Tinamus guttatus (white-throated tinamou): 104580933
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Entry
104580933 CDS
T08560
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03030
DNA replication
tgt03420
Nucleotide excision repair
tgt03430
Mismatch repair
tgt03440
Homologous recombination
tgt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104580933 (RPA1)
03420 Nucleotide excision repair
104580933 (RPA1)
03430 Mismatch repair
104580933 (RPA1)
03440 Homologous recombination
104580933 (RPA1)
03460 Fanconi anemia pathway
104580933 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgt03000
]
104580933 (RPA1)
03032 DNA replication proteins [BR:
tgt03032
]
104580933 (RPA1)
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104580933 (RPA1)
Transcription factors [BR:
tgt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104580933 (RPA1)
DNA replication proteins [BR:
tgt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104580933 (RPA1)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104580933 (RPA1)
MMR (mismatch excision repair)
104580933 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104580933 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REPA_OB_2
Rep_fac-A_C
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
104580933
NCBI-ProteinID:
XP_010226789
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MQGENIVKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLAAH
CICQVNRFIVNSLKDGRRVVILMDVDVLKTADMVGGNIGNPVPYNEAPAANAAPSKPQQP
NGNVSAAAPTAPKYHAPSKQFGKPSAPSSVKTPCGSQSKVVPIASLNPYQSKWTICARVT
QKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKT
ANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICK
SYEEVTKITVKSNNREVSKRNVHLMDTSGKLVTATLWGTDAEKFDGSRQPVIAIKGARVS
DFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECTSISDVRGGPATGGNTNWKT
LFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCD
REFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQSAAFLGELKEK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaacatcgtcaagcctgtgctgcaagtcataaatacgcgggctattgct
acaggaaatgggccaccgcgctaccgagtgttgatgagtgatggtgttaacacactctct
tcattcatgctggcgacacagctgaactctcttgtggaagaggaacgcttagcagctcac
tgtatctgccaagttaacagattcattgtcaacagtctgaaagatggaaggagagtggtt
attctgatggatgtggatgtcctgaaaactgcagatatggttggtgggaatattggcaat
ccagtgccatacaatgaagctccagcagcaaatgctgcacccagcaaaccacagcagccc
aatggtaatgtatcagcagcagctcccactgctccaaagtaccatgctccctccaagcag
tttgggaaaccaagtgctcccagctcagtgaagacaccatgtggctcccagtccaaagtc
gtgccaattgccagcttgaacccttaccagtctaagtggaccatttgtgcccgtgttacc
caaaagggccagatccgcacgtggagcaactcccgtggtgaaggaaagctcttctctata
gagctagttgatgaaagtggtgagattagagctaccgcattcaatgatcaagcagacaag
ttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatctgaagact
gctaacaagcaatatacagctgttaagaatgactacgaaattacattcactaatgagact
tcagttgtgccctgtgacgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcaattgttgatgtaattggaatttgtaag
agctatgaagaagtcactaaaattacagtgaaatctaacaacagggaggtgtcaaagagg
aatgtgcacctgatggatacatctgggaagctggtgacagctacgctgtggggaactgat
gctgaaaaatttgatggttctagacaacctgtgatagccatcaaaggagccagagtctct
gacttcggtggtagaagcttgtctgtcctgtcctcaagcacagttgtcatcaaccctgat
agcccagaggcttttaagctccgaggatggtttgactccgaggggcagcttttggaatgt
acctccatctctgatgtgaggggaggacctgcgactgggggaaataccaactggaaaact
ctatttgaagccaaatctgagaacttgggacaaggagataaggcggattattttagctgt
gtgggcacagtggtacatctgcgcaaagagaactgcatgtaccaggcatgtccctctcag
gattgcaataagaaagtgatagaccaacaaaatggactgtaccgttgtgaaaagtgcgat
cgtgagttccccaacttcaagtaccgcatgatgcttctggtgactattgcagactgcctg
gagtatcagtgggtgacttgcttccaagagtcagcagaattcattcttgggcaaagtgct
gctttccttggagagctgaaggaaaag
DBGET
integrated database retrieval system
