Tinamus guttatus (white-throated tinamou): 104580935
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Entry
104580935 CDS
T08560
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04510
Focal adhesion
tgt04512
ECM-receptor interaction
tgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104580935 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104580935 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104580935 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgt04147
]
104580935 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104580935 (COL6A2)
Exosome [BR:
tgt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104580935 (COL6A2)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104580935 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
104580935 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
104580935
NCBI-ProteinID:
XP_010226790
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MFQQAFFSTLLCMVLVPLHAQLDVDSGDISTSSCAEKRDCPINVYFIIDTSESVALQTVP
IQSLVDQIKRFIPVFINKLENEVYQNQVSITWRFGGLHYSDVVEIYSPLTSSKDTYLTKL
YAINYLGRGTFTDCAISNMTEQIQSQMAPGVNFAVVITDGHVTGSPCGGMKMQAERARDM
GIKLFAVAPSDNVYEQGLREIANLPHELYRNNYAITQKDTLDIDVNTTDRIIQVMKHEAY
GECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKGEIGSDGRRGAAGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GQRGDEGAKGDPGRPGRSGPPGPPGEKGSPGIPGNAGAQGPPGSKGGRGEPGPPGPKGEP
GRRGDPGTKGSKGSPGTKGERGDPGPEGPRGLPGEVGSKGARGDQGLPGPRGPSGAVGEP
GNIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGLQGDKGEKGQPGPKGGRGELG
PKGAQGTKGEKGEPGDPGPAGEPGPRGPTGEPGVEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSETGARVGVV
QYSHDGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREKA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQVVCPELPCQTELSVAQCTQRPVDVVFLLDGSER
IGEQNFRKASKFVEEVAQQLTLARSNNDNMNARIALMQYGSEREQDVVFPLTYNLTEISN
ALAQIKYLDSSSNIGSAIIHAINNIVRRPGDTQRVARRNAELSFVFITDGITGSRNLEEA
IDSMKKQDVMPTVVALGSDVDMDVLLKLGLGDRAAIFREKDYASLSQPGFFDRFIRWIC
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcaagcctttttttcgactcttctttgtatggtgctagttcctctccatgct
cagcttgatgtggattctggagacatcagtactagctcctgtgcagaaaagagagactgc
cccatcaatgtgtacttcatcattgacacttcagagagtgttgctctgcagactgtgcct
atccagagccttgtggatcaaataaagcggttcatccctgtgtttatcaataaactggag
aatgaggtctaccagaaccaagtctccatcacttggaggtttggaggccttcattactca
gatgtggtggaaatttacagccctttgacgagcagcaaagacacatacctcaccaagctg
tatgctattaattaccttggccggggcaccttcacagactgcgctatctccaacatgaca
gagcagatccagagccagatggcccctggtgtgaactttgcagtggtcatcacagatggc
catgtaactggcagtccctgcgggggaatgaagatgcaggccgagagggcccgggacatg
gggatcaagctctttgcagtggcccccagcgacaacgtgtacgagcaggggctgcgggag
attgcgaacctgccgcatgagctctatcgcaacaactatgccatcacccagaaagacacc
ctggacatcgatgtgaacactacagacaggataatccaagtcatgaaacatgaagcctac
ggagagtgctacaagatgagctgcctggagattgcaggtccacctggtcccaaggggtat
cgaggacagaagggtgcgaagggcaacatgggtgaaccaggctcccctggactgaagggg
cgacagggtgacccaggtattgaagggccaattggataccctggtcccaagggtgttcca
ggactgaaaggagaaaagggcgagattggatctgatggacgaaggggtgctgctggcttg
gcaggccggaatggcactgatggacagaagggcaggctggggagaattggaccaccaggc
tgtaagggagaccctggtgacaagggccctgatggctacccaggagatgcaggagaccag
ggacaaagaggagatgaaggtgcaaagggagatcctggccggcctggtcgcagtggacct
ccaggacctccaggggaaaaagggagcccgggtattcctggaaatgctggagcccaagga
cctcctggaagcaagggaggacgaggtgaaccaggacctcctggacctaaaggagagcct
ggtcgacgtggagatccagggacaaaaggcagtaaagggagccctggaaccaagggagaa
aggggagatcctggtccagagggtcctcgtggcctgcccggagaggttggaagcaaagga
gcaaggggagatcaaggactgccaggacctagaggcccttcaggtgctgtgggagaacca
ggcaatataggttcacgtggggatcccggtgacttgggcccaagaggtgatgcaggacca
ccaggaccaaagggtgacagaggcagacctggttttagctatcctggccccagaggattg
cagggtgacaagggtgagaaagggcagccaggaccaaagggaggaagaggtgagcttgga
ccaaaaggagcgcaagggacaaaaggagagaagggggaacctggtgatcccggcccagca
ggcgagcctggaccccgaggcccaactggtgaaccaggtgttgagggaactcccggccca
ccaggagatcctggcctaactgactgtgatgtgatgacctatgtaagagaaacatgtgga
tgctgtgactgtgagaagcgctgtggtgccctggacattatgtttgtcatagacagttcg
gagagtattggctacaccaacttcacgctggagaaaaattttgttgtcaatgtggtcagc
cggctgggctctattgccaaggaccccaagtcagaaacaggtgctcgtgttggggtggtg
cagtacagtcatgatgggacctttgaagccatcaaacttgatgatgaacgcatagattca
ctgtccagcttcaaggaagcagtgaaacgtctagagtggattgctgggggcacctggaca
ccatctgctcttcagtttgcctacaacaagctcatcaaagaaagcagacgagagaaagcc
caagtatttgctgtggtgattacagatgggcgctatgacccccgagatgatgacaagaac
ctaggggctctttgtggtagagatgtggttgtcaacaccattggcattggggacatgttt
gatcagccagaacagagtgagaccctggtctccattgcttgcaatgaaccccagcgagtc
cagaagatgagacttttctcagacctggtggcagaggaattcattgataagatggaggat
gtgctctgcccagatccacaggtcgtctgtcctgagctgccctgccaaacagagctttca
gtggcccagtgcacacagcgccccgttgatgtcgtcttcttgctcgatggctctgaacgg
attggggagcagaatttccggaaggcctccaagtttgtggaggaggtagcccaacagctc
acgctggccagaagcaacaatgacaacatgaatgccaggattgccctcatgcagtatggc
agtgagagagagcaggatgtagtcttccccttgacgtacaacctgactgaaatctctaac
gccctagcacagatcaagtatctggattcatcctccaacattgggtcggccatcattcat
gccatcaacaacattgtgcgcaggcctggggacacgcaacgagttgcacgacgcaatgct
gagctctcctttgtctttatcaccgatggcatcacaggaagccggaaccttgaggaggcc
attgactccatgaagaagcaggatgtcatgcccacagttgtggctcttgggagtgatgta
gacatggatgtcttgctgaagcttggcctcggggaccgggcagccatcttccgggagaag
gactatgccagcctctcccagcccggcttctttgataggttcattaggtggatatgttaa
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