Tinamus guttatus (white-throated tinamou): 104581067
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Entry
104581067 CDS
T08560
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04510
Focal adhesion
tgt04512
ECM-receptor interaction
tgt04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104581067 (TNR)
04518 Integrin signaling
104581067 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104581067 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgt00536
]
104581067 (TNR)
Glycosaminoglycan binding proteins [BR:
tgt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104581067 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
FN3_DSCAM-DSCAML_C
EGF_TEN
Pur_ac_phosph_N
EGF_Tenascin
Fn3_Dep-1_3rd
EGF_Teneurin
Fn3_VIN3
Fn3_Dep-1_2nd
FN3_Tor_3rd
EGF_2
Fn3_SaeA_2nd
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
104581067
NCBI-ProteinID:
XP_010226924
LinkDB
All DBs
Position
Unknown
AA seq
1323 aa
AA seq
DB search
MGTDKENPVLRNVLITFNLLLLGAILKPFECRLEVTTEATKRPVMDEEGNVANCSPAIKE
QPMVFHHIYNINVPLDSCCSSIFKSSAEEVSSEDDRMAEYAETSDSESQVTFTHRINFPK
QACKCSTSFPSMQDLLSRIEMLEREVSILRDQCNSNCCQENAATGQLDFLPPCSGHGNFS
LAACGCVCDEGWVGSNCSEPRCPGGCSHRGACVEGQCICDGGYGGDDCSERRCPAACRDR
GLCVDGACLCEEGFAGDDCSWPHCPNSCSGRGACLQGLCACEDGYAAPDCSTVAPPENLR
VAGVGDDSVELVWDGPAAAAEFAVSYEPAGPGGGRLEQRVPGDWRAVTIRSLEPGVTYNL
SIYAIVGNVRGAPATAKVTTHLATPQGLKFKTITETTAEVQWEPFSFPFDGWEISFIPKN
NEGGVIAQLPSSVTTFNQTGLKPGEEYTVTVVALKEQARSPPASDSVSTLIDGPTQILVR
DVSDTVAFVEGTPPRAKVDTILLQYGLVNGGGGKTTSRLQPPLSQYSLQALRPGSRYEVA
VSGLRGTNESDAALTHFTTEIDAPKNVRVGARTAASLELAWDNSEAEVHSYRVVYSTLAG
EQYHEVLVPRDSGPTTRATLADLVPGTEYGIGISAIMDNQQSVPATMNARTELDSPRDLL
VTASTETSISLAWTKASGPIDHYRITFTPASGMASEVTVPRDRSQLTLSDLEPGTEYTIS
IIAERGRQQSLESTVDAFTGVRPITQLHFSHVTSSSVNITWSDPSPPADRLILQYSPQDK
EEAQQLTLDGTRRHASLTGLRPATEYQVSLVAVHGTISSEPIVGSITTGIDAPKDLRVGN
VTQDSMIVYWSPPIATFDHYRLSYQASEGRTDTTAIPRDATEYTLLRLQPATEYEITMKS
VRGREESELASLTAHTAMDAPLGVTATNITPTEALLQWNPPLSDVENYIIVLTHYRVAGE
TILVDGVNQEYQLTNLLPSTTYTVTMYATNGPFTSQTISTNFTTLLDPPTNLTASEVTRR
SALLSWMPPVGEIENYIMTYRSTDGSRKELIVDAEDTWIRLEGLSETTEYTVRLQAAQNA
VRSGFTSTTFTTGGRVFANPQDCAQHLLNGDTLSGVYTISVNGDLGQKVQVYCDMATDGG
GWIVFQRRQNGLTDFFRKWADYRIGFGNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQE
AAYAYYDKFSIGDSRSLYKLRIGEYNGTSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYK
GAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRS
LQL
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacaaggaaaacccagtcctgagaaatgtgctcatcaccttcaacttgtta
ctgctaggcgccattctcaagccttttgagtgccgactagaagtgacaacagaggcaacc
aagaggccagtgatggatgaggaaggcaatgttgccaactgcagcccagccatcaaagag
cagcccatggtctttcaccacatctacaacatcaacgtccccctggacagctgctgttcc
tcaatattcaagtcttcggcagaggaggtgagttcagaagacgacaggatggcggagtat
gcagagacctcagacagcgagagccaggtcaccttcacccacaggataaacttccccaag
caggcctgcaagtgctccacctccttcccgtccatgcaggatctgctgagcagaattgag
atgctggagagggaggtctccattctccgggaccaatgcaactccaattgctgccaagaa
aatgcagccacagggcagctggatttcctgccgccctgcagcgggcacggcaacttcagc
ctggcagcgtgtggctgcgtctgcgatgagggctgggtgggcagcaactgctcggagccc
cgctgccctgggggctgctcacaccgcggtgcctgcgtcgagggccagtgcatctgtgac
ggcggctatggcggcgatgactgctccgagcgccgttgccctgccgcctgccgtgaccga
ggcctctgcgtggacggtgcctgcctctgcgaggagggctttgccggcgatgactgcagc
tggccccattgccccaactcctgcagcggccgtggcgcctgcctccagggactctgtgcc
