Tinamus guttatus (white-throated tinamou): 104581227
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Entry
104581227 CDS
T08560
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04622
RIG-I-like receptor signaling pathway
tgt05164
Influenza A
tgt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104581227 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104581227 (IFIH1)
05168 Herpes simplex virus 1 infection
104581227 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tgt04054
]
104581227 (IFIH1)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104581227 (IFIH1)
Pattern recognition receptors [BR:
tgt04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104581227 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
CARD_2
CARD
SWI2_SNF2
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104581227
NCBI-ProteinID:
XP_010227100
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MRAVQVAEKCLQLDIFTVEDLERIQTATDNRGNREGARELLSRIVQKKDWFSGFLRALRE
TQHEDLADDLSGNTAGVENKENELSNSTNEEGEVTRQPGSAAVEDFKQQENMNDSSTSET
SVLESSFAEISVASESDVPIGDGSVNNVSENLGQSSSTTSDSDEDEEDSRVSPEPELILR
DYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKRASEPGKVIVLVNKVPLV
EQHLRKEFHPFLKRWYQVIGLSGDTQLKISFPEVVRRNDVIISTAQILENSLSHAAEEEE
ESVHLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNRKLAKENRPLILQPQILGLTA
SPGVGGATSHAKAVEHILKICANLDACRIMTVEEHASQLRNQVKEPYKKTVIADNKRRDP
FREKIIEIMTDIQNYCQLHPKSEFGTQPYEQWVIREEKKAAKEEKRKQRVCAEHLKKYND
ALQINDTVRMVDAYNHLRSFYKEEKSKKTVVSDDEDEPAVSKQDETDEFLIGLFYAKKKQ
LKRFAENPEYENETLTELRNTLMENFTKTSEPRGIIFTKTRHGASALFQWIKDNKKFEEV
GIKAQYLIGAGHNSETQPMTQNEQREVIDKFRDGRVNLLIATTVAEEGLDIKECNIVIRY
GLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNNFREKMMYKAIRSVQKMPQK
EYLEKIQTFQLQSLMEKKMKAKRDQCKTYKKNASLIKFLCKNCYKMVCSGEDIQVIENMH
HVSVKKDFQSLYHTRENKTLQEKHADYQTNGEITCKDCGQAWGNMMVHRGLDMPCLKIKN
FVVVFEDKKTRKDIFKKWGELPVRFPDFDYAGHYLSSDED
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgtgcaggtggctgagaagtgcctgcagttggacatcttcaccgtggaggac
ctggagcggatccagactgctactgataatcgtgggaatagagaaggtgcaagggagttg
ctaagtagaatagttcagaagaaggattggttctccgggtttctgagagccttgcgtgaa
acccaacacgaagaccttgcagatgacttaagtggaaatacagcaggagtagaaaataaa
gaaaatgagttgagtaacagtacaaatgaagaaggagaagtcacaaggcaaccaggaagt
gctgcagtggaggatttcaaacagcaagaaaatatgaacgatagttcaaccagtgagacc
agtgttttggaaagctcttttgcagagatttctgtagcttcagagtctgatgtccctata
ggggatggaagtgtcaataatgtgagtgaaaacctgggacagagcagcagcacaaccagt
gattcggatgaagatgaagaggacagcagagtttcacctgagccagaactgatcctgaga
gattaccagatggaagttgcaaaaccagcactgaatggggagaatattataatatgtctc
cctacaggcagtggtaaaactagagtggctgtttacattaccaaagatcacttggataag
aagaaaagagcatcagagcctggaaaagttatagtacttgttaataaggtcccgttggtg
gaacagcatttacgaaaggagtttcatcccttcttgaagcgctggtatcaggttattgga
ctaagtggtgatactcagctgaaaatctcatttcctgaggttgtcaggcgaaacgacgtc
attatcagcacagcgcagatcctggagaactcactatcacatgcagctgaggaagaggag
gaaagtgtccatttatcagatttttctcttatcattattgatgaatgtcatcacactcaa
aaggaaggggtctacaacaatataatgcgacgttacttaaaggaaaagatgaagaatagg
aagctggcaaaagaaaacagacctctcattctacagcctcagattctgggccttacagcc
tcacctggtgtaggaggtgcaacatcccatgcgaaagctgtagaacatattctgaaaatc
tgtgccaatcttgatgcatgtagaatcatgactgttgaagaacatgcctcccaactgagg
aatcaggtgaaggaaccatataagaagactgtgattgcagataacaaaagaagggatcca
tttagagagaaaattatcgagatcatgacagacattcaaaactattgccagctccatcca
aaatcggagtttggaactcagccgtacgagcagtgggtgattagagaggagaaaaaagcg
gcaaaagaagaaaaacgcaagcaacgtgtctgtgcagaacacttgaagaaatacaatgat
gctttgcaaataaatgacactgttcgaatggttgatgcatacaatcacctgcgtagcttt
tataaggaggaaaaaagcaaaaaaacagtagtgagtgatgatgaggatgaaccagcagta
tcaaaacaggacgaaactgatgaatttctaattggtttgttttatgcaaaaaagaaacag
ctgaaaaggtttgctgaaaatcccgaatatgaaaatgagacactaacagagttgcgaaac
actttaatggagaacttcacaaagaccagtgaaccgaggggaattattttcaccaagacc
cggcatggtgcttctgctctgttccagtggattaaagataacaaaaaatttgaagaagta
ggaattaaggcccaatatcttattggtgctgggcacaacagtgaaactcaacctatgact
cagaatgagcaaagggaagtaattgataaattccgagatggaagagtaaatttactcatt
gctactactgtagctgaggaaggcctagacatcaaggagtgcaacattgttattcgctat
ggccttgtcaccaatgaaattgctatggtgcaggctcgtggtcgagctcgagctgacgag
agcacctatgcccttgtggcttcaagtggctcaggagctgttgaacgtgaggatgttaat
aatttccgtgagaaaatgatgtataaggccattcggagtgtccagaagatgccacaaaaa
gagtacttggagaagattcagaccttccagttgcaaagtctaatggaaaaaaaaatgaag
gcaaaaagagatcagtgtaagacatataagaaaaatgcttcactaataaaattcctatgc
aaaaattgctacaagatggtatgttcaggagaggatatacaagttattgaaaatatgcat
catgtcagcgtgaaaaaagattttcaaagcctttaccatacaagagaaaataagacactg
caagaaaaacatgctgattaccagacaaatggggaaattacatgtaaagactgtggacaa
gcttggggaaatatgatggttcaccgaggtcttgacatgccttgtctaaagattaaaaat
tttgtggttgtgtttgaagacaagaaaacaagaaaagacatttttaagaaatggggagaa
ctgccagtccggttccctgattttgattatgcaggtcattatctttcaagtgatgaggat
tag
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