccccggtggctacttcatcatcaatggatcggagaaggtt
ctgattgctcaggagaaaatggctacgaacacagtgtacgtgtttgccaagaaagactca
aagtacgcctacacgggagagtgtagatcctgtctggaaaattcctctcgaccaacaagt
accatctgggttagcatgctggccagaggcgggcagggcgcaaagaagagtgctattggc
cagcggattgtagcaactctaccatacatcaaacaagaagtgcccatcataattgtcttc
cgtgcactaggctttgtgtcagacagggacatcttggagcacatcatttatgattttgag
gatccagaaatgatggaaatggtcaaaccctctttggatgaagcctttgtcatccaggaa
caaaacgtcgctctgaacttcattggatcgagaggcgccaagccaggtgtcaccaaagag
aaaagaatcaagtatgctaaggaagtcttgcagaaagagatgctcccacacgttggcgtc
agcgacttctgtgaaaccaaaaaggcctattttttagggtatatggttcacagattgttg
ctggctgcactggggagaagagagcttgatgacagagatcattatggcaacaaaagactg
gatcttgccgggccgctcctagctttcctcttcagaggaatgtttaagaatttgctgaag
gaagtgagaatttatgcacaaaagtttattgacagagggaaagatttcaacttggaactg
gcaatcaaaacaagaattatttcagatggtttgaagtattcattggcgactggaaactgg
ggggatcagaagaaagctcatcaggccagagcaggagtatctcaggtgttgaaccggctg
acattcgcatccaccctgtcccacctgcggcgcctgaattctcccatcggcagagacgga
aaactggcgaagcccaggcagctgcacaacacgctctgggggatggtttgccctgccgag
acgccagagggtcatgcagtggggctcgtgaagaacttagccctgatggcttacatttct
gtggggtctcagccatccccaattttggaattcttggaagagtggagtatggaaaacctg
gaagaaatatctccagcagcgatagccgatgctaccaagatttttgttaatggctgctgg
gtaggaatacacaaagatccagagcaacttatgaacacattgagaaagctgcgtcgccag
atggacatcattgtgtcagaggtctccatgattagggatatccgggagcgagaaatccgc
atctatacagatgcaggcaggatttgtcgtccccttttgattgtggaaaagcagaagttg
ctgttgaagaaaaggcatattgaccagctgaaggagcgagagtataacaactacagttgg
caggacctcgtggccagtggggtagtggagtacattgataccctggaagaggagactgtg
atgctggccatgaccccagacgacctgcaggagaaaggtgttgcctactgttcaacatac
acccactgtgagattcacccctctatgatcctgggagtctgcgcatctattatccctttc
cctgatcacaaccagtctcctaggaatacataccagtctgccatggggaagcaggctatg
ggagtttacattacgaacttccacgtccgtatggatacgctggcacacgtgctctactac
ccccagaagccccttgtgacaactcggtctatggagtacttgcgatttagagagttacca
gcaggtatcaactcgattgtagccattgcatcgtacacgggctataaccaggaagattct
gtcatcatgaaccgatctgctgtggacagaggctttttcagatctgtgttctatcgctcc
tacaaagagcaagagtcgaagaaaggctatgaccaagaggaagtttttgaaaagcctacc
cgtgaaacgtgtcaaggcatgagacatgctatctatgacaaacttgatgatgacggtctg
atagcacccggagttcgtgtgtctggggacgatgttattattggtaaaacggtcactctg
ccagaaaatgaggatgagctggaaagcactaacagacgtttcacaaagagggactgtagc
actttcctgcgaactagtgagacgggtatcgtagatcaggtcatggtgactcttaaccaa
gagggatacaagttctgcaaaattagggtacgctctgtaagaatcccacaaattggagat
aaatttgccagcagacatggtcagaaaggaacctgtggaatccagtacaggcaagaggat
atgcccttcacctgcgagggcatcacgccagacataatcatcaacccccacgccattcct
tcccgcatgaccatcggtcacttgattgaatgtctccagggcaaggtatcggcgaacaag
ggggaaatcggtgatgcgacgccctttaatgatgctgtcaacgtgcagaagatttccaat
ctcctgtcagattatggctatcatctgagaggaaatgaggtcctctacaacggattcact
ggccgaaaaatcacatcgcagattttcatcggtcctacgtattatcagcgactgaagcac
atggtagatgacaaaatccattctcgtgcaagagggccaatccagatccttaacagacag
cccatggaagggagatctcgggacggtggccttcgctttggagagatggagcgtgactgc
cagattgctcacggagcagcccagttcttgagggaaaggttgttcgaagcctcggatcct
taccaagtccatgtctgcaacctctgtgggatcatggcgattgcaaacaccaggactcac
acctacgaatgccggggatgccgtaataaaacacagatctctttggttcgaatgccctat
gcctgcaagctccttttccaagagctgatgtccatgagtattgcacctcggatgatgagt
gtttag
DBGET
integrated database retrieval system