tgcgaggacggctacgcagcacctgactgctccacagtggcaccaccagaaaacctgcgt
gtggctggtgtgggcgatgacagtgtggagctggtgtgggatggcccagcggcagcggca
gagttcgcggtctcctatgagccagcgggacctgggggcggccggctggagcagcgggtg
cccggtgactggagagcagtgaccattcgatcactggagcctggtgttacctacaacctc
agcatctacgccattgttggcaacgtccgcggtgcccctgccactgccaaggtgacaacc
caccttgccacgccacaggggctgaagttcaagaccatcaccgagacaactgctgaggtg
cagtgggagcccttctccttcccctttgatggctgggaaatcagcttcatccccaagaac
aacgaaggcggtgtgattgcgcagctccccagcagcgtcaccaccttcaaccagacgggc
ctgaagccgggtgaggagtacacggtcactgtggtggccctcaaggagcaagcgaggagc
ccccctgcgtctgacagcgtctccaccttgattgatggtccaacccagatcctggtgcgg
gacgtctctgacactgtggccttcgtggaggggacgccgccgcgcgccaaggtggacacc
atcctgctgcagtacgggctggtgaacggggggggagggaagaccacctcccgcctgcag
cccccgctgagccagtactccctgcaggccctgcgcccgggctcccgctatgaggtggct
gtcagcggcctgcgaggcaccaatgagagtgacgccgccctcacccacttcaccacagaa
atcgatgcccccaagaacgtgcgcgtgggagcccggacagcagccagccttgagctcgcc
tgggacaacagcgaggccgaggtgcacagctaccgcgtggtctacagcaccctggccggg
gagcagtaccacgaagtactggtgccccgcgacagtggtccgacgaccagagccaccctc
gcagatctggtgccagggactgagtacggcattgggatatcagccatcatggacaaccag
cagagtgtgccagccaccatgaatgccaggacagagctcgacagccctcgggacctcctg
gtgacagcctccacagagacatccatctccctggcctggacaaaggccagtgggcccatc
gaccactaccgcatcaccttcactccagcctcggggatggcctccgaagtgacggtgccc
cgagacaggtcacagctcactctctcagacctggagcccgggacagagtacaccatctcg
atcatagccgagcggggacgccagcagagcctggaatccactgtggatgcattcacagga
gtccggcccatcacacagctgcacttctctcacgtgacatcctccagcgtgaacatcacc
tggagcgacccatcaccaccagccgaccggctcatcctacagtatagcccacaggacaag
gaagaggcccagcagctcacactggacggcaccaggagacacgccagcctgacggggctg
cggccagccactgagtaccaagtgtcactggtggctgtgcatggcacaattagctcagag
cccatcgtgggctctataactacagggatcgacgctccaaaggacctcagggtaggaaat
gtgacccaggactccatgattgtctactggagccctcccattgccacttttgatcactac
agattatcgtaccaggcctccgaagggagaacagacaccaccgcaatccccagagatgcc
accgagtacaccctgctccgcctgcagcccgctaccgagtacgagatcaccatgaagagc
gtgcggggtcgcgaggagagcgagctggcctccctcactgcacacacagccatggatgcc
cccttgggtgtcactgccacgaatatcacccccaccgaggccctgctgcagtggaaccca
ccgctgtccgatgtggagaactacatcattgtcctcacccactacagagttgcaggagaa
acaattcttgtggatggagtcaaccaggagtaccagctgaccaaccttctccccagtact
acctacacagtcaccatgtatgctaccaatgggcctttcaccagccagaccatcagcacc
aactttacaactcttttggaccctccgacaaatctgactgcaagcgaagtcacccgacgg
agcgcccttctgtcctggatgcctccagtgggggagattgagaattacatcatgacctac
agatcaactgatggaagccggaaggagctgattgtggatgccgaagacacctggatccgc
ctggagggcctttcggagacaacagagtacaccgtgcgcctgcaggctgcccaaaacgcc
gtgcggagcggcttcacctccaccaccttcaccacaggcggtcgcgtctttgctaatcct
caggactgcgcccagcacctgctgaatggtgacacgctgagcggggtttacaccatctcc
gtcaacggcgaccttggccagaaggtgcaggtgtactgcgacatggccacggacggaggc
ggctggattgtattccagaggcggcagaatgggctgacagatttcttccggaagtgggca
gactaccggattggctttggaaacctggaagatgaattttggctgggcttggacaacatc
cacaagatcacctcccaggggcgctacgaactgcggatagacatgcgggacggccaggag
gcagcgtacgcctactacgacaagttctccatcggcgactccaggagtctgtacaagctc
cgaataggagaatacaacggcacctccggggattccctcacctatcaccaaggccgcccc
ttctccaccaaggacagggacaacgatgttgctgtgaccaactgtgccatgtcatacaaa
ggggcctggtggtacaagaactgccaccggaccaacctcaatggaaagtacggcgagtcc
cgtcacagtcaggggattaactggtaccattggaaaggccacgagttctccatacccttt
gtggaaatgaagatgcgaccctacaaccaccgtaacatctccgggaggaagcgacggtcc
ctacagctctga
DBGET
integrated database retrieval system
